RNA–Protein interactions for RNA: ENST00000343483.6

HOXA9-201, Transcript of homeobox A9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXA9, Length 2,060 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA9-201ENST00000343483 KLHL20Q9Y2M5 609 aa17.72■□□□□ 0.43
HOXA9-201ENST00000343483 PRICKLE3O43900 615 aaPredicted RBP17.71■□□□□ 0.43
HOXA9-201ENST00000343483 HS6ST1O60243 411 aa17.71■□□□□ 0.43
HOXA9-201ENST00000343483 CLEC3AO75596 197 aa17.71■□□□□ 0.43
HOXA9-201ENST00000343483 ETFAP13804 333 aa17.71■□□□□ 0.43
HOXA9-201ENST00000343483 TPD52P55327 224 aaPredicted RBP17.71■□□□□ 0.43
HOXA9-201ENST00000343483 ABATP80404 500 aa17.71■□□□□ 0.43
HOXA9-201ENST00000343483 VEZF1Q14119 521 aa17.71■□□□□ 0.43
HOXA9-201ENST00000343483 HEPACAMQ14CZ8 416 aa17.71■□□□□ 0.43
HOXA9-201ENST00000343483 ALG11Q2TAA5 492 aa17.71■□□□□ 0.43
HOXA9-201ENST00000343483 KCTD8Q6ZWB6 473 aa17.71■□□□□ 0.43
HOXA9-201ENST00000343483 UBE3DQ7Z6J8 389 aa17.71■□□□□ 0.43
HOXA9-201ENST00000343483 ERI1Q8IV48 349 aaKnown RBP17.71■□□□□ 0.43
HOXA9-201ENST00000343483 ZDHHC21Q8IVQ6 265 aa17.71■□□□□ 0.43
HOXA9-201ENST00000343483 TTLQ8NG68 377 aa17.71■□□□□ 0.43
HOXA9-201ENST00000343483 PHF7Q9BWX1 381 aaPredicted RBP17.71■□□□□ 0.43
HOXA9-201ENST00000343483 TMEM121BQ9BXQ6 578 aaPredicted RBP17.71■□□□□ 0.43
HOXA9-201ENST00000343483 POLR1BQ9H9Y6 1135 aa17.71■□□□□ 0.43
HOXA9-201ENST00000343483 POLMQ9NP87 494 aaPredicted RBP17.71■□□□□ 0.43
HOXA9-201ENST00000343483 USP36Q9P275 1121 aaKnown RBP17.71■□□□□ 0.43
HOXA9-201ENST00000343483 ZNF624Q9P2J8 865 aaPredicted RBP17.71■□□□□ 0.43
HOXA9-201ENST00000343483 CYP8B1Q9UNU6 501 aa17.71■□□□□ 0.43
HOXA9-201ENST00000343483 GMEB1Q9Y692 573 aa17.71■□□□□ 0.43
HOXA9-201ENST00000343483 U3KQV3 271 aa17.71■□□□□ 0.43
HOXA9-201ENST00000343483 NUP214P35658 2090 aaPredicted RBP17.71■□□□□ 0.43
HOXA9-201ENST00000343483 LRIT2A6NDA9 550 aa17.71■□□□□ 0.43
HOXA9-201ENST00000343483 TNFRSF10CO14798 259 aa17.71■□□□□ 0.43
HOXA9-201ENST00000343483 PPM1DO15297 605 aa17.71■□□□□ 0.43
HOXA9-201ENST00000343483 TMPRSS11DO60235 418 aa17.71■□□□□ 0.43
HOXA9-201ENST00000343483 PRKACGP22612 351 aa17.71■□□□□ 0.43
HOXA9-201ENST00000343483 EEF1B2P24534 225 aaKnown RBP17.71■□□□□ 0.43
HOXA9-201ENST00000343483 NDUFS1P28331 727 aa17.71■□□□□ 0.43
HOXA9-201ENST00000343483 SSR2P43308 183 aa17.71■□□□□ 0.43
HOXA9-201ENST00000343483 PMS2P3Q13401 168 aa17.71■□□□□ 0.43
HOXA9-201ENST00000343483 VTCN1Q7Z7D3 282 aa17.71■□□□□ 0.43
HOXA9-201ENST00000343483 AMBRA1Q9C0C7 1298 aa17.71■□□□□ 0.43
HOXA9-201ENST00000343483 TMEM184CQ9NVA4 438 aa17.71■□□□□ 0.43
HOXA9-201ENST00000343483 GPATCH2Q9NW75 528 aa17.71■□□□□ 0.43
HOXA9-201ENST00000343483 C5AR2Q9P296 337 aa17.71■□□□□ 0.43
HOXA9-201ENST00000343483 MAP4K5Q9Y4K4 846 aa17.71■□□□□ 0.43
HOXA9-201ENST00000343483 SNX8Q9Y5X2 465 aa17.71■□□□□ 0.43
HOXA9-201ENST00000343483 FKBP9O95302 570 aa17.7■□□□□ 0.42
HOXA9-201ENST00000343483 CHRM5P08912 532 aaPredicted RBP17.7■□□□□ 0.42
HOXA9-201ENST00000343483 CALRP27797 417 aaKnown RBP17.7■□□□□ 0.42
HOXA9-201ENST00000343483 CMPK1P30085 196 aa17.7■□□□□ 0.42
HOXA9-201ENST00000343483 MAGEA2P43356 314 aa17.7■□□□□ 0.42
HOXA9-201ENST00000343483 MVDP53602 400 aa17.7■□□□□ 0.42
HOXA9-201ENST00000343483 ZP2Q05996 745 aa17.7■□□□□ 0.42
HOXA9-201ENST00000343483 KIAA1614Q5VZ46 1190 aa17.7■□□□□ 0.42
HOXA9-201ENST00000343483 OR4C11Q6IEV9 310 aa17.7■□□□□ 0.42
HOXA9-201ENST00000343483 WASH2PQ6VEQ5 465 aa17.7■□□□□ 0.42
HOXA9-201ENST00000343483 HIPK1Q86Z02 1210 aa17.7■□□□□ 0.42
HOXA9-201ENST00000343483 C11orf65Q8NCR3 313 aa17.7■□□□□ 0.42
HOXA9-201ENST00000343483 ISOC1Q96CN7 298 aa17.7■□□□□ 0.42
HOXA9-201ENST00000343483 MSANTD3Q96H12 275 aa17.7■□□□□ 0.42
HOXA9-201ENST00000343483 TEFMQ96QE5 360 aaKnown RBP17.7■□□□□ 0.42
HOXA9-201ENST00000343483 LTB4R2Q9NPC1 389 aa17.7■□□□□ 0.42
HOXA9-201ENST00000343483 OR6C2Q9NZP2 312 aa17.7■□□□□ 0.42
HOXA9-201ENST00000343483 B4GAT1O43505 415 aa17.7■□□□□ 0.42
HOXA9-201ENST00000343483 PCGF2P35227 344 aa17.7■□□□□ 0.42
HOXA9-201ENST00000343483 PIGAP37287 484 aa17.7■□□□□ 0.42
HOXA9-201ENST00000343483 YPEL5P62699 121 aa17.7■□□□□ 0.42
HOXA9-201ENST00000343483 KCNAB2Q13303 367 aa17.7■□□□□ 0.42
HOXA9-201ENST00000343483 RAB39AQ14964 217 aa17.7■□□□□ 0.42
HOXA9-201ENST00000343483 SLC5A12Q1EHB4 618 aa17.7■□□□□ 0.42
HOXA9-201ENST00000343483 ZNF773Q6PK81 442 aa17.7■□□□□ 0.42
HOXA9-201ENST00000343483 RNF130Q86XS8 419 aa17.7■□□□□ 0.42
HOXA9-201ENST00000343483 AMER3Q8N944 861 aa17.7■□□□□ 0.42
HOXA9-201ENST00000343483 OR13H1Q8NG92 308 aa17.7■□□□□ 0.42
HOXA9-201ENST00000343483 OR52N2Q8NGI0 321 aa17.7■□□□□ 0.42
HOXA9-201ENST00000343483 TOE1Q96GM8 510 aaKnown RBP17.7■□□□□ 0.42
HOXA9-201ENST00000343483 TPD52L3Q96J77 140 aa17.7■□□□□ 0.42
HOXA9-201ENST00000343483 HSH2DQ96JZ2 352 aa17.7■□□□□ 0.42
HOXA9-201ENST00000343483 ADNPQ9H2P0 1102 aa17.7■□□□□ 0.42
HOXA9-201ENST00000343483 SRMSQ9H3Y6 488 aa17.7■□□□□ 0.42
HOXA9-201ENST00000343483 KLHL31Q9H511 634 aa17.7■□□□□ 0.42
HOXA9-201ENST00000343483 CXorf21Q9HAI6 301 aa17.7■□□□□ 0.42
HOXA9-201ENST00000343483 TEX10Q9NXF1 929 aaPredicted RBP17.7■□□□□ 0.42
HOXA9-201ENST00000343483 C3orf18Q9UK00 162 aa17.7■□□□□ 0.42
HOXA9-201ENST00000343483 WBP11Q9Y2W2 641 aaKnown RBP17.7■□□□□ 0.42
HOXA9-201ENST00000343483 CUL9Q8IWT3 2517 aa17.69■□□□□ 0.42
HOXA9-201ENST00000343483 hCG_2039718K7EN88 272 aa17.69■□□□□ 0.42
HOXA9-201ENST00000343483 IGHV4-34P06331 123 aa17.69■□□□□ 0.42
HOXA9-201ENST00000343483 SRFP11831 508 aa17.69■□□□□ 0.42
HOXA9-201ENST00000343483 TTKP33981 857 aa17.69■□□□□ 0.42
HOXA9-201ENST00000343483 DGKEP52429 567 aa17.69■□□□□ 0.42
HOXA9-201ENST00000343483 NEDD8Q15843 81 aa17.69■□□□□ 0.42
HOXA9-201ENST00000343483 CBLL1Q75N03 491 aa17.69■□□□□ 0.42
HOXA9-201ENST00000343483 EIF3MQ7L2H7 374 aaKnown RBP17.69■□□□□ 0.42
HOXA9-201ENST00000343483 TBC1D19Q8N5T2 526 aa17.69■□□□□ 0.42
HOXA9-201ENST00000343483 ARL10Q8N8L6 244 aa17.69■□□□□ 0.42
HOXA9-201ENST00000343483 EXOSC8Q96B26 276 aaKnown RBP17.69■□□□□ 0.42
HOXA9-201ENST00000343483 COL25A1Q9BXS0 654 aaPredicted RBP17.69■□□□□ 0.42
HOXA9-201ENST00000343483 AICDAQ9GZX7 198 aa17.69■□□□□ 0.42
HOXA9-201ENST00000343483 DDX31Q9H8H2 851 aaKnown RBP17.69■□□□□ 0.42
HOXA9-201ENST00000343483 IL1RAPQ9NPH3 570 aa17.69■□□□□ 0.42
HOXA9-201ENST00000343483 VNN3Q9NY84 501 aa17.69■□□□□ 0.42
HOXA9-201ENST00000343483 ADAM29Q9UKF5 820 aa17.69■□□□□ 0.42
HOXA9-201ENST00000343483 PCOLCE2Q9UKZ9 415 aa17.69■□□□□ 0.42
HOXA9-201ENST00000343483 ABCG2Q9UNQ0 655 aa17.69■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 536.6 ms