RNA–Protein interactions for RNA: ENST00000343257.6

CLCN1-201, Transcript of chloride voltage-gated channel 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLCN1, Length 3,172 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN1-201ENST00000343257 PDPK1O15530 556 aa14.23□□□□□ -0.13
CLCN1-201ENST00000343257 HOXB6P17509 224 aaKnown RBP14.23□□□□□ -0.13
CLCN1-201ENST00000343257 SGSHP51688 502 aa14.23□□□□□ -0.13
CLCN1-201ENST00000343257 KHDRBS1Q07666 443 aaKnown RBP eCLIP14.23□□□□□ -0.13
CLCN1-201ENST00000343257 DBPQ10586 325 aaPredicted RBP14.23□□□□□ -0.13
CLCN1-201ENST00000343257 CHIT1Q13231 466 aa14.23□□□□□ -0.13
CLCN1-201ENST00000343257 BCL2L15Q5TBC7 163 aa14.23□□□□□ -0.13
CLCN1-201ENST00000343257 MZT2BQ6NZ67 158 aa14.23□□□□□ -0.13
CLCN1-201ENST00000343257 CARNMT1Q8N4J0 409 aa14.23□□□□□ -0.13
CLCN1-201ENST00000343257 POF1BQ8WVV4 589 aa14.23□□□□□ -0.13
CLCN1-201ENST00000343257 BTN2A2Q8WVV5 523 aa14.23□□□□□ -0.13
CLCN1-201ENST00000343257 CMTM7Q96FZ5 175 aa14.23□□□□□ -0.13
CLCN1-201ENST00000343257 ACER3Q9NUN7 267 aa14.23□□□□□ -0.13
CLCN1-201ENST00000343257 RBFOX1Q9NWB1 397 aaKnown RBP14.23□□□□□ -0.13
CLCN1-201ENST00000343257 RIMKLBQ9ULI2 386 aa14.23□□□□□ -0.13
CLCN1-201ENST00000343257 SCML1Q9UN30 329 aa14.23□□□□□ -0.13
CLCN1-201ENST00000343257 PADI2Q9Y2J8 665 aa14.23□□□□□ -0.13
CLCN1-201ENST00000343257 POLR2AP24928 1970 aaKnown RBP14.23□□□□□ -0.13
CLCN1-201ENST00000343257 IGLV3-10A0A075B6K4 115 aa14.23□□□□□ -0.13
CLCN1-201ENST00000343257 PRPS1L1P21108 318 aa14.23□□□□□ -0.13
CLCN1-201ENST00000343257 MAPK1P28482 360 aa14.23□□□□□ -0.13
CLCN1-201ENST00000343257 YBEYP58557 167 aaPredicted RBP14.23□□□□□ -0.13
CLCN1-201ENST00000343257 MGAT3Q09327 533 aa14.23□□□□□ -0.13
CLCN1-201ENST00000343257 RPA4Q13156 261 aa14.23□□□□□ -0.13
CLCN1-201ENST00000343257 TSTA3Q13630 321 aaPredicted RBP14.23□□□□□ -0.13
CLCN1-201ENST00000343257 ZBTB37Q5TC79 503 aa14.23□□□□□ -0.13
CLCN1-201ENST00000343257 RIT1Q92963 219 aa14.23□□□□□ -0.13
CLCN1-201ENST00000343257 WDFY2Q96P53 400 aa14.23□□□□□ -0.13
CLCN1-201ENST00000343257 DCLRE1CQ96SD1 692 aaKnown RBP14.23□□□□□ -0.13
CLCN1-201ENST00000343257 SLC32A1Q9H598 525 aa14.23□□□□□ -0.13
CLCN1-201ENST00000343257 TMEM161AQ9NX61 479 aa14.23□□□□□ -0.13
CLCN1-201ENST00000343257 PRG3Q9Y2Y8 225 aaPredicted RBP14.23□□□□□ -0.13
CLCN1-201ENST00000343257 FCF1Q9Y324 198 aaKnown RBP14.23□□□□□ -0.13
CLCN1-201ENST00000343257 TRBV4-1A0A0J9YWV2 114 aa14.22□□□□□ -0.13
CLCN1-201ENST00000343257 MBLAC1A4D2B0 266 aaPredicted RBP14.22□□□□□ -0.13
CLCN1-201ENST00000343257 TLX2O43763 284 aaPredicted RBP14.22□□□□□ -0.13
CLCN1-201ENST00000343257 AKAP8O43823 692 aaKnown RBP14.22□□□□□ -0.13
CLCN1-201ENST00000343257 PSEN2P49810 448 aa14.22□□□□□ -0.13
CLCN1-201ENST00000343257 ZNF91Q05481 1191 aa14.22□□□□□ -0.13
CLCN1-201ENST00000343257 BCL2L1Q07817 233 aa14.22□□□□□ -0.13
CLCN1-201ENST00000343257 CPTPQ5TA50 214 aa14.22□□□□□ -0.13
CLCN1-201ENST00000343257 TMEM65Q6PI78 240 aa14.22□□□□□ -0.13
CLCN1-201ENST00000343257 CD300LGQ6UXG3 332 aa14.22□□□□□ -0.13
CLCN1-201ENST00000343257 UBE2R2Q712K3 238 aaPredicted RBP14.22□□□□□ -0.13
CLCN1-201ENST00000343257 ZNF680Q8NEM1 530 aa14.22□□□□□ -0.13
CLCN1-201ENST00000343257 SLC29A3Q9BZD2 475 aa14.22□□□□□ -0.13
CLCN1-201ENST00000343257 BEX1Q9HBH7 125 aa14.22□□□□□ -0.13
CLCN1-201ENST00000343257 ASIC5Q9NY37 505 aa14.22□□□□□ -0.13
CLCN1-201ENST00000343257 B3GNT2Q9NY97 397 aa14.22□□□□□ -0.13
CLCN1-201ENST00000343257 FLRT1Q9NZU1 646 aa14.22□□□□□ -0.13
CLCN1-201ENST00000343257 IL17CQ9P0M4 197 aa14.22□□□□□ -0.13
CLCN1-201ENST00000343257 FNIP2Q9P278 1114 aa14.22□□□□□ -0.13
CLCN1-201ENST00000343257 EIF3KQ9UBQ5 218 aaKnown RBP14.22□□□□□ -0.13
CLCN1-201ENST00000343257 CCDC88CQ9P219 2028 aa14.22□□□□□ -0.13
CLCN1-201ENST00000343257 IQCMA0A1B0GVH7 501 aa14.22□□□□□ -0.13
CLCN1-201ENST00000343257 GNG14A0A1W2PPG7 69 aa14.22□□□□□ -0.13
CLCN1-201ENST00000343257 BNIP3LO60238 219 aa14.22□□□□□ -0.13
CLCN1-201ENST00000343257 IRF1P10914 325 aa14.22□□□□□ -0.13
CLCN1-201ENST00000343257 AGFG1P52594 562 aaKnown RBP14.22□□□□□ -0.13
CLCN1-201ENST00000343257 ABATP80404 500 aa14.22□□□□□ -0.13
CLCN1-201ENST00000343257 RBBP4Q09028 425 aa14.22□□□□□ -0.13
CLCN1-201ENST00000343257 SCARB2Q14108 478 aa14.22□□□□□ -0.13
CLCN1-201ENST00000343257 GHDCQ8N2G8 530 aa14.22□□□□□ -0.13
CLCN1-201ENST00000343257 FAM46DQ8NEK8 389 aa14.22□□□□□ -0.13
CLCN1-201ENST00000343257 KATNB1Q9BVA0 655 aa14.22□□□□□ -0.13
CLCN1-201ENST00000343257 GTPBP2Q9BX10 602 aaKnown RBP14.22□□□□□ -0.13
CLCN1-201ENST00000343257 MRPL9Q9BYD2 267 aaKnown RBP14.22□□□□□ -0.13
CLCN1-201ENST00000343257 NOD1Q9Y239 953 aa14.22□□□□□ -0.13
CLCN1-201ENST00000343257 LSM2Q9Y333 95 aaKnown RBP14.22□□□□□ -0.13
CLCN1-201ENST00000343257 GSAPA4D1B5 854 aa14.22□□□□□ -0.13
CLCN1-201ENST00000343257 DRGXA6NNA5 263 aa14.22□□□□□ -0.13
CLCN1-201ENST00000343257 CLDN7O95471 211 aa14.22□□□□□ -0.13
CLCN1-201ENST00000343257 GLULP15104 373 aa14.22□□□□□ -0.13
CLCN1-201ENST00000343257 SOAT1P35610 550 aa14.22□□□□□ -0.13
CLCN1-201ENST00000343257 ETV5P41161 510 aa14.22□□□□□ -0.13
CLCN1-201ENST00000343257 ETV1P50549 477 aa14.22□□□□□ -0.13
CLCN1-201ENST00000343257 TAGLNQ01995 201 aaKnown RBP14.22□□□□□ -0.13
CLCN1-201ENST00000343257 ACSM2AQ08AH3 577 aa14.22□□□□□ -0.13
CLCN1-201ENST00000343257 C1DQ13901 141 aaKnown RBP14.22□□□□□ -0.13
CLCN1-201ENST00000343257 VEZF1Q14119 521 aa14.22□□□□□ -0.13
CLCN1-201ENST00000343257 FRG2Q64ET8 278 aa14.22□□□□□ -0.13
CLCN1-201ENST00000343257 ACSM2BQ68CK6 577 aa14.22□□□□□ -0.13
CLCN1-201ENST00000343257 HJURPQ8NCD3 748 aaPredicted RBP14.22□□□□□ -0.13
CLCN1-201ENST00000343257 AKAP1Q92667 903 aaKnown RBP eCLIP14.22□□□□□ -0.13
CLCN1-201ENST00000343257 FRG2BQ96QU4 278 aa14.22□□□□□ -0.13
CLCN1-201ENST00000343257 SEPT5Q99719 369 aaPredicted RBP14.22□□□□□ -0.13
CLCN1-201ENST00000343257 TEX46H3BTG2 121 aa14.21□□□□□ -0.13
CLCN1-201ENST00000343257 SAP18O00422 153 aaKnown RBP14.21□□□□□ -0.13
CLCN1-201ENST00000343257 ORC5O43913 435 aa14.21□□□□□ -0.13
CLCN1-201ENST00000343257 OR10H3O60404 316 aa14.21□□□□□ -0.13
CLCN1-201ENST00000343257 TOXO94900 526 aa14.21□□□□□ -0.13
CLCN1-201ENST00000343257 ARHGEF15O94989 841 aa14.21□□□□□ -0.13
CLCN1-201ENST00000343257 RHOCP08134 193 aa14.21□□□□□ -0.13
CLCN1-201ENST00000343257 PRKACAP17612 351 aa14.21□□□□□ -0.13
CLCN1-201ENST00000343257 PER3P56645 1201 aa14.21□□□□□ -0.13
CLCN1-201ENST00000343257 SRP54P61011 504 aaKnown RBP14.21□□□□□ -0.13
CLCN1-201ENST00000343257 SRSF11Q05519 484 aaKnown RBP14.21□□□□□ -0.13
CLCN1-201ENST00000343257 BOP1Q14137 746 aaKnown RBP14.21□□□□□ -0.13
CLCN1-201ENST00000343257 HMGN2P46Q86SG4 172 aa14.21□□□□□ -0.13
CLCN1-201ENST00000343257 GPRC5AQ8NFJ5 357 aa14.21□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms