RNA–Protein interactions for RNA: ENST00000342785.8

VCAN-202, Transcript of versican, humanhuman

TSL 1 (best) BASIC

Gene VCAN, Length 7,154 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-202ENST00000342785 EIPR1Q53HC9 387 aa6.9□□□□□ -1.3
VCAN-202ENST00000342785 MPP7Q5T2T1 576 aa6.9□□□□□ -1.3
VCAN-202ENST00000342785 CES4AQ5XG92 561 aa6.9□□□□□ -1.3
VCAN-202ENST00000342785 MEIOBQ8N635 442 aa6.9□□□□□ -1.3
VCAN-202ENST00000342785 CHDHQ8NE62 594 aaPredicted RBP6.9□□□□□ -1.3
VCAN-202ENST00000342785 OR52N2Q8NGI0 321 aa6.9□□□□□ -1.3
VCAN-202ENST00000342785 MCHR1Q99705 422 aa6.9□□□□□ -1.3
VCAN-202ENST00000342785 MND1Q9BWT6 205 aa6.9□□□□□ -1.3
VCAN-202ENST00000342785 MED28Q9H204 178 aa6.9□□□□□ -1.3
VCAN-202ENST00000342785 PLAC1Q9HBJ0 212 aa6.9□□□□□ -1.3
VCAN-202ENST00000342785 ENPP4Q9Y6X5 453 aa6.9□□□□□ -1.3
VCAN-202ENST00000342785 SLC2A2P11168 524 aaPredicted RBP6.9□□□□□ -1.3
VCAN-202ENST00000342785 GDI1P31150 447 aa6.9□□□□□ -1.3
VCAN-202ENST00000342785 OMPP47874 163 aa6.9□□□□□ -1.3
VCAN-202ENST00000342785 NTHL1P78549 312 aa6.9□□□□□ -1.3
VCAN-202ENST00000342785 RGNQ15493 299 aa6.9□□□□□ -1.3
VCAN-202ENST00000342785 SPHARQ15513 63 aa6.9□□□□□ -1.3
VCAN-202ENST00000342785 SLC14A2Q15849 920 aa6.9□□□□□ -1.3
VCAN-202ENST00000342785 CCDC157Q569K6 752 aa6.9□□□□□ -1.3
VCAN-202ENST00000342785 NXPE4Q6UWF7 544 aa6.9□□□□□ -1.3
VCAN-202ENST00000342785 SBSNQ6UWP8 590 aa6.9□□□□□ -1.3
VCAN-202ENST00000342785 PRSS48Q7RTY5 328 aa6.9□□□□□ -1.3
VCAN-202ENST00000342785 CASD1Q96PB1 797 aa6.9□□□□□ -1.3
VCAN-202ENST00000342785 ZDHHC4Q9NPG8 344 aa6.9□□□□□ -1.3
VCAN-202ENST00000342785 NECTIN3Q9NQS3 549 aa6.9□□□□□ -1.3
VCAN-202ENST00000342785 GPR83Q9NYM4 423 aa6.9□□□□□ -1.3
VCAN-202ENST00000342785 BTAF1O14981 1849 aa6.9□□□□□ -1.3
VCAN-202ENST00000342785 COL4A1P02462 1669 aa6.9□□□□□ -1.31
VCAN-202ENST00000342785 SCN7AQ01118 1682 aa6.9□□□□□ -1.31
VCAN-202ENST00000342785 ATE1O95260 518 aa6.9□□□□□ -1.31
VCAN-202ENST00000342785 RLN1P04808 185 aa6.9□□□□□ -1.31
VCAN-202ENST00000342785 OR12D1P0DN82 309 aa6.9□□□□□ -1.31
VCAN-202ENST00000342785 ZNF45Q02386 682 aa6.9□□□□□ -1.31
VCAN-202ENST00000342785 MLLT1Q03111 559 aaPredicted RBP6.9□□□□□ -1.31
VCAN-202ENST00000342785 GPM6BQ13491 265 aa6.9□□□□□ -1.31
VCAN-202ENST00000342785 DHCR24Q15392 516 aa6.9□□□□□ -1.31
VCAN-202ENST00000342785 TOR1AIP1Q5JTV8 583 aa6.9□□□□□ -1.31
VCAN-202ENST00000342785 HSDL2Q6YN16 418 aa6.9□□□□□ -1.31
VCAN-202ENST00000342785 HMGN2P46Q86SG4 172 aa6.9□□□□□ -1.31
VCAN-202ENST00000342785 C12orf76Q8N812 135 aaPredicted RBP6.9□□□□□ -1.31
VCAN-202ENST00000342785 SLC22A12Q96S37 553 aa6.9□□□□□ -1.31
VCAN-202ENST00000342785 POLE4Q9NR33 117 aa6.9□□□□□ -1.31
VCAN-202ENST00000342785 FAIMQ9NVQ4 179 aa6.9□□□□□ -1.31
VCAN-202ENST00000342785 SBK3P0C264 359 aa6.9□□□□□ -1.31
VCAN-202ENST00000342785 CST5P28325 142 aaPredicted RBP6.9□□□□□ -1.31
VCAN-202ENST00000342785 CTSCP53634 463 aa6.9□□□□□ -1.31
VCAN-202ENST00000342785 GSTM4Q03013 218 aa6.9□□□□□ -1.31
VCAN-202ENST00000342785 TRAM2Q15035 370 aa6.9□□□□□ -1.31
VCAN-202ENST00000342785 ADGRD2Q7Z7M1 963 aa6.9□□□□□ -1.31
VCAN-202ENST00000342785 ZBTB8BQ8NAP8 495 aaPredicted RBP6.9□□□□□ -1.31
VCAN-202ENST00000342785 P2RY13Q9BPV8 354 aa6.9□□□□□ -1.31
VCAN-202ENST00000342785 SLC2A11Q9BYW1 496 aa6.9□□□□□ -1.31
VCAN-202ENST00000342785 LHX3Q9UBR4 397 aa6.9□□□□□ -1.31
VCAN-202ENST00000342785 HEBP2Q9Y5Z4 205 aa6.9□□□□□ -1.31
VCAN-202ENST00000342785 COL16A1Q07092 1604 aaPredicted RBP6.9□□□□□ -1.31
VCAN-202ENST00000342785 CSF2P04141 144 aa6.89□□□□□ -1.31
VCAN-202ENST00000342785 MATN1P21941 496 aa6.89□□□□□ -1.31
VCAN-202ENST00000342785 CRHBPP24387 322 aa6.89□□□□□ -1.31
VCAN-202ENST00000342785 MNDAP41218 407 aa6.89□□□□□ -1.31
VCAN-202ENST00000342785 ZNF33BQ06732 778 aa6.89□□□□□ -1.31
VCAN-202ENST00000342785 PROX2Q3B8N5 592 aa6.89□□□□□ -1.31
VCAN-202ENST00000342785 FAM180BQ6P0A1 224 aa6.89□□□□□ -1.31
VCAN-202ENST00000342785 FRRS1Q6ZNA5 592 aa6.89□□□□□ -1.31
VCAN-202ENST00000342785 SLC39A11Q8N1S5 342 aa6.89□□□□□ -1.31
VCAN-202ENST00000342785 ZNF548Q8NEK5 533 aaPredicted RBP6.89□□□□□ -1.31
VCAN-202ENST00000342785 OR6K6Q8NGW6 343 aa6.89□□□□□ -1.31
VCAN-202ENST00000342785 ASB11Q8WXH4 323 aa6.89□□□□□ -1.31
VCAN-202ENST00000342785 ZSCAN32Q9NX65 697 aa6.89□□□□□ -1.31
VCAN-202ENST00000342785 AKAP7Q9P0M2 348 aaPredicted RBP6.89□□□□□ -1.31
VCAN-202ENST00000342785 KLHL42Q9P2K6 505 aa6.89□□□□□ -1.31
VCAN-202ENST00000342785 NHSL1Q5SYE7 1610 aa6.89□□□□□ -1.31
VCAN-202ENST00000342785 DDX60Q8IY21 1712 aaKnown RBP6.89□□□□□ -1.31
VCAN-202ENST00000342785 MYH9P35579 1960 aaKnown RBP6.89□□□□□ -1.31
VCAN-202ENST00000342785 SCN9AQ15858 1988 aa6.89□□□□□ -1.31
VCAN-202ENST00000342785 CLCA1A8K7I4 914 aa6.89□□□□□ -1.31
VCAN-202ENST00000342785 ALPLP05186 524 aa6.89□□□□□ -1.31
VCAN-202ENST00000342785 PSKH1P11801 424 aa6.89□□□□□ -1.31
VCAN-202ENST00000342785 RHCEP18577 417 aa6.89□□□□□ -1.31
VCAN-202ENST00000342785 OPRL1P41146 370 aa6.89□□□□□ -1.31
VCAN-202ENST00000342785 RHAGQ02094 409 aa6.89□□□□□ -1.31
VCAN-202ENST00000342785 NFE2L1Q14494 772 aa6.89□□□□□ -1.31
VCAN-202ENST00000342785 ANKDD1AQ495B1 522 aa6.89□□□□□ -1.31
VCAN-202ENST00000342785 CATSPEREQ5SY80 951 aa6.89□□□□□ -1.31
VCAN-202ENST00000342785 ADNP2Q6IQ32 1131 aa6.89□□□□□ -1.31
VCAN-202ENST00000342785 ASB18Q6ZVZ8 466 aa6.89□□□□□ -1.31
VCAN-202ENST00000342785 SPRED1Q7Z699 444 aa6.89□□□□□ -1.31
VCAN-202ENST00000342785 GHDCQ8N2G8 530 aa6.89□□□□□ -1.31
VCAN-202ENST00000342785 OR2T11Q8NH01 316 aa6.89□□□□□ -1.31
VCAN-202ENST00000342785 ZNF296Q8WUU4 475 aaPredicted RBP6.89□□□□□ -1.31
VCAN-202ENST00000342785 TMEM19Q96HH6 336 aa6.89□□□□□ -1.31
VCAN-202ENST00000342785 SPATA9Q9BWV2 254 aa6.89□□□□□ -1.31
VCAN-202ENST00000342785 RACGAP1Q9H0H5 632 aa6.89□□□□□ -1.31
VCAN-202ENST00000342785 AGR2O95994 175 aa6.89□□□□□ -1.31
VCAN-202ENST00000342785 ASGR2P07307 311 aa6.89□□□□□ -1.31
VCAN-202ENST00000342785 C6P13671 934 aa6.89□□□□□ -1.31
VCAN-202ENST00000342785 FSHRP23945 695 aa6.89□□□□□ -1.31
VCAN-202ENST00000342785 DCKP27707 260 aa6.89□□□□□ -1.31
VCAN-202ENST00000342785 NUP62P37198 522 aaPredicted RBP6.89□□□□□ -1.31
VCAN-202ENST00000342785 VIPR2P41587 438 aa6.89□□□□□ -1.31
VCAN-202ENST00000342785 EIF4HQ15056 248 aaKnown RBP6.89□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms