RNA–Protein interactions for RNA: ENST00000342415.5

SNRNP48-201, Transcript of small nuclear ribonucleoprotein U11/U12 subunit 48, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNRNP48, Length 4,173 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP48-201ENST00000342415 NTN4Q9HB63 628 aa11.93□□□□□ -0.5
SNRNP48-201ENST00000342415 SMURF1Q9HCE7 757 aa11.93□□□□□ -0.5
SNRNP48-201ENST00000342415 TMEM138Q9NPI0 162 aa11.93□□□□□ -0.5
SNRNP48-201ENST00000342415 NLKQ9UBE8 527 aa11.93□□□□□ -0.5
SNRNP48-201ENST00000342415 IFT52Q9Y366 437 aa11.93□□□□□ -0.5
SNRNP48-201ENST00000342415 IQCMA0A1B0GVH7 501 aa11.92□□□□□ -0.5
SNRNP48-201ENST00000342415 FEZF1A0PJY2 475 aa11.92□□□□□ -0.5
SNRNP48-201ENST00000342415 ASPDHA6ND91 283 aa11.92□□□□□ -0.5
SNRNP48-201ENST00000342415 AGAP5A6NIR3 686 aa11.92□□□□□ -0.5
SNRNP48-201ENST00000342415 TAPBPO15533 448 aa11.92□□□□□ -0.5
SNRNP48-201ENST00000342415 ADAM23O75077 832 aa11.92□□□□□ -0.5
SNRNP48-201ENST00000342415 PTHP01270 115 aa11.92□□□□□ -0.5
SNRNP48-201ENST00000342415 ACP5P13686 325 aa11.92□□□□□ -0.5
SNRNP48-201ENST00000342415 TYRP14679 529 aa11.92□□□□□ -0.5
SNRNP48-201ENST00000342415 ATF6P18850 670 aa11.92□□□□□ -0.5
SNRNP48-201ENST00000342415 TIA1P31483 386 aaKnown RBP eCLIP11.92□□□□□ -0.5
SNRNP48-201ENST00000342415 CLCNKAP51800 687 aa11.92□□□□□ -0.5
SNRNP48-201ENST00000342415 CAV3P56539 151 aa11.92□□□□□ -0.5
SNRNP48-201ENST00000342415 DCDC1P59894 354 aa11.92□□□□□ -0.5
SNRNP48-201ENST00000342415 TBPL1P62380 186 aa11.92□□□□□ -0.5
SNRNP48-201ENST00000342415 TLE2Q04725 743 aa11.92□□□□□ -0.5
SNRNP48-201ENST00000342415 SLC3A1Q07837 685 aa11.92□□□□□ -0.5
SNRNP48-201ENST00000342415 COMMD6Q7Z4G1 85 aa11.92□□□□□ -0.5
SNRNP48-201ENST00000342415 MMAAQ8IVH4 418 aaKnown RBP11.92□□□□□ -0.5
SNRNP48-201ENST00000342415 LILRA3Q8N6C8 439 aaPredicted RBP11.92□□□□□ -0.5
SNRNP48-201ENST00000342415 TEX26Q8N6G2 289 aa11.92□□□□□ -0.5
SNRNP48-201ENST00000342415 TMEM80Q96HE8 168 aa11.92□□□□□ -0.5
SNRNP48-201ENST00000342415 SYNDIG1Q9H7V2 258 aa11.92□□□□□ -0.5
SNRNP48-201ENST00000342415 ZNF224Q9NZL3 707 aa11.92□□□□□ -0.5
SNRNP48-201ENST00000342415 C2orf92A0A1B0GVN3 265 aa11.92□□□□□ -0.5
SNRNP48-201ENST00000342415 ABHD14A-ACY1A0A1B0GW23 586 aa11.92□□□□□ -0.5
SNRNP48-201ENST00000342415 FRS3O43559 492 aa11.92□□□□□ -0.5
SNRNP48-201ENST00000342415 DNAJB5O75953 348 aa11.92□□□□□ -0.5
SNRNP48-201ENST00000342415 PRLP01236 227 aa11.92□□□□□ -0.5
SNRNP48-201ENST00000342415 LAMP2P13473 410 aa11.92□□□□□ -0.5
SNRNP48-201ENST00000342415 CLK3P49761 638 aaKnown RBP11.92□□□□□ -0.5
SNRNP48-201ENST00000342415 PTGES3Q15185 160 aaKnown RBP11.92□□□□□ -0.5
SNRNP48-201ENST00000342415 GPR68Q15743 365 aa11.92□□□□□ -0.5
SNRNP48-201ENST00000342415 POMZP3Q6PJE2 187 aa11.92□□□□□ -0.5
SNRNP48-201ENST00000342415 NRARPQ7Z6K4 114 aa11.92□□□□□ -0.5
SNRNP48-201ENST00000342415 TFGQ92734 400 aaPredicted RBP11.92□□□□□ -0.5
SNRNP48-201ENST00000342415 MAPKAP1Q9BPZ7 522 aa11.92□□□□□ -0.5
SNRNP48-201ENST00000342415 RACGAP1Q9H0H5 632 aa11.92□□□□□ -0.5
SNRNP48-201ENST00000342415 SLC6A13Q9NSD5 602 aa11.92□□□□□ -0.5
SNRNP48-201ENST00000342415 TCRBV5S2A0A599 114 aa11.92□□□□□ -0.5
SNRNP48-201ENST00000342415 TOXO94900 526 aa11.92□□□□□ -0.5
SNRNP48-201ENST00000342415 YES1P07947 543 aa11.92□□□□□ -0.5
SNRNP48-201ENST00000342415 CBSLP0DN79 551 aa11.92□□□□□ -0.5
SNRNP48-201ENST00000342415 AMD1P17707 334 aa11.92□□□□□ -0.5
SNRNP48-201ENST00000342415 CBSP35520 551 aa11.92□□□□□ -0.5
SNRNP48-201ENST00000342415 ZNF181Q2M3W8 571 aa11.92□□□□□ -0.5
SNRNP48-201ENST00000342415 XKR7Q5GH72 579 aa11.92□□□□□ -0.5
SNRNP48-201ENST00000342415 TMEM25Q86YD3 366 aa11.92□□□□□ -0.5
SNRNP48-201ENST00000342415 VRK3Q8IV63 474 aa11.92□□□□□ -0.5
SNRNP48-201ENST00000342415 CCDC116Q8IYX3 515 aa11.92□□□□□ -0.5
SNRNP48-201ENST00000342415 METTL4Q8N3J2 472 aa11.92□□□□□ -0.5
SNRNP48-201ENST00000342415 KREMEN2Q8NCW0 462 aa11.92□□□□□ -0.5
SNRNP48-201ENST00000342415 C12orf66Q96MD2 445 aa11.92□□□□□ -0.5
SNRNP48-201ENST00000342415 NECTIN4Q96NY8 510 aa11.92□□□□□ -0.5
SNRNP48-201ENST00000342415 PIP5K1AQ99755 562 aa11.92□□□□□ -0.5
SNRNP48-201ENST00000342415 CARS2Q9HA77 564 aaKnown RBP11.92□□□□□ -0.5
SNRNP48-201ENST00000342415 ERI3O43414 337 aaKnown RBP11.91□□□□□ -0.5
SNRNP48-201ENST00000342415 LATO43561 262 aa11.91□□□□□ -0.5
SNRNP48-201ENST00000342415 NUDT14O95848 222 aa11.91□□□□□ -0.5
SNRNP48-201ENST00000342415 INAVAQ3KP66 663 aa11.91□□□□□ -0.5
SNRNP48-201ENST00000342415 GGHQ92820 318 aa11.91□□□□□ -0.5
SNRNP48-201ENST00000342415 OR5M11Q96RB7 305 aa11.91□□□□□ -0.5
SNRNP48-201ENST00000342415 CPPED1Q9BRF8 314 aaPredicted RBP11.91□□□□□ -0.5
SNRNP48-201ENST00000342415 RSPH9Q9H1X1 276 aaPredicted RBP11.91□□□□□ -0.5
SNRNP48-201ENST00000342415 MTIF3Q9H2K0 278 aaKnown RBP11.91□□□□□ -0.5
SNRNP48-201ENST00000342415 INSL5Q9Y5Q6 135 aa11.91□□□□□ -0.5
SNRNP48-201ENST00000342415 SPACA6W5XKT8 324 aa11.91□□□□□ -0.5
SNRNP48-201ENST00000342415 PHIPQ8WWQ0 1821 aa11.91□□□□□ -0.5
SNRNP48-201ENST00000342415 A0A1W2PQL4 384 aaPredicted RBP11.91□□□□□ -0.5
SNRNP48-201ENST00000342415 FAM155AB1AL88 458 aaPredicted RBP11.91□□□□□ -0.5
SNRNP48-201ENST00000342415 SLC31A1O15431 190 aa11.91□□□□□ -0.5
SNRNP48-201ENST00000342415 ORC5O43913 435 aa11.91□□□□□ -0.5
SNRNP48-201ENST00000342415 B4GALT3O60512 393 aa11.91□□□□□ -0.5
SNRNP48-201ENST00000342415 PTX3P26022 381 aaPredicted RBP11.91□□□□□ -0.5
SNRNP48-201ENST00000342415 HOXC13P31276 330 aa11.91□□□□□ -0.5
SNRNP48-201ENST00000342415 RGS6P49758 472 aa11.91□□□□□ -0.5
SNRNP48-201ENST00000342415 CDH11P55287 796 aa11.91□□□□□ -0.5
SNRNP48-201ENST00000342415 MCCD1P59942 119 aaPredicted RBP11.91□□□□□ -0.5
SNRNP48-201ENST00000342415 PPP2R2BQ00005 443 aa11.91□□□□□ -0.5
SNRNP48-201ENST00000342415 ZNF630Q2M218 657 aaPredicted RBP11.91□□□□□ -0.5
SNRNP48-201ENST00000342415 ZDHHC20Q5W0Z9 365 aa11.91□□□□□ -0.5
SNRNP48-201ENST00000342415 GTF2IRD2BQ6EKJ0 949 aa11.91□□□□□ -0.5
SNRNP48-201ENST00000342415 GTF2IRD2Q86UP8 949 aa11.91□□□□□ -0.5
SNRNP48-201ENST00000342415 CADM2Q8N3J6 435 aa11.91□□□□□ -0.5
SNRNP48-201ENST00000342415 TMEM145Q8NBT3 493 aa11.91□□□□□ -0.5
SNRNP48-201ENST00000342415 FAM98AQ8NCA5 519 aaKnown RBP11.91□□□□□ -0.5
SNRNP48-201ENST00000342415 SLC37A3Q8NCC5 494 aa11.91□□□□□ -0.5
SNRNP48-201ENST00000342415 OR51G2Q8NGK0 314 aa11.91□□□□□ -0.5
SNRNP48-201ENST00000342415 GPR151Q8TDV0 419 aa11.91□□□□□ -0.5
SNRNP48-201ENST00000342415 NEIL2Q969S2 332 aa11.91□□□□□ -0.5
SNRNP48-201ENST00000342415 MBOAT4Q96T53 435 aa11.91□□□□□ -0.5
SNRNP48-201ENST00000342415 MACROD1Q9BQ69 325 aa11.91□□□□□ -0.5
SNRNP48-201ENST00000342415 CARD8Q9Y2G2 431 aa11.91□□□□□ -0.5
SNRNP48-201ENST00000342415 FAM170BA6NMN3 283 aa11.91□□□□□ -0.5
SNRNP48-201ENST00000342415 M0R3H8 397 aa11.91□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms