RNA–Protein interactions for RNA: ENST00000340541.4

VAPA-201, Transcript of VAMP associated protein A, humanhuman

TSL 5 BASIC

Gene VAPA, Length 1,227 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPA-201ENST00000340541 KCNC2Q96PR1 638 aa14.45□□□□□ -0.1
VAPA-201ENST00000340541 MTERF1Q99551 399 aaKnown RBP14.45□□□□□ -0.1
VAPA-201ENST00000340541 BARD1Q99728 777 aaKnown RBP14.45□□□□□ -0.1
VAPA-201ENST00000340541 TBCDQ9BTW9 1192 aa14.45□□□□□ -0.1
VAPA-201ENST00000340541 OR51B5Q9H339 312 aa14.45□□□□□ -0.1
VAPA-201ENST00000340541 SEMA4BQ9NPR2 832 aaPredicted RBP14.45□□□□□ -0.1
VAPA-201ENST00000340541 NECTIN3Q9NQS3 549 aa14.45□□□□□ -0.1
VAPA-201ENST00000340541 DAPP1Q9UN19 280 aa14.45□□□□□ -0.1
VAPA-201ENST00000340541 PCDHGA11Q9Y5H2 935 aa14.45□□□□□ -0.1
VAPA-201ENST00000340541 CSAG2Q9Y5P2 127 aa14.45□□□□□ -0.1
VAPA-201ENST00000340541 A0A088AWK7 358 aa14.44□□□□□ -0.1
VAPA-201ENST00000340541 TCRBV16S1A1N1A0A5B0 115 aa14.44□□□□□ -0.1
VAPA-201ENST00000340541 SMIM23A6NLE4 172 aa14.44□□□□□ -0.1
VAPA-201ENST00000340541 TGFBR3LH3BV60 316 aa14.44□□□□□ -0.1
VAPA-201ENST00000340541 PSMD12O00232 456 aaPredicted RBP14.44□□□□□ -0.1
VAPA-201ENST00000340541 SAP18O00422 153 aaKnown RBP14.44□□□□□ -0.1
VAPA-201ENST00000340541 CYR61O00622 381 aa14.44□□□□□ -0.1
VAPA-201ENST00000340541 PRMT3O60678 531 aa14.44□□□□□ -0.1
VAPA-201ENST00000340541 CDH16O75309 829 aa14.44□□□□□ -0.1
VAPA-201ENST00000340541 ETHE1O95571 254 aa14.44□□□□□ -0.1
VAPA-201ENST00000340541 ITGAMP11215 1152 aa14.44□□□□□ -0.1
VAPA-201ENST00000340541 ZNF10P21506 573 aaPredicted RBP14.44□□□□□ -0.1
VAPA-201ENST00000340541 ATP5A1P25705 553 aaKnown RBP14.44□□□□□ -0.1
VAPA-201ENST00000340541 NEK2P51955 445 aa14.44□□□□□ -0.1
VAPA-201ENST00000340541 CCNG1P51959 295 aa14.44□□□□□ -0.1
VAPA-201ENST00000340541 CDH13P55290 713 aa14.44□□□□□ -0.1
VAPA-201ENST00000340541 LIM2P55344 173 aa14.44□□□□□ -0.1
VAPA-201ENST00000340541 RPS13P62277 151 aaKnown RBP14.44□□□□□ -0.1
VAPA-201ENST00000340541 HERVK_113P63132 956 aa14.44□□□□□ -0.1
VAPA-201ENST00000340541 TGM3Q08188 693 aa14.44□□□□□ -0.1
VAPA-201ENST00000340541 MRPL49Q13405 166 aaKnown RBP14.44□□□□□ -0.1
VAPA-201ENST00000340541 DDX39BQ13838 428 aaKnown RBP14.44□□□□□ -0.1
VAPA-201ENST00000340541 GGTA1PQ4G0N0 100 aa14.44□□□□□ -0.1
VAPA-201ENST00000340541 UNC50Q53HI1 259 aa14.44□□□□□ -0.1
VAPA-201ENST00000340541 PRR30Q53SZ7 412 aaPredicted RBP14.44□□□□□ -0.1
VAPA-201ENST00000340541 IRAK1BP1Q5VVH5 260 aa14.44□□□□□ -0.1
VAPA-201ENST00000340541 FAM219BQ5XKK7 198 aa14.44□□□□□ -0.1
VAPA-201ENST00000340541 PLAG1Q6DJT9 500 aa14.44□□□□□ -0.1
VAPA-201ENST00000340541 EMBQ6PCB8 327 aa14.44□□□□□ -0.1
VAPA-201ENST00000340541 CHSY3Q70JA7 882 aa14.44□□□□□ -0.1
VAPA-201ENST00000340541 ACOT4Q8N9L9 421 aa14.44□□□□□ -0.1
VAPA-201ENST00000340541 SRFBP1Q8NEF9 429 aaKnown RBP14.44□□□□□ -0.1
VAPA-201ENST00000340541 CAVIN3Q969G5 261 aa14.44□□□□□ -0.1
VAPA-201ENST00000340541 TMEM237Q96Q45 408 aa14.44□□□□□ -0.1
VAPA-201ENST00000340541 CSF3RQ99062 836 aa14.44□□□□□ -0.1
VAPA-201ENST00000340541 SORBS1Q9BX66 1292 aaKnown RBP14.44□□□□□ -0.1
VAPA-201ENST00000340541 ERVK-6Q9BXR3 956 aa14.44□□□□□ -0.1
VAPA-201ENST00000340541 ZNF717Q9BY31 904 aaPredicted RBP14.44□□□□□ -0.1
VAPA-201ENST00000340541 PRDM9Q9NQV7 894 aa14.44□□□□□ -0.1
VAPA-201ENST00000340541 LUZP4Q9P127 313 aa14.44□□□□□ -0.1
VAPA-201ENST00000340541 MAP10Q9P2G4 905 aa14.44□□□□□ -0.1
VAPA-201ENST00000340541 DCDC2Q9UHG0 476 aa14.44□□□□□ -0.1
VAPA-201ENST00000340541 ZNF225Q9UK10 706 aa14.44□□□□□ -0.1
VAPA-201ENST00000340541 G3V2L1 256 aa14.43□□□□□ -0.1
VAPA-201ENST00000340541 PLPP1O14494 284 aa14.43□□□□□ -0.1
VAPA-201ENST00000340541 ICAM2P13598 275 aa14.43□□□□□ -0.1
VAPA-201ENST00000340541 TSPAN8P19075 237 aa14.43□□□□□ -0.1
VAPA-201ENST00000340541 HIST1H1TP22492 207 aaPredicted RBP14.43□□□□□ -0.1
VAPA-201ENST00000340541 ATP5F1P24539 256 aaPredicted RBP14.43□□□□□ -0.1
VAPA-201ENST00000340541 OR4D2P58180 307 aa14.43□□□□□ -0.1
VAPA-201ENST00000340541 MFAP5Q13361 173 aa14.43□□□□□ -0.1
VAPA-201ENST00000340541 ZNF678Q5SXM1 525 aa14.43□□□□□ -0.1
VAPA-201ENST00000340541 LETMD1Q6P1Q0 360 aa14.43□□□□□ -0.1
VAPA-201ENST00000340541 PAPD4Q6PIY7 484 aaKnown RBP14.43□□□□□ -0.1
VAPA-201ENST00000340541 ISLR2Q6UXK2 745 aa14.43□□□□□ -0.1
VAPA-201ENST00000340541 Q6ZS92 163 aa14.43□□□□□ -0.1
VAPA-201ENST00000340541 CISD2Q8N5K1 135 aaKnown RBP14.43□□□□□ -0.1
VAPA-201ENST00000340541 SIRT6Q8N6T7 355 aa14.43□□□□□ -0.1
VAPA-201ENST00000340541 FAM47BQ8NA70 645 aa14.43□□□□□ -0.1
VAPA-201ENST00000340541 OR4F6Q8NGB9 312 aa14.43□□□□□ -0.1
VAPA-201ENST00000340541 ADAMTS18Q8TE60 1221 aa14.43□□□□□ -0.1
VAPA-201ENST00000340541 ATP6V1E2Q96A05 226 aa14.43□□□□□ -0.1
VAPA-201ENST00000340541 REPS1Q96D71 796 aa14.43□□□□□ -0.1
VAPA-201ENST00000340541 C19orf60Q96EN9 201 aa14.43□□□□□ -0.1
VAPA-201ENST00000340541 LMF1Q96S06 567 aa14.43□□□□□ -0.1
VAPA-201ENST00000340541 MAPKAP1Q9BPZ7 522 aa14.43□□□□□ -0.1
VAPA-201ENST00000340541 PARD6BQ9BYG5 372 aa14.43□□□□□ -0.1
VAPA-201ENST00000340541 ROGDIQ9GZN7 287 aa14.43□□□□□ -0.1
VAPA-201ENST00000340541 ILKAPQ9H0C8 392 aaPredicted RBP14.43□□□□□ -0.1
VAPA-201ENST00000340541 COPS7BQ9H9Q2 264 aaPredicted RBP14.43□□□□□ -0.1
VAPA-201ENST00000340541 LYRM4Q9HD34 91 aa14.43□□□□□ -0.1
VAPA-201ENST00000340541 ASF1BQ9NVP2 202 aa14.43□□□□□ -0.1
VAPA-201ENST00000340541 PSD3Q9NYI0 1048 aa14.43□□□□□ -0.1
VAPA-201ENST00000340541 PTGFRNQ9P2B2 879 aa14.43□□□□□ -0.1
VAPA-201ENST00000340541 PPT2Q9UMR5 302 aa14.43□□□□□ -0.1
VAPA-201ENST00000340541 SLC5A6Q9Y289 635 aa14.43□□□□□ -0.1
VAPA-201ENST00000340541 MMACHCQ9Y4U1 282 aa14.43□□□□□ -0.1
VAPA-201ENST00000340541 COPG1Q9Y678 874 aaKnown RBP14.43□□□□□ -0.1
VAPA-201ENST00000340541 NOTCH2Q04721 2471 aa14.43□□□□□ -0.1
VAPA-201ENST00000340541 HIVEP3Q5T1R4 2406 aa14.42□□□□□ -0.1
VAPA-201ENST00000340541 FOXE1O00358 373 aaPredicted RBP14.42□□□□□ -0.1
VAPA-201ENST00000340541 GLRA3O75311 464 aa14.42□□□□□ -0.1
VAPA-201ENST00000340541 PROCP04070 461 aa14.42□□□□□ -0.1
VAPA-201ENST00000340541 KRT15P19012 456 aa14.42□□□□□ -0.1
VAPA-201ENST00000340541 TAC1P20366 129 aa14.42□□□□□ -0.1
VAPA-201ENST00000340541 IMPDH1P20839 514 aa14.42□□□□□ -0.1
VAPA-201ENST00000340541 PTX3P26022 381 aaPredicted RBP14.42□□□□□ -0.1
VAPA-201ENST00000340541 ARFIP1P53367 373 aa14.42□□□□□ -0.1
VAPA-201ENST00000340541 PRKAA2P54646 552 aa14.42□□□□□ -0.1
VAPA-201ENST00000340541 HSD17B7P56937 341 aa14.42□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 47.4 ms