RNA–Protein interactions for RNA: ENST00000340477.9

SYNE4-202, Transcript of spectrin repeat containing nuclear envelope family member 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SYNE4, Length 1,004 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE4-202ENST00000340477 KRT6CP48668 564 aa18.04■□□□□ 0.48
SYNE4-202ENST00000340477 HSD17B7P56937 341 aa18.04■□□□□ 0.48
SYNE4-202ENST00000340477 SLC18A2Q05940 514 aa18.04■□□□□ 0.48
SYNE4-202ENST00000340477 LCP2Q13094 533 aa18.04■□□□□ 0.48
SYNE4-202ENST00000340477 SLC13A2Q13183 592 aa18.04■□□□□ 0.48
SYNE4-202ENST00000340477 CUL3Q13618 768 aa18.04■□□□□ 0.48
SYNE4-202ENST00000340477 BTBD16Q32M84 506 aa18.04■□□□□ 0.48
SYNE4-202ENST00000340477 CRB2Q5IJ48 1285 aa18.04■□□□□ 0.48
SYNE4-202ENST00000340477 OR4C11Q6IEV9 310 aa18.04■□□□□ 0.48
SYNE4-202ENST00000340477 PAPD4Q6PIY7 484 aaKnown RBP18.04■□□□□ 0.48
SYNE4-202ENST00000340477 GPRIN3Q6ZVF9 776 aa18.04■□□□□ 0.48
SYNE4-202ENST00000340477 RPS27LQ71UM5 84 aaKnown RBP18.04■□□□□ 0.48
SYNE4-202ENST00000340477 SRRM1Q8IYB3 904 aaKnown RBP18.04■□□□□ 0.48
SYNE4-202ENST00000340477 CCNYL1Q8N7R7 359 aa18.04■□□□□ 0.48
SYNE4-202ENST00000340477 WDR20Q8TBZ3 569 aa18.04■□□□□ 0.48
SYNE4-202ENST00000340477 SMC6Q96SB8 1091 aa18.04■□□□□ 0.48
SYNE4-202ENST00000340477 ZNF382Q96SR6 550 aa18.04■□□□□ 0.48
SYNE4-202ENST00000340477 NMRK1Q9NWW6 199 aa18.04■□□□□ 0.48
SYNE4-202ENST00000340477 MKS1Q9NXB0 559 aa18.04■□□□□ 0.48
SYNE4-202ENST00000340477 MS4A12Q9NXJ0 267 aa18.04■□□□□ 0.48
SYNE4-202ENST00000340477 AHSPQ9NZD4 102 aa18.04■□□□□ 0.48
SYNE4-202ENST00000340477 TEKT2Q9UIF3 430 aa18.04■□□□□ 0.48
SYNE4-202ENST00000340477 PHF11Q9UIL8 331 aa18.04■□□□□ 0.48
SYNE4-202ENST00000340477 EMCNQ9ULC0 261 aa18.04■□□□□ 0.48
SYNE4-202ENST00000340477 IGHV3-20A0A0C4DH32 117 aa18.03■□□□□ 0.48
SYNE4-202ENST00000340477 FAM227AF5H4B4 570 aa18.03■□□□□ 0.48
SYNE4-202ENST00000340477 RTCAO00442 366 aaKnown RBP18.03■□□□□ 0.48
SYNE4-202ENST00000340477 SUV39H1O43463 412 aa18.03■□□□□ 0.48
SYNE4-202ENST00000340477 SEMA3DO95025 777 aa18.03■□□□□ 0.48
SYNE4-202ENST00000340477 SCELO95171 688 aa18.03■□□□□ 0.48
SYNE4-202ENST00000340477 MAOAP21397 527 aa18.03■□□□□ 0.48
SYNE4-202ENST00000340477 CPN2P22792 545 aa18.03■□□□□ 0.48
SYNE4-202ENST00000340477 HMOX2P30519 316 aa18.03■□□□□ 0.48
SYNE4-202ENST00000340477 TLX1P31314 330 aaPredicted RBP18.03■□□□□ 0.48
SYNE4-202ENST00000340477 CASRP41180 1078 aa18.03■□□□□ 0.48
SYNE4-202ENST00000340477 NEK2P51955 445 aa18.03■□□□□ 0.48
SYNE4-202ENST00000340477 EFNA3P52797 238 aa18.03■□□□□ 0.48
SYNE4-202ENST00000340477 PKNOX1P55347 436 aa18.03■□□□□ 0.48
SYNE4-202ENST00000340477 ASPHQ12797 758 aa18.03■□□□□ 0.48
SYNE4-202ENST00000340477 UNC50Q53HI1 259 aa18.03■□□□□ 0.48
SYNE4-202ENST00000340477 PLAG1Q6DJT9 500 aa18.03■□□□□ 0.48
SYNE4-202ENST00000340477 CYP20A1Q6UW02 462 aa18.03■□□□□ 0.48
SYNE4-202ENST00000340477 ISLR2Q6UXK2 745 aa18.03■□□□□ 0.48
SYNE4-202ENST00000340477 SH2D5Q6ZV89 423 aa18.03■□□□□ 0.48
SYNE4-202ENST00000340477 CROCCP2Q86T23 111 aa18.03■□□□□ 0.48
SYNE4-202ENST00000340477 TRABD2AQ86V40 505 aa18.03■□□□□ 0.48
SYNE4-202ENST00000340477 NUDT13Q86X67 352 aa18.03■□□□□ 0.48
SYNE4-202ENST00000340477 RNF175Q8N4F7 328 aa18.03■□□□□ 0.48
SYNE4-202ENST00000340477 EFCAB3Q8N7B9 438 aa18.03■□□□□ 0.48
SYNE4-202ENST00000340477 C7orf57Q8NEG2 295 aa18.03■□□□□ 0.48
SYNE4-202ENST00000340477 SELENOMQ8WWX9 145 aa18.03■□□□□ 0.48
SYNE4-202ENST00000340477 SREK1Q8WXA9 508 aaKnown RBP18.03■□□□□ 0.48
SYNE4-202ENST00000340477 MTFMTQ96DP5 389 aaKnown RBP18.03■□□□□ 0.48
SYNE4-202ENST00000340477 TMEM109Q9BVC6 243 aa18.03■□□□□ 0.48
SYNE4-202ENST00000340477 SLC29A3Q9BZD2 475 aa18.03■□□□□ 0.48
SYNE4-202ENST00000340477 LYARQ9NX58 379 aaKnown RBP18.03■□□□□ 0.48
SYNE4-202ENST00000340477 SENP1Q9P0U3 644 aa18.03■□□□□ 0.48
SYNE4-202ENST00000340477 ARHGAP10A1A4S6 786 aa18.02■□□□□ 0.48
SYNE4-202ENST00000340477 H3BQF6 201 aa18.02■□□□□ 0.48
SYNE4-202ENST00000340477 PLPP1O14494 284 aa18.02■□□□□ 0.48
SYNE4-202ENST00000340477 CRCPO75575 148 aa18.02■□□□□ 0.48
SYNE4-202ENST00000340477 ENO1P06733 434 aaKnown RBP18.02■□□□□ 0.48
SYNE4-202ENST00000340477 CPA3P15088 417 aa18.02■□□□□ 0.48
SYNE4-202ENST00000340477 BUD31P41223 144 aaPredicted RBP18.02■□□□□ 0.48
SYNE4-202ENST00000340477 TAS2R50P59544 299 aa18.02■□□□□ 0.48
SYNE4-202ENST00000340477 BTG2P78543 158 aa18.02■□□□□ 0.48
SYNE4-202ENST00000340477 Q0VFX4 171 aa18.02■□□□□ 0.48
SYNE4-202ENST00000340477 SGO1Q5FBB7 561 aa18.02■□□□□ 0.48
SYNE4-202ENST00000340477 LETMD1Q6P1Q0 360 aa18.02■□□□□ 0.48
SYNE4-202ENST00000340477 IGFL3Q6UXB1 125 aa18.02■□□□□ 0.48
SYNE4-202ENST00000340477 ZNF793Q6ZN11 406 aa18.02■□□□□ 0.48
SYNE4-202ENST00000340477 PAGE2Q7Z2X7 111 aa18.02■□□□□ 0.48
SYNE4-202ENST00000340477 UBE3DQ7Z6J8 389 aa18.02■□□□□ 0.48
SYNE4-202ENST00000340477 SHISA5Q8N114 240 aa18.02■□□□□ 0.48
SYNE4-202ENST00000340477 ZCCHC7Q8N3Z6 543 aaKnown RBP18.02■□□□□ 0.48
SYNE4-202ENST00000340477 CDYL2Q8N8U2 506 aa18.02■□□□□ 0.48
SYNE4-202ENST00000340477 BRIX1Q8TDN6 353 aaKnown RBP18.02■□□□□ 0.48
SYNE4-202ENST00000340477 IMMP1LQ96LU5 166 aa18.02■□□□□ 0.48
SYNE4-202ENST00000340477 PTGFRNQ9P2B2 879 aa18.02■□□□□ 0.48
SYNE4-202ENST00000340477 FBXW2Q9UKT8 454 aa18.02■□□□□ 0.48
SYNE4-202ENST00000340477 ZNF462Q96JM2 2506 aa18.02■□□□□ 0.47
SYNE4-202ENST00000340477 TCRBV16S1A1N1A0A5B0 115 aa18.01■□□□□ 0.47
SYNE4-202ENST00000340477 G3V2L1 256 aa18.01■□□□□ 0.47
SYNE4-202ENST00000340477 RGS16O15492 202 aaPredicted RBP18.01■□□□□ 0.47
SYNE4-202ENST00000340477 OR4F21O95013 312 aa18.01■□□□□ 0.47
SYNE4-202ENST00000340477 STX4Q12846 297 aa18.01■□□□□ 0.47
SYNE4-202ENST00000340477 SLAMF1Q13291 335 aa18.01■□□□□ 0.47
SYNE4-202ENST00000340477 M1APQ8TC57 530 aa18.01■□□□□ 0.47
SYNE4-202ENST00000340477 METTL6Q8TCB7 284 aa18.01■□□□□ 0.47
SYNE4-202ENST00000340477 MAPKAP1Q9BPZ7 522 aa18.01■□□□□ 0.47
SYNE4-202ENST00000340477 ILKAPQ9H0C8 392 aaPredicted RBP18.01■□□□□ 0.47
SYNE4-202ENST00000340477 WDR41Q9HAD4 459 aa18.01■□□□□ 0.47
SYNE4-202ENST00000340477 BRF2Q9HAW0 419 aa18.01■□□□□ 0.47
SYNE4-202ENST00000340477 KCNK13Q9HB14 408 aa18.01■□□□□ 0.47
SYNE4-202ENST00000340477 SLAMF7Q9NQ25 335 aa18.01■□□□□ 0.47
SYNE4-202ENST00000340477 ABI3Q9P2A4 366 aa18.01■□□□□ 0.47
SYNE4-202ENST00000340477 IGKV3D-11A0A0A0MRZ8 115 aa18■□□□□ 0.47
SYNE4-202ENST00000340477 DYTNA2CJ06 578 aa18■□□□□ 0.47
SYNE4-202ENST00000340477 SAGE2PA6NJ88 616 aa18■□□□□ 0.47
SYNE4-202ENST00000340477 ITGAMP11215 1152 aa18■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms