RNA–Protein interactions for RNA: ENST00000340342.10

CTSL-201, Transcript of cathepsin L, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTSL, Length 1,436 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSL-201ENST00000340342 NUDCD3Q8IVD9 361 aa13.39□□□□□ -0.27
CTSL-201ENST00000340342 ACOT4Q8N9L9 421 aa13.39□□□□□ -0.27
CTSL-201ENST00000340342 TMEM102Q8N9M5 508 aaPredicted RBP13.39□□□□□ -0.27
CTSL-201ENST00000340342 FAM47BQ8NA70 645 aa13.39□□□□□ -0.27
CTSL-201ENST00000340342 SRFBP1Q8NEF9 429 aaKnown RBP13.39□□□□□ -0.27
CTSL-201ENST00000340342 MGARPQ8TDB4 240 aa13.39□□□□□ -0.27
CTSL-201ENST00000340342 TBC1D20Q96BZ9 403 aa13.39□□□□□ -0.27
CTSL-201ENST00000340342 ABHD17AQ96GS6 310 aa13.39□□□□□ -0.27
CTSL-201ENST00000340342 CNDP1Q96KN2 507 aa13.39□□□□□ -0.27
CTSL-201ENST00000340342 SERINC2Q96SA4 455 aa13.39□□□□□ -0.27
CTSL-201ENST00000340342 CSF3RQ99062 836 aa13.39□□□□□ -0.27
CTSL-201ENST00000340342 TBCDQ9BTW9 1192 aa13.39□□□□□ -0.27
CTSL-201ENST00000340342 MRPL1Q9BYD6 325 aaKnown RBP13.39□□□□□ -0.27
CTSL-201ENST00000340342 ING2Q9H160 280 aa13.39□□□□□ -0.27
CTSL-201ENST00000340342 SEMA3GQ9NS98 782 aa13.39□□□□□ -0.27
CTSL-201ENST00000340342 SLC12A4Q9UP95 1085 aa13.39□□□□□ -0.27
CTSL-201ENST00000340342 TNRC6AQ8NDV7 1962 aaKnown RBP13.39□□□□□ -0.27
CTSL-201ENST00000340342 B8ZZF3 427 aa13.39□□□□□ -0.27
CTSL-201ENST00000340342 NPHS1O60500 1241 aa13.39□□□□□ -0.27
CTSL-201ENST00000340342 ALOX12BO75342 701 aa13.39□□□□□ -0.27
CTSL-201ENST00000340342 ULK1O75385 1050 aa13.39□□□□□ -0.27
CTSL-201ENST00000340342 CRCPO75575 148 aa13.39□□□□□ -0.27
CTSL-201ENST00000340342 DNAJB5O75953 348 aa13.39□□□□□ -0.27
CTSL-201ENST00000340342 KRT6AP02538 564 aa13.39□□□□□ -0.27
CTSL-201ENST00000340342 GBAP04062 536 aa13.39□□□□□ -0.27
CTSL-201ENST00000340342 KRT6BP04259 564 aa13.39□□□□□ -0.27
CTSL-201ENST00000340342 BSGP35613 385 aa13.39□□□□□ -0.27
CTSL-201ENST00000340342 KRT6CP48668 564 aa13.39□□□□□ -0.27
CTSL-201ENST00000340342 HNRNPFP52597 415 aaKnown RBP13.39□□□□□ -0.27
CTSL-201ENST00000340342 RRADP55042 308 aa13.39□□□□□ -0.27
CTSL-201ENST00000340342 LIM2P55344 173 aa13.39□□□□□ -0.27
CTSL-201ENST00000340342 WDR4P57081 412 aaKnown RBP13.39□□□□□ -0.27
CTSL-201ENST00000340342 BTG2P78543 158 aa13.39□□□□□ -0.27
CTSL-201ENST00000340342 RCN2Q14257 317 aa13.39□□□□□ -0.27
CTSL-201ENST00000340342 CHI3L2Q15782 390 aa13.39□□□□□ -0.27
CTSL-201ENST00000340342 ARL13AQ5H913 290 aaPredicted RBP13.39□□□□□ -0.27
CTSL-201ENST00000340342 C10orf62Q5T681 223 aaPredicted RBP13.39□□□□□ -0.27
CTSL-201ENST00000340342 KIRREL2Q6UWL6 708 aa13.39□□□□□ -0.27
CTSL-201ENST00000340342 LANCL3Q6ZV70 420 aa13.39□□□□□ -0.27
CTSL-201ENST00000340342 CUZD1Q86UP6 607 aa13.39□□□□□ -0.27
CTSL-201ENST00000340342 TMEM52Q8NDY8 209 aa13.39□□□□□ -0.27
CTSL-201ENST00000340342 OR6Y1Q8NGX8 325 aa13.39□□□□□ -0.27
CTSL-201ENST00000340342 TSLPQ969D9 159 aa13.39□□□□□ -0.27
CTSL-201ENST00000340342 OR1F2PQ96R84 312 aa13.39□□□□□ -0.27
CTSL-201ENST00000340342 SERPINI1Q99574 410 aa13.39□□□□□ -0.27
CTSL-201ENST00000340342 PAIP2Q9BPZ3 127 aaKnown RBP13.39□□□□□ -0.27
CTSL-201ENST00000340342 MAPKAP1Q9BPZ7 522 aa13.39□□□□□ -0.27
CTSL-201ENST00000340342 CENPKQ9BS16 269 aa13.39□□□□□ -0.27
CTSL-201ENST00000340342 P4HTMQ9NXG6 502 aa13.39□□□□□ -0.27
CTSL-201ENST00000340342 PSD3Q9NYI0 1048 aa13.39□□□□□ -0.27
CTSL-201ENST00000340342 PPT2Q9UMR5 302 aa13.39□□□□□ -0.27
CTSL-201ENST00000340342 FIS1Q9Y3D6 152 aa13.39□□□□□ -0.27
CTSL-201ENST00000340342 PRRC2CQ9Y520 2896 aaKnown RBP13.38□□□□□ -0.27
CTSL-201ENST00000340342 CROCCQ5TZA2 2017 aa13.38□□□□□ -0.27
CTSL-201ENST00000340342 TMEM233B4DJY2 109 aa13.38□□□□□ -0.27
CTSL-201ENST00000340342 PSMD12O00232 456 aaPredicted RBP13.38□□□□□ -0.27
CTSL-201ENST00000340342 PEX12O00623 359 aa13.38□□□□□ -0.27
CTSL-201ENST00000340342 BIRC5O15392 142 aa13.38□□□□□ -0.27
CTSL-201ENST00000340342 SCELO95171 688 aa13.38□□□□□ -0.27
CTSL-201ENST00000340342 RAB38P57729 211 aa13.38□□□□□ -0.27
CTSL-201ENST00000340342 RHAGQ02094 409 aa13.38□□□□□ -0.27
CTSL-201ENST00000340342 EEF1A2Q05639 463 aaKnown RBP13.38□□□□□ -0.27
CTSL-201ENST00000340342 TCTN3Q6NUS6 607 aa13.38□□□□□ -0.27
CTSL-201ENST00000340342 AMER2Q8N7J2 671 aa13.38□□□□□ -0.27
CTSL-201ENST00000340342 PPP1R14CQ8TAE6 165 aa13.38□□□□□ -0.27
CTSL-201ENST00000340342 C9orf43Q8TAL5 461 aaPredicted RBP13.38□□□□□ -0.27
CTSL-201ENST00000340342 AGR3Q8TD06 166 aa13.38□□□□□ -0.27
CTSL-201ENST00000340342 SREK1Q8WXA9 508 aaKnown RBP13.38□□□□□ -0.27
CTSL-201ENST00000340342 FER1L6-AS2Q96M78 137 aa13.38□□□□□ -0.27
CTSL-201ENST00000340342 TRMOQ9BU70 441 aa13.38□□□□□ -0.27
CTSL-201ENST00000340342 NPLQ9BXD5 320 aaPredicted RBP13.38□□□□□ -0.27
CTSL-201ENST00000340342 TRIM55Q9BYV6 548 aa13.38□□□□□ -0.27
CTSL-201ENST00000340342 ACPTQ9BZG2 426 aa13.38□□□□□ -0.27
CTSL-201ENST00000340342 ROGDIQ9GZN7 287 aa13.38□□□□□ -0.27
CTSL-201ENST00000340342 ZNF395Q9H8N7 513 aaPredicted RBP13.38□□□□□ -0.27
CTSL-201ENST00000340342 BRF2Q9HAW0 419 aa13.38□□□□□ -0.27
CTSL-201ENST00000340342 CLK4Q9HAZ1 481 aaKnown RBP13.38□□□□□ -0.27
CTSL-201ENST00000340342 KCMF1Q9P0J7 381 aa13.38□□□□□ -0.27
CTSL-201ENST00000340342 FBXL4Q9UKA2 621 aa13.38□□□□□ -0.27
CTSL-201ENST00000340342 DAPP1Q9UN19 280 aa13.38□□□□□ -0.27
CTSL-201ENST00000340342 PTGDR2Q9Y5Y4 395 aa13.38□□□□□ -0.27
CTSL-201ENST00000340342 A0A0A6YYD5 115 aa13.37□□□□□ -0.27
CTSL-201ENST00000340342 ITM2AO43736 263 aa13.37□□□□□ -0.27
CTSL-201ENST00000340342 TMPRSS11DO60235 418 aa13.37□□□□□ -0.27
CTSL-201ENST00000340342 LYPLA1O75608 230 aaPredicted RBP13.37□□□□□ -0.27
CTSL-201ENST00000340342 SEMA3DO95025 777 aa13.37□□□□□ -0.27
CTSL-201ENST00000340342 KLK1P06870 262 aa13.37□□□□□ -0.27
CTSL-201ENST00000340342 C8orf89P0DMQ9 161 aa13.37□□□□□ -0.27
CTSL-201ENST00000340342 ACPPP15309 386 aa13.37□□□□□ -0.27
CTSL-201ENST00000340342 NR1D1P20393 614 aa13.37□□□□□ -0.27
CTSL-201ENST00000340342 MAOAP21397 527 aa13.37□□□□□ -0.27
CTSL-201ENST00000340342 BGNP21810 368 aa13.37□□□□□ -0.27
CTSL-201ENST00000340342 PPP2R2AP63151 447 aa13.37□□□□□ -0.27
CTSL-201ENST00000340342 HMGCS1Q01581 520 aa13.37□□□□□ -0.27
CTSL-201ENST00000340342 GALNT1Q10472 559 aaPredicted RBP13.37□□□□□ -0.27
CTSL-201ENST00000340342 TBL3Q12788 808 aaKnown RBP13.37□□□□□ -0.27
CTSL-201ENST00000340342 NFATC3Q12968 1075 aa13.37□□□□□ -0.27
CTSL-201ENST00000340342 CSTF3Q12996 717 aaKnown RBP13.37□□□□□ -0.27
CTSL-201ENST00000340342 SLAMF1Q13291 335 aa13.37□□□□□ -0.27
CTSL-201ENST00000340342 HHATQ5VTY9 493 aa13.37□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms