RNA–Protein interactions for RNA: ENST00000339865.9

USP47-202, Transcript of ubiquitin specific peptidase 47, humanhuman

TSL 2 BASIC

Gene USP47, Length 7,775 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP47-202ENST00000339865 EPHX1P07099 455 aa12.41□□□□□ -0.42
USP47-202ENST00000339865 SNRNP70P08621 437 aaKnown RBP12.41□□□□□ -0.42
USP47-202ENST00000339865 PNLIPRP1P54315 467 aa12.41□□□□□ -0.42
USP47-202ENST00000339865 GSTM4Q03013 218 aa12.41□□□□□ -0.42
USP47-202ENST00000339865 LRRC73Q5JTD7 316 aa12.41□□□□□ -0.42
USP47-202ENST00000339865 UNC93AQ86WB7 457 aa12.41□□□□□ -0.42
USP47-202ENST00000339865 LPPQ93052 612 aa12.41□□□□□ -0.42
USP47-202ENST00000339865 RGMAQ96B86 450 aa12.41□□□□□ -0.42
USP47-202ENST00000339865 RBCK1Q9BYM8 510 aa12.41□□□□□ -0.42
USP47-202ENST00000339865 BAZ2AQ9UIF9 1905 aaKnown RBP12.4□□□□□ -0.42
USP47-202ENST00000339865 CKAP5Q14008 2032 aa12.4□□□□□ -0.42
USP47-202ENST00000339865 FAM170BA6NMN3 283 aa12.4□□□□□ -0.42
USP47-202ENST00000339865 CAPN5O15484 640 aaPredicted RBP12.4□□□□□ -0.42
USP47-202ENST00000339865 NPHS1O60500 1241 aa12.4□□□□□ -0.42
USP47-202ENST00000339865 RPL10P27635 214 aaKnown RBP12.4□□□□□ -0.42
USP47-202ENST00000339865 GABRR2P28476 465 aa12.4□□□□□ -0.42
USP47-202ENST00000339865 ACVR1BP36896 505 aa12.4□□□□□ -0.42
USP47-202ENST00000339865 LRFN4Q6PJG9 635 aa12.4□□□□□ -0.42
USP47-202ENST00000339865 MRPL38Q96DV4 380 aaKnown RBP12.4□□□□□ -0.42
USP47-202ENST00000339865 EBF4Q9BQW3 602 aa12.4□□□□□ -0.42
USP47-202ENST00000339865 TSSK6Q9BXA6 273 aa12.4□□□□□ -0.42
USP47-202ENST00000339865 RPF2Q9H7B2 306 aaKnown RBP12.4□□□□□ -0.42
USP47-202ENST00000339865 NKX1-2Q9UD57 310 aaPredicted RBP12.4□□□□□ -0.42
USP47-202ENST00000339865 LOC102724200A0A096LPH7 203 aaPredicted RBP12.4□□□□□ -0.42
USP47-202ENST00000339865 TRBV2A0A0J9YWF9 115 aa12.4□□□□□ -0.42
USP47-202ENST00000339865 A6NLC8 198 aa12.4□□□□□ -0.42
USP47-202ENST00000339865 ZNF8P17098 575 aaPredicted RBP12.4□□□□□ -0.42
USP47-202ENST00000339865 SNTA1Q13424 505 aa12.4□□□□□ -0.42
USP47-202ENST00000339865 RSU1Q15404 277 aa12.4□□□□□ -0.42
USP47-202ENST00000339865 MSLNLQ96KJ4 702 aa12.4□□□□□ -0.42
USP47-202ENST00000339865 CBY1Q9Y3M2 126 aa12.4□□□□□ -0.42
USP47-202ENST00000339865 A0A1W2PQH9 124 aa12.4□□□□□ -0.42
USP47-202ENST00000339865 AQP12BA6NM10 295 aa12.4□□□□□ -0.42
USP47-202ENST00000339865 TREHO43280 583 aa12.4□□□□□ -0.42
USP47-202ENST00000339865 IRF2P14316 349 aa12.4□□□□□ -0.42
USP47-202ENST00000339865 FXYD4P59646 89 aa12.4□□□□□ -0.42
USP47-202ENST00000339865 CELF3Q5SZQ8 465 aaKnown RBP12.4□□□□□ -0.42
USP47-202ENST00000339865 KDELC1Q6UW63 502 aa12.4□□□□□ -0.42
USP47-202ENST00000339865 SAMD14Q8IZD0 417 aaPredicted RBP12.4□□□□□ -0.42
USP47-202ENST00000339865 SLC43A2Q8N370 569 aa12.4□□□□□ -0.42
USP47-202ENST00000339865 FUCA2Q9BTY2 467 aa12.4□□□□□ -0.42
USP47-202ENST00000339865 TMEM9Q9P0T7 183 aa12.4□□□□□ -0.42
USP47-202ENST00000339865 COL20A1Q9P218 1284 aa12.4□□□□□ -0.42
USP47-202ENST00000339865 PIGBOS1A0A0B4J2F0 54 aa12.4□□□□□ -0.42
USP47-202ENST00000339865 GRXCR1A8MXD5 290 aa12.4□□□□□ -0.42
USP47-202ENST00000339865 JUPP14923 745 aa12.4□□□□□ -0.42
USP47-202ENST00000339865 TPSB2P20231 275 aa12.4□□□□□ -0.42
USP47-202ENST00000339865 LTKP29376 864 aa12.4□□□□□ -0.42
USP47-202ENST00000339865 NRIP1P48552 1158 aa12.4□□□□□ -0.42
USP47-202ENST00000339865 NDUFA6P56556 154 aa12.4□□□□□ -0.42
USP47-202ENST00000339865 POU4F3Q15319 338 aa12.4□□□□□ -0.42
USP47-202ENST00000339865 TPSAB1Q15661 275 aa12.4□□□□□ -0.42
USP47-202ENST00000339865 TMEM225Q6GV28 225 aa12.4□□□□□ -0.42
USP47-202ENST00000339865 CARM1Q86X55 608 aa12.4□□□□□ -0.42
USP47-202ENST00000339865 FBXW5Q969U6 566 aa12.4□□□□□ -0.42
USP47-202ENST00000339865 GPRC5BQ9NZH0 403 aa12.4□□□□□ -0.42
USP47-202ENST00000339865 STUB1Q9UNE7 303 aa12.4□□□□□ -0.42
USP47-202ENST00000339865 VIRMAQ69YN4 1812 aaKnown RBP12.4□□□□□ -0.42
USP47-202ENST00000339865 CORO1AP31146 461 aaKnown RBP12.4□□□□□ -0.42
USP47-202ENST00000339865 TMEM205Q6UW68 189 aa12.4□□□□□ -0.42
USP47-202ENST00000339865 SPPL2BQ8TCT7 592 aa12.4□□□□□ -0.42
USP47-202ENST00000339865 VPS29Q9UBQ0 182 aa12.4□□□□□ -0.42
USP47-202ENST00000339865 IL20RAQ9UHF4 553 aa12.4□□□□□ -0.42
USP47-202ENST00000339865 TP53BP1Q12888 1972 aaPredicted RBP12.4□□□□□ -0.42
USP47-202ENST00000339865 TRBC2A0A5B9 178 aa12.4□□□□□ -0.43
USP47-202ENST00000339865 E7ESA3 106 aa12.4□□□□□ -0.43
USP47-202ENST00000339865 HOXD8P13378 290 aaPredicted RBP12.4□□□□□ -0.43
USP47-202ENST00000339865 PRPS1L1P21108 318 aa12.4□□□□□ -0.43
USP47-202ENST00000339865 ADORA2AP29274 412 aa12.4□□□□□ -0.43
USP47-202ENST00000339865 OR52W1Q6IF63 320 aa12.4□□□□□ -0.43
USP47-202ENST00000339865 WDR53Q7Z5U6 358 aaPredicted RBP12.4□□□□□ -0.43
USP47-202ENST00000339865 CNOT9Q92600 299 aaKnown RBP12.4□□□□□ -0.43
USP47-202ENST00000339865 UBXN10Q96LJ8 280 aa12.4□□□□□ -0.43
USP47-202ENST00000339865 SLA2Q9H6Q3 261 aa12.4□□□□□ -0.43
USP47-202ENST00000339865 RHCGQ9UBD6 479 aa12.4□□□□□ -0.43
USP47-202ENST00000339865 UTS2RQ9UKP6 389 aa12.4□□□□□ -0.43
USP47-202ENST00000339865 MTMR11A4FU01 709 aa12.39□□□□□ -0.43
USP47-202ENST00000339865 PCDH17O14917 1159 aa12.39□□□□□ -0.43
USP47-202ENST00000339865 PRKACGP22612 351 aa12.39□□□□□ -0.43
USP47-202ENST00000339865 PLP2Q04941 152 aa12.39□□□□□ -0.43
USP47-202ENST00000339865 GALEQ14376 348 aa12.39□□□□□ -0.43
USP47-202ENST00000339865 PRAMEF19Q5SWL8 479 aa12.39□□□□□ -0.43
USP47-202ENST00000339865 ATPAF1Q5TC12 328 aaPredicted RBP12.39□□□□□ -0.43
USP47-202ENST00000339865 TMEM198Q66K66 360 aa12.39□□□□□ -0.43
USP47-202ENST00000339865 KCNIP4Q6PIL6 250 aa12.39□□□□□ -0.43
USP47-202ENST00000339865 GPC2Q8N158 579 aa12.39□□□□□ -0.43
USP47-202ENST00000339865 AGBL3Q8NEM8 1001 aa12.39□□□□□ -0.43
USP47-202ENST00000339865 FBXO22Q8NEZ5 403 aa12.39□□□□□ -0.43
USP47-202ENST00000339865 LNX1Q8TBB1 728 aaPredicted RBP12.39□□□□□ -0.43
USP47-202ENST00000339865 PYCR2Q96C36 320 aa12.39□□□□□ -0.43
USP47-202ENST00000339865 GLIS2Q9BZE0 524 aaPredicted RBP12.39□□□□□ -0.43
USP47-202ENST00000339865 FAM117AQ9C073 453 aa12.39□□□□□ -0.43
USP47-202ENST00000339865 QPCTLQ9NXS2 382 aa12.39□□□□□ -0.43
USP47-202ENST00000339865 MYO7AQ13402 2215 aa12.39□□□□□ -0.43
USP47-202ENST00000339865 PI15O43692 258 aa12.39□□□□□ -0.43
USP47-202ENST00000339865 AGR2O95994 175 aa12.39□□□□□ -0.43
USP47-202ENST00000339865 STATHP02808 62 aa12.39□□□□□ -0.43
USP47-202ENST00000339865 CHRM1P11229 460 aaPredicted RBP12.39□□□□□ -0.43
USP47-202ENST00000339865 CBR1P16152 277 aa12.39□□□□□ -0.43
USP47-202ENST00000339865 PORP16435 677 aaPredicted RBP12.39□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms