RNA–Protein interactions for RNA: ENST00000339430.9

LITAF-201, Transcript of lipopolysaccharide induced TNF factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LITAF, Length 2,356 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LITAF-201ENST00000339430 MAPRE3Q9UPY8 281 aa15.58■□□□□ 0.09
LITAF-201ENST00000339430 RNF6Q9Y252 685 aa15.58■□□□□ 0.09
LITAF-201ENST00000339430 COL4A2P08572 1712 aa15.58■□□□□ 0.09
LITAF-201ENST00000339430 PRAMEF25A6NGN4 478 aa15.58■□□□□ 0.08
LITAF-201ENST00000339430 PSMD11O00231 422 aa15.58■□□□□ 0.08
LITAF-201ENST00000339430 TNFRSF21O75509 655 aa15.58■□□□□ 0.08
LITAF-201ENST00000339430 IL3P08700 152 aa15.58■□□□□ 0.08
LITAF-201ENST00000339430 IDUAP35475 653 aa15.58■□□□□ 0.08
LITAF-201ENST00000339430 NCS1P62166 190 aa15.58■□□□□ 0.08
LITAF-201ENST00000339430 SLC5A12Q1EHB4 618 aa15.58■□□□□ 0.08
LITAF-201ENST00000339430 TMEM236Q5W0B7 351 aa15.58■□□□□ 0.08
LITAF-201ENST00000339430 DSG4Q86SJ6 1040 aa15.58■□□□□ 0.08
LITAF-201ENST00000339430 PHF6Q8IWS0 365 aaKnown RBP eCLIP15.58■□□□□ 0.08
LITAF-201ENST00000339430 LRRC56Q8IYG6 542 aaPredicted RBP15.58■□□□□ 0.08
LITAF-201ENST00000339430 SLC5A8Q8N695 610 aa15.58■□□□□ 0.08
LITAF-201ENST00000339430 YIPF6Q96EC8 236 aa15.58■□□□□ 0.08
LITAF-201ENST00000339430 ALOXE3Q9BYJ1 711 aa15.58■□□□□ 0.08
LITAF-201ENST00000339430 ZCCHC2Q9C0B9 1178 aaKnown RBP15.58■□□□□ 0.08
LITAF-201ENST00000339430 C8orf33Q9H7E9 229 aaPredicted RBP15.58■□□□□ 0.08
LITAF-201ENST00000339430 ATAD3AQ9NVI7 634 aa15.58■□□□□ 0.08
LITAF-201ENST00000339430 DNAAF2Q9NVR5 837 aaKnown RBP15.58■□□□□ 0.08
LITAF-201ENST00000339430 M0R3G1 203 aa15.57■□□□□ 0.08
LITAF-201ENST00000339430 FOXE1O00358 373 aaPredicted RBP15.57■□□□□ 0.08
LITAF-201ENST00000339430 IL9P15248 144 aa15.57■□□□□ 0.08
LITAF-201ENST00000339430 FUT4P22083 530 aa15.57■□□□□ 0.08
LITAF-201ENST00000339430 PROX2Q3B8N5 592 aa15.57■□□□□ 0.08
LITAF-201ENST00000339430 TMEM196Q5HYL7 178 aa15.57■□□□□ 0.08
LITAF-201ENST00000339430 DCDC5Q6ZRR9 648 aa15.57■□□□□ 0.08
LITAF-201ENST00000339430 P2RY8Q86VZ1 359 aa15.57■□□□□ 0.08
LITAF-201ENST00000339430 CENPSQ8N2Z9 138 aa15.57■□□□□ 0.08
LITAF-201ENST00000339430 OR5AR1Q8NGP9 310 aa15.57■□□□□ 0.08
LITAF-201ENST00000339430 RPL3LQ92901 407 aaKnown RBP15.57■□□□□ 0.08
LITAF-201ENST00000339430 SH3YL1Q96HL8 342 aaPredicted RBP15.57■□□□□ 0.08
LITAF-201ENST00000339430 PITX2Q99697 317 aa15.57■□□□□ 0.08
LITAF-201ENST00000339430 EPHX3Q9H6B9 360 aa15.57■□□□□ 0.08
LITAF-201ENST00000339430 SELENONQ9NZV5 590 aa15.57■□□□□ 0.08
LITAF-201ENST00000339430 ASF1AQ9Y294 204 aa15.57■□□□□ 0.08
LITAF-201ENST00000339430 CFAP20Q9Y6A4 193 aaKnown RBP15.57■□□□□ 0.08
LITAF-201ENST00000339430 GPR37L1O60883 481 aa15.57■□□□□ 0.08
LITAF-201ENST00000339430 OCM2P0CE71 109 aa15.57■□□□□ 0.08
LITAF-201ENST00000339430 OCMP0CE72 109 aaPredicted RBP15.57■□□□□ 0.08
LITAF-201ENST00000339430 ACVR2AP27037 513 aa15.57■□□□□ 0.08
LITAF-201ENST00000339430 OCA2Q04671 838 aa15.57■□□□□ 0.08
LITAF-201ENST00000339430 EXOC3L2Q2M3D2 409 aa15.57■□□□□ 0.08
LITAF-201ENST00000339430 IFI44LQ53G44 452 aa15.57■□□□□ 0.08
LITAF-201ENST00000339430 SYT6Q5T7P8 510 aaPredicted RBP15.57■□□□□ 0.08
LITAF-201ENST00000339430 FAM71E1Q6IPT2 247 aa15.57■□□□□ 0.08
LITAF-201ENST00000339430 PLA2G15Q8NCC3 412 aa15.57■□□□□ 0.08
LITAF-201ENST00000339430 FBXO15Q8NCQ5 510 aaPredicted RBP15.57■□□□□ 0.08
LITAF-201ENST00000339430 OR10G2Q8NGC3 310 aa15.57■□□□□ 0.08
LITAF-201ENST00000339430 OR52N2Q8NGI0 321 aa15.57■□□□□ 0.08
LITAF-201ENST00000339430 CXorf40BQ96DE9 158 aa15.57■□□□□ 0.08
LITAF-201ENST00000339430 WDR34Q96EX3 536 aa15.57■□□□□ 0.08
LITAF-201ENST00000339430 PPP1R16AQ96I34 528 aa15.57■□□□□ 0.08
LITAF-201ENST00000339430 COX4I2Q96KJ9 171 aa15.57■□□□□ 0.08
LITAF-201ENST00000339430 NIPSNAP1Q9BPW8 284 aa15.57■□□□□ 0.08
LITAF-201ENST00000339430 ZDHHC5Q9C0B5 715 aa15.57■□□□□ 0.08
LITAF-201ENST00000339430 PRDM8Q9NQV8 689 aa15.57■□□□□ 0.08
LITAF-201ENST00000339430 DYRK4Q9NR20 520 aa15.57■□□□□ 0.08
LITAF-201ENST00000339430 SH3GLB1Q9Y371 365 aa15.57■□□□□ 0.08
LITAF-201ENST00000339430 SNX8Q9Y5X2 465 aa15.57■□□□□ 0.08
LITAF-201ENST00000339430 ADRB3P13945 408 aa15.56■□□□□ 0.08
LITAF-201ENST00000339430 POU2F1P14859 743 aa15.56■□□□□ 0.08
LITAF-201ENST00000339430 CD72P21854 359 aa15.56■□□□□ 0.08
LITAF-201ENST00000339430 ST13P50502 369 aaKnown RBP15.56■□□□□ 0.08
LITAF-201ENST00000339430 CYP4F2P78329 520 aa15.56■□□□□ 0.08
LITAF-201ENST00000339430 MVKQ03426 396 aa15.56■□□□□ 0.08
LITAF-201ENST00000339430 VN1R5Q7Z5H4 357 aa15.56■□□□□ 0.08
LITAF-201ENST00000339430 ZNF554Q86TJ5 538 aa15.56■□□□□ 0.08
LITAF-201ENST00000339430 P3H2Q8IVL5 708 aa15.56■□□□□ 0.08
LITAF-201ENST00000339430 SVOPQ8N4V2 548 aa15.56■□□□□ 0.08
LITAF-201ENST00000339430 OR9Q2Q8NGE9 314 aa15.56■□□□□ 0.08
LITAF-201ENST00000339430 GOT1L1Q8NHS2 421 aaPredicted RBP15.56■□□□□ 0.08
LITAF-201ENST00000339430 HRASLS5Q96KN8 279 aa15.56■□□□□ 0.08
LITAF-201ENST00000339430 GABARAPL3Q9BY60 117 aa15.56■□□□□ 0.08
LITAF-201ENST00000339430 C1GALT1Q9NS00 363 aa15.56■□□□□ 0.08
LITAF-201ENST00000339430 PNMA8BQ9ULN7 279 aaPredicted RBP15.56■□□□□ 0.08
LITAF-201ENST00000339430 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP15.56■□□□□ 0.08
LITAF-201ENST00000339430 A0A1W2PRB8 838 aa15.56■□□□□ 0.08
LITAF-201ENST00000339430 C1QTNF3-AMACRE9PGA6 284 aa15.56■□□□□ 0.08
LITAF-201ENST00000339430 M0R129 80 aa15.56■□□□□ 0.08
LITAF-201ENST00000339430 RTCAO00442 366 aaKnown RBP15.56■□□□□ 0.08
LITAF-201ENST00000339430 ADAMDEC1O15204 470 aa15.56■□□□□ 0.08
LITAF-201ENST00000339430 NADKO95544 446 aaPredicted RBP15.56■□□□□ 0.08
LITAF-201ENST00000339430 IDH2P48735 452 aaKnown RBP15.56■□□□□ 0.08
LITAF-201ENST00000339430 NUDT6P53370 316 aa15.56■□□□□ 0.08
LITAF-201ENST00000339430 CDK6Q00534 326 aa15.56■□□□□ 0.08
LITAF-201ENST00000339430 PDE7AQ13946 482 aa15.56■□□□□ 0.08
LITAF-201ENST00000339430 GANABQ14697 944 aaKnown RBP15.56■□□□□ 0.08
LITAF-201ENST00000339430 PRAMEF14Q5SWL7 426 aa15.56■□□□□ 0.08
LITAF-201ENST00000339430 PRAMEF13Q5VWM6 474 aa15.56■□□□□ 0.08
LITAF-201ENST00000339430 KIAA1211LQ6NV74 962 aa15.56■□□□□ 0.08
LITAF-201ENST00000339430 PRSS48Q7RTY5 328 aa15.56■□□□□ 0.08
LITAF-201ENST00000339430 SNX29P2Q8IUI4 249 aa15.56■□□□□ 0.08
LITAF-201ENST00000339430 METTL4Q8N3J2 472 aa15.56■□□□□ 0.08
LITAF-201ENST00000339430 IL17RCQ8NAC3 791 aa15.56■□□□□ 0.08
LITAF-201ENST00000339430 RNF217Q8TC41 542 aa15.56■□□□□ 0.08
LITAF-201ENST00000339430 PROX1Q92786 737 aa15.56■□□□□ 0.08
LITAF-201ENST00000339430 SLC6A16Q9GZN6 736 aa15.56■□□□□ 0.08
LITAF-201ENST00000339430 MYNNQ9NPC7 610 aa15.56■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms