RNA–Protein interactions for RNA: ENST00000338963.6

NEDD4-201, Transcript of neural precursor cell expressed, developmentally down-regulated 4, E3 ubiquitin protein ligase, humanhuman

TSL 1 (best) BASIC

Gene NEDD4, Length 7,019 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4-201ENST00000338963 OR2T35Q8NGX2 323 aa4□□□□□ -1.77
NEDD4-201ENST00000338963 COQ8AQ8NI60 647 aa4□□□□□ -1.77
NEDD4-201ENST00000338963 HAS1Q92839 578 aa4□□□□□ -1.77
NEDD4-201ENST00000338963 MR1Q95460 341 aa4□□□□□ -1.77
NEDD4-201ENST00000338963 SMARCD1Q96GM5 515 aa4□□□□□ -1.77
NEDD4-201ENST00000338963 AIF1LQ9BQI0 150 aa4□□□□□ -1.77
NEDD4-201ENST00000338963 MGME1Q9BQP7 344 aa4□□□□□ -1.77
NEDD4-201ENST00000338963 ASPNQ9BXN1 380 aa4□□□□□ -1.77
NEDD4-201ENST00000338963 TASP1Q9H6P5 420 aa4□□□□□ -1.77
NEDD4-201ENST00000338963 EXO5Q9H790 373 aa4□□□□□ -1.77
NEDD4-201ENST00000338963 EVA1AQ9H8M9 152 aa4□□□□□ -1.77
NEDD4-201ENST00000338963 POPDC2Q9HBU9 364 aa4□□□□□ -1.77
NEDD4-201ENST00000338963 KPTNQ9Y664 436 aa4□□□□□ -1.77
NEDD4-201ENST00000338963 LRRIQ1Q96JM4 1722 aa4□□□□□ -1.77
NEDD4-201ENST00000338963 MROH2AA6NES4 1674 aa4□□□□□ -1.77
NEDD4-201ENST00000338963 A0A096LPK6 155 aa4□□□□□ -1.77
NEDD4-201ENST00000338963 KANTRA0A1W2PQU2 76 aa4□□□□□ -1.77
NEDD4-201ENST00000338963 SLC12A8A0AV02 714 aa4□□□□□ -1.77
NEDD4-201ENST00000338963 PRORSD1PA6NEY8 169 aa4□□□□□ -1.77
NEDD4-201ENST00000338963 SDHDO14521 159 aa4□□□□□ -1.77
NEDD4-201ENST00000338963 TOX3O15405 576 aaPredicted RBP4□□□□□ -1.77
NEDD4-201ENST00000338963 NOBOXO60393 691 aa4□□□□□ -1.77
NEDD4-201ENST00000338963 MED6O75586 246 aa4□□□□□ -1.77
NEDD4-201ENST00000338963 KLK3P07288 261 aaPredicted RBP4□□□□□ -1.77
NEDD4-201ENST00000338963 HCKP08631 526 aa4□□□□□ -1.77
NEDD4-201ENST00000338963 NR2F6P10588 404 aa4□□□□□ -1.77
NEDD4-201ENST00000338963 GABRR1P24046 479 aa4□□□□□ -1.77
NEDD4-201ENST00000338963 KDELR1P24390 212 aa4□□□□□ -1.77
NEDD4-201ENST00000338963 THBS4P35443 961 aa4□□□□□ -1.77
NEDD4-201ENST00000338963 ARF6P62330 175 aa4□□□□□ -1.77
NEDD4-201ENST00000338963 MAP4K2Q12851 820 aa4□□□□□ -1.77
NEDD4-201ENST00000338963 RHEBQ15382 184 aa4□□□□□ -1.77
NEDD4-201ENST00000338963 CELF3Q5SZQ8 465 aaKnown RBP4□□□□□ -1.77
NEDD4-201ENST00000338963 AKR1C8PQ5T2L2 129 aa4□□□□□ -1.77
NEDD4-201ENST00000338963 SLC22A10Q63ZE4 541 aa4□□□□□ -1.77
NEDD4-201ENST00000338963 HHIPL2Q6UWX4 724 aa4□□□□□ -1.77
NEDD4-201ENST00000338963 SERINC5Q86VE9 423 aa4□□□□□ -1.77
NEDD4-201ENST00000338963 RIMKLAQ8IXN7 391 aa4□□□□□ -1.77
NEDD4-201ENST00000338963 ZNF444Q8N0Y2 327 aaPredicted RBP4□□□□□ -1.77
NEDD4-201ENST00000338963 OR4K15Q8NH41 348 aa4□□□□□ -1.77
NEDD4-201ENST00000338963 ACTL9Q8TC94 416 aa4□□□□□ -1.77
NEDD4-201ENST00000338963 TMEM174Q8WUU8 243 aa4□□□□□ -1.77
NEDD4-201ENST00000338963 SNX33Q8WV41 574 aa4□□□□□ -1.77
NEDD4-201ENST00000338963 RTP4Q96DX8 246 aa4□□□□□ -1.77
NEDD4-201ENST00000338963 GFM1Q96RP9 751 aaKnown RBP4□□□□□ -1.77
NEDD4-201ENST00000338963 ADAM33Q9BZ11 813 aa4□□□□□ -1.77
NEDD4-201ENST00000338963 AGO3Q9H9G7 860 aaKnown RBP4□□□□□ -1.77
NEDD4-201ENST00000338963 TEX10Q9NXF1 929 aaPredicted RBP4□□□□□ -1.77
NEDD4-201ENST00000338963 NLKQ9UBE8 527 aa4□□□□□ -1.77
NEDD4-201ENST00000338963 ATXN7L1Q9ULK2 861 aaPredicted RBP4□□□□□ -1.77
NEDD4-201ENST00000338963 SAMD4AQ9UPU9 718 aaKnown RBP4□□□□□ -1.77
NEDD4-201ENST00000338963 WASF3Q9UPY6 502 aa4□□□□□ -1.77
NEDD4-201ENST00000338963 NIP7Q9Y221 180 aaKnown RBP eCLIP4□□□□□ -1.77
NEDD4-201ENST00000338963 V9GYH0 126 aa4□□□□□ -1.77
NEDD4-201ENST00000338963 TCRBV5S2A0A599 114 aa3.99□□□□□ -1.77
NEDD4-201ENST00000338963 PLSCR5A0PG75 271 aa3.99□□□□□ -1.77
NEDD4-201ENST00000338963 C5orf52A6NGY3 159 aa3.99□□□□□ -1.77
NEDD4-201ENST00000338963 HMSDA8MTL9 139 aa3.99□□□□□ -1.77
NEDD4-201ENST00000338963 QSOX1O00391 747 aa3.99□□□□□ -1.77
NEDD4-201ENST00000338963 ALDH1A1P00352 501 aa3.99□□□□□ -1.77
NEDD4-201ENST00000338963 CRYBA1P05813 215 aa3.99□□□□□ -1.77
NEDD4-201ENST00000338963 G6PDP11413 515 aa3.99□□□□□ -1.77
NEDD4-201ENST00000338963 TPH1P17752 444 aa3.99□□□□□ -1.77
NEDD4-201ENST00000338963 KIR2DL3P43628 341 aa3.99□□□□□ -1.77
NEDD4-201ENST00000338963 MBTD1Q05BQ5 628 aa3.99□□□□□ -1.77
NEDD4-201ENST00000338963 ALG11Q2TAA5 492 aa3.99□□□□□ -1.77
NEDD4-201ENST00000338963 C8orf82Q6P1X6 216 aaPredicted RBP3.99□□□□□ -1.77
NEDD4-201ENST00000338963 PADI6Q6TGC4 694 aa3.99□□□□□ -1.77
NEDD4-201ENST00000338963 CD163Q86VB7 1156 aa3.99□□□□□ -1.77
NEDD4-201ENST00000338963 TXNRD3Q86VQ6 643 aa3.99□□□□□ -1.77
NEDD4-201ENST00000338963 Q8N402 240 aa3.99□□□□□ -1.77
NEDD4-201ENST00000338963 SLC44A3Q8N4M1 653 aa3.99□□□□□ -1.77
NEDD4-201ENST00000338963 OR8J3Q8NGG0 315 aa3.99□□□□□ -1.77
NEDD4-201ENST00000338963 OR4Q3Q8NH05 313 aa3.99□□□□□ -1.77
NEDD4-201ENST00000338963 TBCKQ8TEA7 893 aa3.99□□□□□ -1.77
NEDD4-201ENST00000338963 KCTD7Q96MP8 289 aa3.99□□□□□ -1.77
NEDD4-201ENST00000338963 NELL2Q99435 816 aa3.99□□□□□ -1.77
NEDD4-201ENST00000338963 SEPHS2Q99611 448 aa3.99□□□□□ -1.77
NEDD4-201ENST00000338963 PITX2Q99697 317 aa3.99□□□□□ -1.77
NEDD4-201ENST00000338963 ACE2Q9BYF1 805 aaPredicted RBP3.99□□□□□ -1.77
NEDD4-201ENST00000338963 ENKD1Q9H0I2 346 aa3.99□□□□□ -1.77
NEDD4-201ENST00000338963 OR51B6Q9H340 312 aa3.99□□□□□ -1.77
NEDD4-201ENST00000338963 HEXA-AS1Q9H8Q6 139 aa3.99□□□□□ -1.77
NEDD4-201ENST00000338963 IL19Q9UHD0 177 aa3.99□□□□□ -1.77
NEDD4-201ENST00000338963 CPA4Q9UI42 421 aa3.99□□□□□ -1.77
NEDD4-201ENST00000338963 SETD1AO15047 1707 aaKnown RBP3.99□□□□□ -1.77
NEDD4-201ENST00000338963 MAGEB6P1A0A0J9YX57 407 aa3.99□□□□□ -1.77
NEDD4-201ENST00000338963 SURF4O15260 269 aa3.99□□□□□ -1.77
NEDD4-201ENST00000338963 FOXO3O43524 673 aa3.99□□□□□ -1.77
NEDD4-201ENST00000338963 TGM5O43548 720 aa3.99□□□□□ -1.77
NEDD4-201ENST00000338963 PAGE1O75459 146 aa3.99□□□□□ -1.77
NEDD4-201ENST00000338963 CLIC3O95833 236 aa3.99□□□□□ -1.77
NEDD4-201ENST00000338963 GSRP00390 522 aa3.99□□□□□ -1.77
NEDD4-201ENST00000338963 HIST1H1BP16401 226 aaKnown RBP3.99□□□□□ -1.77
NEDD4-201ENST00000338963 MPSTP25325 297 aa3.99□□□□□ -1.77
NEDD4-201ENST00000338963 G0S2P27469 103 aa3.99□□□□□ -1.77
NEDD4-201ENST00000338963 KCNJ3P48549 501 aa3.99□□□□□ -1.77
NEDD4-201ENST00000338963 SLC12A3P55017 1021 aa3.99□□□□□ -1.77
NEDD4-201ENST00000338963 RAB1AP62820 205 aa3.99□□□□□ -1.77
NEDD4-201ENST00000338963 SOX4Q06945 474 aaPredicted RBP3.99□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms