RNA–Protein interactions for RNA: ENST00000338700.9

TRIM2-201, Transcript of tripartite motif containing 2, humanhuman

TSL 1 (best) BASIC

Gene TRIM2, Length 6,735 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM2-201ENST00000338700 PLXDC1Q8IUK5 500 aa7.44□□□□□ -1.22
TRIM2-201ENST00000338700 GLIS1Q8NBF1 620 aa7.44□□□□□ -1.22
TRIM2-201ENST00000338700 PUM2Q8TB72 1066 aaKnown RBP eCLIP7.44□□□□□ -1.22
TRIM2-201ENST00000338700 HTRA1Q92743 480 aa7.44□□□□□ -1.22
TRIM2-201ENST00000338700 TAS2R1Q9NYW7 299 aa7.44□□□□□ -1.22
TRIM2-201ENST00000338700 HCN2Q9UL51 889 aa7.44□□□□□ -1.22
TRIM2-201ENST00000338700 SIT1Q9Y3P8 196 aa7.44□□□□□ -1.22
TRIM2-201ENST00000338700 DDX60Q8IY21 1712 aaKnown RBP7.43□□□□□ -1.22
TRIM2-201ENST00000338700 SOX30O94993 753 aa7.43□□□□□ -1.22
TRIM2-201ENST00000338700 RPP14O95059 124 aaKnown RBP7.43□□□□□ -1.22
TRIM2-201ENST00000338700 CD1DP15813 335 aa7.43□□□□□ -1.22
TRIM2-201ENST00000338700 HOXA11P31270 313 aaPredicted RBP7.43□□□□□ -1.22
TRIM2-201ENST00000338700 ACSL1P33121 698 aa7.43□□□□□ -1.22
TRIM2-201ENST00000338700 AGTR2P50052 363 aa7.43□□□□□ -1.22
TRIM2-201ENST00000338700 OR4D2P58180 307 aa7.43□□□□□ -1.22
TRIM2-201ENST00000338700 TYSND1Q2T9J0 566 aa7.43□□□□□ -1.22
TRIM2-201ENST00000338700 RHEBL1Q8TAI7 183 aa7.43□□□□□ -1.22
TRIM2-201ENST00000338700 RAB2BQ8WUD1 216 aa7.43□□□□□ -1.22
TRIM2-201ENST00000338700 C15orf40Q8WUR7 153 aa7.43□□□□□ -1.22
TRIM2-201ENST00000338700 TSACCQ96A04 125 aaPredicted RBP7.43□□□□□ -1.22
TRIM2-201ENST00000338700 SCGB3A2Q96PL1 93 aa7.43□□□□□ -1.22
TRIM2-201ENST00000338700 TIGARQ9NQ88 270 aa7.43□□□□□ -1.22
TRIM2-201ENST00000338700 PCDHB16Q9NRJ7 776 aa7.43□□□□□ -1.22
TRIM2-201ENST00000338700 ZNF639Q9UID6 485 aa7.43□□□□□ -1.22
TRIM2-201ENST00000338700 SCN7AQ01118 1682 aa7.43□□□□□ -1.22
TRIM2-201ENST00000338700 GLOD5A6NK44 160 aa7.43□□□□□ -1.22
TRIM2-201ENST00000338700 ENTPD6O75354 484 aa7.43□□□□□ -1.22
TRIM2-201ENST00000338700 FPR1P21462 350 aa7.43□□□□□ -1.22
TRIM2-201ENST00000338700 VIPR2P41587 438 aa7.43□□□□□ -1.22
TRIM2-201ENST00000338700 LPAL2Q16609 132 aa7.43□□□□□ -1.22
TRIM2-201ENST00000338700 CYBRD1Q53TN4 286 aa7.43□□□□□ -1.22
TRIM2-201ENST00000338700 ANKRD26P1Q6NSI1 321 aa7.43□□□□□ -1.22
TRIM2-201ENST00000338700 APCDD1Q8J025 514 aa7.43□□□□□ -1.22
TRIM2-201ENST00000338700 LMO3Q8TAP4 145 aa7.43□□□□□ -1.22
TRIM2-201ENST00000338700 TMCO6Q96DC7 493 aa7.43□□□□□ -1.22
TRIM2-201ENST00000338700 NXPE2Q96DL1 559 aa7.43□□□□□ -1.22
TRIM2-201ENST00000338700 GAL3ST1Q99999 423 aa7.43□□□□□ -1.22
TRIM2-201ENST00000338700 YTHDF1Q9BYJ9 559 aaKnown RBP7.43□□□□□ -1.22
TRIM2-201ENST00000338700 RBCK1Q9BYM8 510 aa7.43□□□□□ -1.22
TRIM2-201ENST00000338700 TM9SF3Q9HD45 589 aa7.43□□□□□ -1.22
TRIM2-201ENST00000338700 GLS2Q9UI32 602 aa7.43□□□□□ -1.22
TRIM2-201ENST00000338700 C1orf226A1L170 272 aa7.43□□□□□ -1.22
TRIM2-201ENST00000338700 ADAMTS4O75173 837 aa7.43□□□□□ -1.22
TRIM2-201ENST00000338700 OR2B3O76000 313 aa7.43□□□□□ -1.22
TRIM2-201ENST00000338700 FARS2O95363 451 aaKnown RBP7.43□□□□□ -1.22
TRIM2-201ENST00000338700 HBQ1P09105 142 aa7.43□□□□□ -1.22
TRIM2-201ENST00000338700 IFI30P13284 250 aa7.43□□□□□ -1.22
TRIM2-201ENST00000338700 RNH1P13489 461 aaKnown RBP7.43□□□□□ -1.22
TRIM2-201ENST00000338700 CD9P21926 228 aa7.43□□□□□ -1.22
TRIM2-201ENST00000338700 GADD45AP24522 165 aa7.43□□□□□ -1.22
TRIM2-201ENST00000338700 EIF1AXP47813 144 aaKnown RBP7.43□□□□□ -1.22
TRIM2-201ENST00000338700 CAPZA1P52907 286 aa7.43□□□□□ -1.22
TRIM2-201ENST00000338700 RPS15P62841 145 aaKnown RBP7.43□□□□□ -1.22
TRIM2-201ENST00000338700 PLP2Q04941 152 aa7.43□□□□□ -1.22
TRIM2-201ENST00000338700 SLAMF1Q13291 335 aa7.43□□□□□ -1.22
TRIM2-201ENST00000338700 MRPL49Q13405 166 aaKnown RBP7.43□□□□□ -1.22
TRIM2-201ENST00000338700 CYP27C1Q4G0S4 372 aa7.43□□□□□ -1.22
TRIM2-201ENST00000338700 TMEM35AQ53FP2 167 aa7.43□□□□□ -1.22
TRIM2-201ENST00000338700 HSDL2Q6YN16 418 aa7.43□□□□□ -1.22
TRIM2-201ENST00000338700 SLITRK4Q8IW52 837 aa7.43□□□□□ -1.22
TRIM2-201ENST00000338700 CSNK1A1LQ8N752 337 aa7.43□□□□□ -1.22
TRIM2-201ENST00000338700 ZNF548Q8NEK5 533 aaPredicted RBP7.43□□□□□ -1.22
TRIM2-201ENST00000338700 RARRES3Q9UL19 164 aa7.43□□□□□ -1.22
TRIM2-201ENST00000338700 TBC1D24Q9ULP9 559 aa7.43□□□□□ -1.22
TRIM2-201ENST00000338700 MGAT4BQ9UQ53 548 aa7.43□□□□□ -1.22
TRIM2-201ENST00000338700 EME2A4GXA9 379 aaPredicted RBP7.43□□□□□ -1.22
TRIM2-201ENST00000338700 DPPA5A6NC42 116 aa7.43□□□□□ -1.22
TRIM2-201ENST00000338700 MID1O15344 667 aa7.43□□□□□ -1.22
TRIM2-201ENST00000338700 EMC8O43402 210 aa7.43□□□□□ -1.22
TRIM2-201ENST00000338700 PDYNP01213 254 aa7.43□□□□□ -1.22
TRIM2-201ENST00000338700 GABRA3P34903 492 aa7.43□□□□□ -1.22
TRIM2-201ENST00000338700 TBPL1P62380 186 aa7.43□□□□□ -1.22
TRIM2-201ENST00000338700 CLLU1OSQ5K130 101 aa7.43□□□□□ -1.22
TRIM2-201ENST00000338700 UNC5DQ6UXZ4 953 aa7.43□□□□□ -1.22
TRIM2-201ENST00000338700 CCDC116Q8IYX3 515 aa7.43□□□□□ -1.22
TRIM2-201ENST00000338700 ZNF101Q8IZC7 436 aa7.43□□□□□ -1.22
TRIM2-201ENST00000338700 MRPL43Q8N983 215 aaKnown RBP7.43□□□□□ -1.22
TRIM2-201ENST00000338700 FANK1Q8TC84 345 aa7.43□□□□□ -1.22
TRIM2-201ENST00000338700 ZDHHC1Q8WTX9 485 aa7.43□□□□□ -1.22
TRIM2-201ENST00000338700 NAT14Q8WUY8 206 aa7.43□□□□□ -1.22
TRIM2-201ENST00000338700 PMM1Q92871 262 aa7.43□□□□□ -1.22
TRIM2-201ENST00000338700 IL4I1Q96RQ9 567 aa7.43□□□□□ -1.22
TRIM2-201ENST00000338700 SLC17A9Q9BYT1 436 aa7.43□□□□□ -1.22
TRIM2-201ENST00000338700 SP140LQ9H930 580 aa7.43□□□□□ -1.22
TRIM2-201ENST00000338700 PPP4R1LQ9P1A2 415 aa7.43□□□□□ -1.22
TRIM2-201ENST00000338700 VIRMAQ69YN4 1812 aaKnown RBP7.43□□□□□ -1.22
TRIM2-201ENST00000338700 A0A1B0GVI7 797 aa7.43□□□□□ -1.22
TRIM2-201ENST00000338700 ZNF860A6NHJ4 632 aa7.43□□□□□ -1.22
TRIM2-201ENST00000338700 NPIPA2E9PIF3 369 aa7.43□□□□□ -1.22
TRIM2-201ENST00000338700 NPIPA3F8WFD2 350 aa7.43□□□□□ -1.22
TRIM2-201ENST00000338700 SOX1O00570 391 aaPredicted RBP7.43□□□□□ -1.22
TRIM2-201ENST00000338700 EIF1AYO14602 144 aaKnown RBP7.43□□□□□ -1.22
TRIM2-201ENST00000338700 H6PDO95479 791 aa7.43□□□□□ -1.22
TRIM2-201ENST00000338700 JUPP14923 745 aa7.43□□□□□ -1.22
TRIM2-201ENST00000338700 SLC9A3P48764 834 aa7.43□□□□□ -1.22
TRIM2-201ENST00000338700 RAB28P51157 221 aa7.43□□□□□ -1.22
TRIM2-201ENST00000338700 GSCP56915 257 aaPredicted RBP7.43□□□□□ -1.22
TRIM2-201ENST00000338700 SLC39A11Q8N1S5 342 aa7.43□□□□□ -1.22
TRIM2-201ENST00000338700 NUP43Q8NFH3 380 aa7.43□□□□□ -1.22
TRIM2-201ENST00000338700 TOR1AIP2Q8NFQ8 470 aa7.43□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms