RNA–Protein interactions for RNA: ENST00000338399.8

CDK5RAP3-201, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDK5RAP3, Length 1,866 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-201ENST00000338399 A0A1W2PQM1 296 aa13.98□□□□□ -0.17
CDK5RAP3-201ENST00000338399 PRORSD1PA6NEY8 169 aa13.98□□□□□ -0.17
CDK5RAP3-201ENST00000338399 MAP3K7O43318 606 aa13.98□□□□□ -0.17
CDK5RAP3-201ENST00000338399 PRKRAO75569 313 aaKnown RBP13.98□□□□□ -0.17
CDK5RAP3-201ENST00000338399 ANP32DO95626 131 aa13.98□□□□□ -0.17
CDK5RAP3-201ENST00000338399 RPLP0P05388 317 aaKnown RBP13.98□□□□□ -0.17
CDK5RAP3-201ENST00000338399 CKMT1AP12532 417 aa13.98□□□□□ -0.17
CDK5RAP3-201ENST00000338399 IL1RNP18510 177 aa13.98□□□□□ -0.17
CDK5RAP3-201ENST00000338399 ME2P23368 584 aa13.98□□□□□ -0.17
CDK5RAP3-201ENST00000338399 ARL4DP49703 201 aa13.98□□□□□ -0.17
CDK5RAP3-201ENST00000338399 SELPLGQ14242 412 aa13.98□□□□□ -0.17
CDK5RAP3-201ENST00000338399 KCNAB1Q14722 419 aa13.98□□□□□ -0.17
CDK5RAP3-201ENST00000338399 KPNB1Q14974 876 aaKnown RBP13.98□□□□□ -0.17
CDK5RAP3-201ENST00000338399 LRIF1Q5T3J3 769 aa13.98□□□□□ -0.17
CDK5RAP3-201ENST00000338399 C1orf146Q5VVC0 180 aa13.98□□□□□ -0.17
CDK5RAP3-201ENST00000338399 CYB5D1Q6P9G0 228 aa13.98□□□□□ -0.17
CDK5RAP3-201ENST00000338399 PRSS41Q7RTY9 318 aa13.98□□□□□ -0.17
CDK5RAP3-201ENST00000338399 TMPRSS9Q7Z410 1059 aa13.98□□□□□ -0.17
CDK5RAP3-201ENST00000338399 NET1Q7Z628 596 aaPredicted RBP13.98□□□□□ -0.17
CDK5RAP3-201ENST00000338399 MSRB3Q8IXL7 192 aa13.98□□□□□ -0.17
CDK5RAP3-201ENST00000338399 DNAJB8Q8NHS0 232 aa13.98□□□□□ -0.17
CDK5RAP3-201ENST00000338399 IFI44Q8TCB0 444 aa13.98□□□□□ -0.17
CDK5RAP3-201ENST00000338399 ANKRD27Q96NW4 1050 aa13.98□□□□□ -0.17
CDK5RAP3-201ENST00000338399 PANX1Q96RD7 426 aa13.98□□□□□ -0.17
CDK5RAP3-201ENST00000338399 SERINC2Q96SA4 455 aa13.98□□□□□ -0.17
CDK5RAP3-201ENST00000338399 FAIM2Q9BWQ8 316 aa13.98□□□□□ -0.17
CDK5RAP3-201ENST00000338399 COL25A1Q9BXS0 654 aaPredicted RBP13.98□□□□□ -0.17
CDK5RAP3-201ENST00000338399 LYARQ9NX58 379 aaKnown RBP13.98□□□□□ -0.17
CDK5RAP3-201ENST00000338399 GMPR2Q9P2T1 348 aaKnown RBP13.98□□□□□ -0.17
CDK5RAP3-201ENST00000338399 POMPQ9Y244 141 aa13.98□□□□□ -0.17
CDK5RAP3-201ENST00000338399 L3MBTL1Q9Y468 752 aa13.98□□□□□ -0.17
CDK5RAP3-201ENST00000338399 FRYLO94915 3013 aa13.98□□□□□ -0.17
CDK5RAP3-201ENST00000338399 SCN2AQ99250 2005 aa13.97□□□□□ -0.17
CDK5RAP3-201ENST00000338399 A0A1W2PR48 441 aa13.97□□□□□ -0.17
CDK5RAP3-201ENST00000338399 ZNF860A6NHJ4 632 aa13.97□□□□□ -0.17
CDK5RAP3-201ENST00000338399 RNASET2O00584 256 aaKnown RBP13.97□□□□□ -0.17
CDK5RAP3-201ENST00000338399 TXNDC9O14530 226 aa13.97□□□□□ -0.17
CDK5RAP3-201ENST00000338399 GUCY1B2O75343 617 aa13.97□□□□□ -0.17
CDK5RAP3-201ENST00000338399 ZNF883P0CG24 379 aa13.97□□□□□ -0.17
CDK5RAP3-201ENST00000338399 DRD2P14416 443 aa13.97□□□□□ -0.17
CDK5RAP3-201ENST00000338399 PTPN6P29350 595 aa13.97□□□□□ -0.17
CDK5RAP3-201ENST00000338399 TRPC1P48995 793 aa13.97□□□□□ -0.17
CDK5RAP3-201ENST00000338399 MTPNP58546 118 aa13.97□□□□□ -0.17
CDK5RAP3-201ENST00000338399 HSD11B2P80365 405 aa13.97□□□□□ -0.17
CDK5RAP3-201ENST00000338399 RUNX2Q13950 521 aa13.97□□□□□ -0.17
CDK5RAP3-201ENST00000338399 PRTGQ2VWP7 1150 aa13.97□□□□□ -0.17
CDK5RAP3-201ENST00000338399 SAMD4BQ5PRF9 694 aaKnown RBP13.97□□□□□ -0.17
CDK5RAP3-201ENST00000338399 C6orf163Q5TEZ5 329 aa13.97□□□□□ -0.17
CDK5RAP3-201ENST00000338399 C18orf63Q68DL7 685 aa13.97□□□□□ -0.17
CDK5RAP3-201ENST00000338399 TMEM71Q6P5X7 295 aa13.97□□□□□ -0.17
CDK5RAP3-201ENST00000338399 ZNF574Q6ZN55 896 aaPredicted RBP13.97□□□□□ -0.17
CDK5RAP3-201ENST00000338399 PRSS42Q7Z5A4 293 aa13.97□□□□□ -0.17
CDK5RAP3-201ENST00000338399 FAM47BQ8NA70 645 aa13.97□□□□□ -0.17
CDK5RAP3-201ENST00000338399 N4BP2L2Q92802 583 aaPredicted RBP13.97□□□□□ -0.17
CDK5RAP3-201ENST00000338399 EXOSC8Q96B26 276 aaKnown RBP13.97□□□□□ -0.17
CDK5RAP3-201ENST00000338399 CCDC115Q96NT0 180 aa13.97□□□□□ -0.17
CDK5RAP3-201ENST00000338399 LRRN3Q9H3W5 708 aa13.97□□□□□ -0.17
CDK5RAP3-201ENST00000338399 SYNDIG1Q9H7V2 258 aa13.97□□□□□ -0.17
CDK5RAP3-201ENST00000338399 IRAK4Q9NWZ3 460 aa13.97□□□□□ -0.17
CDK5RAP3-201ENST00000338399 SEMA5BQ9P283 1151 aa13.97□□□□□ -0.17
CDK5RAP3-201ENST00000338399 CD300AQ9UGN4 299 aa13.97□□□□□ -0.17
CDK5RAP3-201ENST00000338399 BTNL2Q9UIR0 455 aa13.97□□□□□ -0.17
CDK5RAP3-201ENST00000338399 ERVK-11Q9UQG0 969 aa13.97□□□□□ -0.17
CDK5RAP3-201ENST00000338399 TRBV5-3A0A0A0MS03 114 aa13.97□□□□□ -0.17
CDK5RAP3-201ENST00000338399 C15orf38-AP3S2A0A0A6YYH1 394 aa13.97□□□□□ -0.17
CDK5RAP3-201ENST00000338399 GLOD5A6NK44 160 aa13.97□□□□□ -0.17
CDK5RAP3-201ENST00000338399 WASHC1A8K0Z3 465 aa13.97□□□□□ -0.17
CDK5RAP3-201ENST00000338399 PROM1O43490 865 aa13.97□□□□□ -0.17
CDK5RAP3-201ENST00000338399 B3GALT2O43825 422 aa13.97□□□□□ -0.17
CDK5RAP3-201ENST00000338399 TBX19O60806 448 aa13.97□□□□□ -0.17
CDK5RAP3-201ENST00000338399 DNAJB6O75190 326 aa13.97□□□□□ -0.17
CDK5RAP3-201ENST00000338399 AIFM1O95831 613 aa13.97□□□□□ -0.17
CDK5RAP3-201ENST00000338399 RETP07949 1114 aa13.97□□□□□ -0.17
CDK5RAP3-201ENST00000338399 HOXB9P17482 250 aaPredicted RBP13.97□□□□□ -0.17
CDK5RAP3-201ENST00000338399 ZNF10P21506 573 aaPredicted RBP13.97□□□□□ -0.17
CDK5RAP3-201ENST00000338399 DUSP3P51452 185 aaPredicted RBP13.97□□□□□ -0.17
CDK5RAP3-201ENST00000338399 OLR1P78380 273 aa13.97□□□□□ -0.17
CDK5RAP3-201ENST00000338399 SQSTM1Q13501 440 aa13.97□□□□□ -0.17
CDK5RAP3-201ENST00000338399 SF3A2Q15428 464 aaKnown RBP13.97□□□□□ -0.17
CDK5RAP3-201ENST00000338399 RUNDC3AQ59EK9 446 aa13.97□□□□□ -0.17
CDK5RAP3-201ENST00000338399 ZNF621Q6ZSS3 439 aa13.97□□□□□ -0.17
CDK5RAP3-201ENST00000338399 ARPINQ7Z6K5 226 aa13.97□□□□□ -0.17
CDK5RAP3-201ENST00000338399 PDSS2Q86YH6 399 aa13.97□□□□□ -0.17
CDK5RAP3-201ENST00000338399 C10orf67Q8IYJ2 551 aa13.97□□□□□ -0.17
CDK5RAP3-201ENST00000338399 AURKBQ96GD4 344 aaPredicted RBP13.97□□□□□ -0.17
CDK5RAP3-201ENST00000338399 ZNF285Q96NJ3 590 aa13.97□□□□□ -0.17
CDK5RAP3-201ENST00000338399 GBP5Q96PP8 586 aa13.97□□□□□ -0.17
CDK5RAP3-201ENST00000338399 DNAAF2Q9NVR5 837 aaKnown RBP13.97□□□□□ -0.17
CDK5RAP3-201ENST00000338399 NAALAD2Q9Y3Q0 740 aa13.97□□□□□ -0.17
CDK5RAP3-201ENST00000338399 SLC22A7Q9Y694 548 aa13.97□□□□□ -0.17
CDK5RAP3-201ENST00000338399 GPR179Q6PRD1 2367 aa13.97□□□□□ -0.17
CDK5RAP3-201ENST00000338399 PGRMC2O15173 223 aa13.96□□□□□ -0.17
CDK5RAP3-201ENST00000338399 NVLO15381 856 aaKnown RBP13.96□□□□□ -0.17
CDK5RAP3-201ENST00000338399 MGRN1O60291 552 aa13.96□□□□□ -0.17
CDK5RAP3-201ENST00000338399 ENTPD5O75356 428 aa13.96□□□□□ -0.17
CDK5RAP3-201ENST00000338399 CPNE6O95741 557 aa13.96□□□□□ -0.17
CDK5RAP3-201ENST00000338399 C6orf47O95873 294 aa13.96□□□□□ -0.17
CDK5RAP3-201ENST00000338399 ABCB1P08183 1280 aaPredicted RBP13.96□□□□□ -0.17
CDK5RAP3-201ENST00000338399 GRK6P43250 576 aa13.96□□□□□ -0.17
CDK5RAP3-201ENST00000338399 ERFP50548 548 aa13.96□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms