RNA–Protein interactions for RNA: ENST00000337331.9

NPHP3-201, Transcript of nephrocystin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NPHP3, Length 4,362 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP3-201ENST00000337331 MAN2B2Q9Y2E5 1009 aa15.47■□□□□ 0.07
NPHP3-201ENST00000337331 ALG5Q9Y673 324 aa15.47■□□□□ 0.07
NPHP3-201ENST00000337331 LOC102723532A0A0G2JNH3 316 aa15.47■□□□□ 0.07
NPHP3-201ENST00000337331 FABP7O15540 132 aa15.47■□□□□ 0.07
NPHP3-201ENST00000337331 CHST10O43529 356 aa15.47■□□□□ 0.07
NPHP3-201ENST00000337331 SH3BP2P78314 561 aa15.47■□□□□ 0.07
NPHP3-201ENST00000337331 EMX2Q04743 252 aa15.47■□□□□ 0.07
NPHP3-201ENST00000337331 NPRL3Q12980 569 aa15.47■□□□□ 0.07
NPHP3-201ENST00000337331 CRHR2Q13324 411 aa15.47■□□□□ 0.07
NPHP3-201ENST00000337331 ELOAQ14241 798 aaKnown RBP15.47■□□□□ 0.07
NPHP3-201ENST00000337331 CARD16Q5EG05 197 aa15.47■□□□□ 0.07
NPHP3-201ENST00000337331 CMTM8Q8IZV2 173 aa15.47■□□□□ 0.07
NPHP3-201ENST00000337331 KCNJ9Q92806 393 aa15.47■□□□□ 0.07
NPHP3-201ENST00000337331 TMEM248Q9NWD8 314 aa15.47■□□□□ 0.07
NPHP3-201ENST00000337331 HPF1Q9NWY4 346 aa15.47■□□□□ 0.07
NPHP3-201ENST00000337331 POM121CA8CG34 1229 aa15.47■□□□□ 0.07
NPHP3-201ENST00000337331 ALDOCP09972 364 aaKnown RBP15.47■□□□□ 0.07
NPHP3-201ENST00000337331 GPR17Q13304 367 aa15.47■□□□□ 0.07
NPHP3-201ENST00000337331 ATP13A5Q4VNC0 1218 aa15.47■□□□□ 0.07
NPHP3-201ENST00000337331 EEF1AKMT2Q5JPI9 291 aaKnown RBP15.47■□□□□ 0.07
NPHP3-201ENST00000337331 SMARCD3Q6STE5 483 aa15.47■□□□□ 0.07
NPHP3-201ENST00000337331 ZNF534Q76KX8 674 aa15.47■□□□□ 0.07
NPHP3-201ENST00000337331 GPRIN1Q7Z2K8 1008 aa15.47■□□□□ 0.07
NPHP3-201ENST00000337331 SPAG16Q8N0X2 631 aa15.47■□□□□ 0.07
NPHP3-201ENST00000337331 TRIB2Q92519 343 aa15.47■□□□□ 0.07
NPHP3-201ENST00000337331 EFCAB11Q9BUY7 163 aa15.47■□□□□ 0.07
NPHP3-201ENST00000337331 RIOK2Q9BVS4 552 aaKnown RBP15.47■□□□□ 0.07
NPHP3-201ENST00000337331 COMMD9Q9P000 198 aa15.47■□□□□ 0.07
NPHP3-201ENST00000337331 IRAK3Q9Y616 596 aa15.47■□□□□ 0.07
NPHP3-201ENST00000337331 NHSL1Q5SYE7 1610 aa15.46■□□□□ 0.07
NPHP3-201ENST00000337331 IQCMA0A1B0GVH7 501 aa15.46■□□□□ 0.07
NPHP3-201ENST00000337331 RAB3BP20337 219 aa15.46■□□□□ 0.07
NPHP3-201ENST00000337331 LIPKQ5VXJ0 399 aa15.46■□□□□ 0.07
NPHP3-201ENST00000337331 SLC16A12Q6ZSM3 486 aa15.46■□□□□ 0.07
NPHP3-201ENST00000337331 Q6ZVU0 165 aa15.46■□□□□ 0.07
NPHP3-201ENST00000337331 DGLUCYQ7Z3D6 616 aa15.46■□□□□ 0.07
NPHP3-201ENST00000337331 TSPYL5Q86VY4 417 aaPredicted RBP15.46■□□□□ 0.07
NPHP3-201ENST00000337331 FTMTQ8N4E7 242 aa15.46■□□□□ 0.07
NPHP3-201ENST00000337331 PKP4Q99569 1192 aa15.46■□□□□ 0.07
NPHP3-201ENST00000337331 PPP6CO00743 305 aa15.46■□□□□ 0.07
NPHP3-201ENST00000337331 SLC31A1O15431 190 aa15.46■□□□□ 0.07
NPHP3-201ENST00000337331 CCNDBP1O95273 360 aa15.46■□□□□ 0.07
NPHP3-201ENST00000337331 CLCN4P51793 760 aa15.46■□□□□ 0.07
NPHP3-201ENST00000337331 SCARB2Q14108 478 aa15.46■□□□□ 0.07
NPHP3-201ENST00000337331 PTGR1Q14914 329 aa15.46■□□□□ 0.07
NPHP3-201ENST00000337331 SPATS1Q496A3 300 aa15.46■□□□□ 0.07
NPHP3-201ENST00000337331 SYT6Q5T7P8 510 aaPredicted RBP15.46■□□□□ 0.07
NPHP3-201ENST00000337331 FUNDC1Q8IVP5 155 aa15.46■□□□□ 0.07
NPHP3-201ENST00000337331 ZNF248Q8NDW4 579 aa15.46■□□□□ 0.07
NPHP3-201ENST00000337331 PIGXQ8TBF5 258 aa15.46■□□□□ 0.07
NPHP3-201ENST00000337331 SLC35G5Q96KT7 338 aa15.46■□□□□ 0.07
NPHP3-201ENST00000337331 MRGPRX2Q96LB1 330 aa15.46■□□□□ 0.07
NPHP3-201ENST00000337331 SLC2A13Q96QE2 648 aa15.46■□□□□ 0.07
NPHP3-201ENST00000337331 OR51V1Q9H2C8 321 aa15.46■□□□□ 0.07
NPHP3-201ENST00000337331 TPT1P8Q9HAU6 139 aa15.46■□□□□ 0.07
NPHP3-201ENST00000337331 PDLIM7Q9NR12 457 aa15.46■□□□□ 0.07
NPHP3-201ENST00000337331 MGAT4BQ9UQ53 548 aa15.46■□□□□ 0.07
NPHP3-201ENST00000337331 HRH3Q9Y5N1 445 aa15.46■□□□□ 0.07
NPHP3-201ENST00000337331 IGKV6-21A0A0C4DH24 114 aa15.46■□□□□ 0.07
NPHP3-201ENST00000337331 ERVH48-1M5A8F1 160 aa15.46■□□□□ 0.07
NPHP3-201ENST00000337331 MANBAO00462 879 aa15.46■□□□□ 0.07
NPHP3-201ENST00000337331 SMCO1Q147U7 214 aa15.46■□□□□ 0.07
NPHP3-201ENST00000337331 CRB2Q5IJ48 1285 aa15.46■□□□□ 0.07
NPHP3-201ENST00000337331 UBE2FQ969M7 185 aa15.46■□□□□ 0.07
NPHP3-201ENST00000337331 SLC35A5Q9BS91 424 aa15.46■□□□□ 0.07
NPHP3-201ENST00000337331 AMBRA1Q9C0C7 1298 aa15.46■□□□□ 0.07
NPHP3-201ENST00000337331 C11orf54Q9H0W9 315 aaPredicted RBP15.46■□□□□ 0.07
NPHP3-201ENST00000337331 KDM3BQ7LBC6 1761 aa15.46■□□□□ 0.06
NPHP3-201ENST00000337331 PRSS44E7EML9 344 aa15.45■□□□□ 0.06
NPHP3-201ENST00000337331 STX16O14662 325 aa15.45■□□□□ 0.06
NPHP3-201ENST00000337331 CAPN5O15484 640 aaPredicted RBP15.45■□□□□ 0.06
NPHP3-201ENST00000337331 LYRM1O43325 122 aa15.45■□□□□ 0.06
NPHP3-201ENST00000337331 NPPAP01160 153 aa15.45■□□□□ 0.06
NPHP3-201ENST00000337331 ADORA3P0DMS8 318 aa15.45■□□□□ 0.06
NPHP3-201ENST00000337331 GABRB3P28472 473 aa15.45■□□□□ 0.06
NPHP3-201ENST00000337331 TGFBR2P37173 567 aa15.45■□□□□ 0.06
NPHP3-201ENST00000337331 IDNKQ5T6J7 187 aa15.45■□□□□ 0.06
NPHP3-201ENST00000337331 FAM171BQ6P995 826 aa15.45■□□□□ 0.06
NPHP3-201ENST00000337331 POMZP3Q6PJE2 187 aa15.45■□□□□ 0.06
NPHP3-201ENST00000337331 LARP4Q71RC2 724 aaKnown RBP eCLIP15.45■□□□□ 0.06
NPHP3-201ENST00000337331 AMZ2Q86W34 360 aa15.45■□□□□ 0.06
NPHP3-201ENST00000337331 ATP6V1C2Q8NEY4 427 aa15.45■□□□□ 0.06
NPHP3-201ENST00000337331 LCN9Q8WX39 176 aa15.45■□□□□ 0.06
NPHP3-201ENST00000337331 RFKQ969G6 155 aa15.45■□□□□ 0.06
NPHP3-201ENST00000337331 CIDECQ96AQ7 238 aaPredicted RBP15.45■□□□□ 0.06
NPHP3-201ENST00000337331 ZSWIM3Q96MP5 696 aa15.45■□□□□ 0.06
NPHP3-201ENST00000337331 C12orf57Q99622 126 aa15.45■□□□□ 0.06
NPHP3-201ENST00000337331 SLIRPQ9GZT3 109 aaKnown RBP15.45■□□□□ 0.06
NPHP3-201ENST00000337331 PHF11Q9UIL8 331 aa15.45■□□□□ 0.06
NPHP3-201ENST00000337331 SCN11AQ9UI33 1791 aa15.45■□□□□ 0.06
NPHP3-201ENST00000337331 COL16A1Q07092 1604 aaPredicted RBP15.45■□□□□ 0.06
NPHP3-201ENST00000337331 MYO10Q9HD67 2058 aa15.45■□□□□ 0.06
NPHP3-201ENST00000337331 WNT9AO14904 365 aa15.45■□□□□ 0.06
NPHP3-201ENST00000337331 RLN1P04808 185 aa15.45■□□□□ 0.06
NPHP3-201ENST00000337331 BMP1P13497 986 aa15.45■□□□□ 0.06
NPHP3-201ENST00000337331 GZMKP49863 264 aa15.45■□□□□ 0.06
NPHP3-201ENST00000337331 GRB14Q14449 540 aa15.45■□□□□ 0.06
NPHP3-201ENST00000337331 GALNT10Q86SR1 603 aa15.45■□□□□ 0.06
NPHP3-201ENST00000337331 NPWQ8N729 165 aa15.45■□□□□ 0.06
NPHP3-201ENST00000337331 OR2T35Q8NGX2 323 aa15.45■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms