RNA–Protein interactions for RNA: ENST00000334136.9

HDAC6-201, Transcript of histone deacetylase 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HDAC6, Length 4,190 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-201ENST00000334136 C9P02748 559 aa11.32□□□□□ -0.6
HDAC6-201ENST00000334136 MPC1LP0DKB6 136 aa11.32□□□□□ -0.6
HDAC6-201ENST00000334136 ITGA2P17301 1181 aa11.32□□□□□ -0.6
HDAC6-201ENST00000334136 FDXRP22570 491 aa11.32□□□□□ -0.6
HDAC6-201ENST00000334136 NOS3P29474 1203 aa11.32□□□□□ -0.6
HDAC6-201ENST00000334136 SLC15A1P46059 708 aa11.32□□□□□ -0.6
HDAC6-201ENST00000334136 ATP12AP54707 1039 aa11.32□□□□□ -0.6
HDAC6-201ENST00000334136 ABATP80404 500 aa11.32□□□□□ -0.6
HDAC6-201ENST00000334136 EIF2B5Q13144 721 aaKnown RBP11.32□□□□□ -0.6
HDAC6-201ENST00000334136 SP140Q13342 867 aa11.32□□□□□ -0.6
HDAC6-201ENST00000334136 LRP8Q14114 963 aa11.32□□□□□ -0.6
HDAC6-201ENST00000334136 KLHL12Q53G59 568 aa11.32□□□□□ -0.6
HDAC6-201ENST00000334136 UNC50Q53HI1 259 aa11.32□□□□□ -0.6
HDAC6-201ENST00000334136 ZNF544Q6NX49 715 aa11.32□□□□□ -0.6
HDAC6-201ENST00000334136 HS3ST5Q8IZT8 346 aa11.32□□□□□ -0.6
HDAC6-201ENST00000334136 RASGEF1AQ8N9B8 481 aa11.32□□□□□ -0.6
HDAC6-201ENST00000334136 ANKRD49Q8WVL7 239 aa11.32□□□□□ -0.6
HDAC6-201ENST00000334136 NARS2Q96I59 477 aaKnown RBP11.32□□□□□ -0.6
HDAC6-201ENST00000334136 BEX2Q9BXY8 128 aa11.32□□□□□ -0.6
HDAC6-201ENST00000334136 MVB12BQ9H7P6 319 aa11.32□□□□□ -0.6
HDAC6-201ENST00000334136 MBNL1Q9NR56 388 aaKnown RBP11.32□□□□□ -0.6
HDAC6-201ENST00000334136 MRPL39Q9NYK5 338 aaKnown RBP11.32□□□□□ -0.6
HDAC6-201ENST00000334136 ERVK-18Q9QC07 812 aa11.32□□□□□ -0.6
HDAC6-201ENST00000334136 TAC3Q9UHF0 121 aa11.32□□□□□ -0.6
HDAC6-201ENST00000334136 HS3ST3A1Q9Y663 406 aa11.32□□□□□ -0.6
HDAC6-201ENST00000334136 RIF1Q5UIP0 2472 aaKnown RBP11.32□□□□□ -0.6
HDAC6-201ENST00000334136 NOTOA8MTQ0 251 aa11.31□□□□□ -0.6
HDAC6-201ENST00000334136 PGRP06401 933 aa11.31□□□□□ -0.6
HDAC6-201ENST00000334136 BMP2P12643 396 aa11.31□□□□□ -0.6
HDAC6-201ENST00000334136 CTBSQ01459 385 aa11.31□□□□□ -0.6
HDAC6-201ENST00000334136 IL18Q14116 193 aa11.31□□□□□ -0.6
HDAC6-201ENST00000334136 DCDC5Q6ZRR9 648 aa11.31□□□□□ -0.6
HDAC6-201ENST00000334136 ZSWIM9Q86XI8 627 aa11.31□□□□□ -0.6
HDAC6-201ENST00000334136 CYP4Z2PQ8N1L4 340 aa11.31□□□□□ -0.6
HDAC6-201ENST00000334136 OR13H1Q8NG92 308 aa11.31□□□□□ -0.6
HDAC6-201ENST00000334136 OR4F6Q8NGB9 312 aa11.31□□□□□ -0.6
HDAC6-201ENST00000334136 OR4A15Q8NGL6 344 aa11.31□□□□□ -0.6
HDAC6-201ENST00000334136 TFAP2CQ92754 450 aa11.31□□□□□ -0.6
HDAC6-201ENST00000334136 SLC32A1Q9H598 525 aa11.31□□□□□ -0.6
HDAC6-201ENST00000334136 C11orf16Q9NQ32 467 aa11.31□□□□□ -0.6
HDAC6-201ENST00000334136 DNMT3AQ9Y6K1 912 aaPredicted RBP11.31□□□□□ -0.6
HDAC6-201ENST00000334136 EP300Q09472 2414 aaPredicted RBP11.31□□□□□ -0.6
HDAC6-201ENST00000334136 A0A1B0GVT2 93 aa11.31□□□□□ -0.6
HDAC6-201ENST00000334136 POM121BA6NF01 834 aa11.31□□□□□ -0.6
HDAC6-201ENST00000334136 PCP4L1A6NKN8 68 aa11.31□□□□□ -0.6
HDAC6-201ENST00000334136 A8MU76 341 aa11.31□□□□□ -0.6
HDAC6-201ENST00000334136 TLR4O00206 839 aa11.31□□□□□ -0.6
HDAC6-201ENST00000334136 NUAK1O60285 661 aa11.31□□□□□ -0.6
HDAC6-201ENST00000334136 CREG1O75629 220 aa11.31□□□□□ -0.6
HDAC6-201ENST00000334136 CSF2P04141 144 aa11.31□□□□□ -0.6
HDAC6-201ENST00000334136 POLR2CP19387 275 aaPredicted RBP11.31□□□□□ -0.6
HDAC6-201ENST00000334136 MYF6P23409 242 aa11.31□□□□□ -0.6
HDAC6-201ENST00000334136 SHMT2P34897 504 aa11.31□□□□□ -0.6
HDAC6-201ENST00000334136 DNAJB13P59910 316 aa11.31□□□□□ -0.6
HDAC6-201ENST00000334136 PPP2CBP62714 309 aa11.31□□□□□ -0.6
HDAC6-201ENST00000334136 PPP2CAP67775 309 aa11.31□□□□□ -0.6
HDAC6-201ENST00000334136 FOXM1Q08050 763 aa11.31□□□□□ -0.6
HDAC6-201ENST00000334136 RPA4Q13156 261 aa11.31□□□□□ -0.6
HDAC6-201ENST00000334136 TUBA3CQ13748 450 aa11.31□□□□□ -0.6
HDAC6-201ENST00000334136 TRIM61Q5EBN2 209 aa11.31□□□□□ -0.6
HDAC6-201ENST00000334136 OR2T5Q6IEZ7 315 aa11.31□□□□□ -0.6
HDAC6-201ENST00000334136 MED27Q6P2C8 311 aa11.31□□□□□ -0.6
HDAC6-201ENST00000334136 SUSD1Q6UWL2 747 aa11.31□□□□□ -0.6
HDAC6-201ENST00000334136 C16orf62Q7Z3J2 963 aa11.31□□□□□ -0.6
HDAC6-201ENST00000334136 LRRC17Q8N6Y2 441 aa11.31□□□□□ -0.6
HDAC6-201ENST00000334136 PLA2G15Q8NCC3 412 aa11.31□□□□□ -0.6
HDAC6-201ENST00000334136 OR2T29Q8NH02 315 aa11.31□□□□□ -0.6
HDAC6-201ENST00000334136 Q96MT0 163 aa11.31□□□□□ -0.6
HDAC6-201ENST00000334136 C1QTNF2Q9BXJ5 285 aa11.31□□□□□ -0.6
HDAC6-201ENST00000334136 MOV10Q9HCE1 1003 aaKnown RBP11.31□□□□□ -0.6
HDAC6-201ENST00000334136 HMX2A2RU54 273 aa11.31□□□□□ -0.6
HDAC6-201ENST00000334136 PLRG1O43660 514 aaKnown RBP11.31□□□□□ -0.6
HDAC6-201ENST00000334136 NDUFB5O43674 189 aa11.31□□□□□ -0.6
HDAC6-201ENST00000334136 DYRK3O43781 588 aa11.31□□□□□ -0.6
HDAC6-201ENST00000334136 TPST2O60704 377 aa11.31□□□□□ -0.6
HDAC6-201ENST00000334136 CCR5P51681 352 aa11.31□□□□□ -0.6
HDAC6-201ENST00000334136 TXNL4AP83876 142 aaKnown RBP11.31□□□□□ -0.6
HDAC6-201ENST00000334136 ATP6AP1Q15904 470 aa11.31□□□□□ -0.6
HDAC6-201ENST00000334136 ADAMTSL4Q6UY14 1074 aa11.31□□□□□ -0.6
HDAC6-201ENST00000334136 IGFN1Q86VF2 1251 aa11.31□□□□□ -0.6
HDAC6-201ENST00000334136 FBXL6Q8N531 539 aa11.31□□□□□ -0.6
HDAC6-201ENST00000334136 ZNF671Q8TAW3 534 aa11.31□□□□□ -0.6
HDAC6-201ENST00000334136 ZDHHC1Q8WTX9 485 aa11.31□□□□□ -0.6
HDAC6-201ENST00000334136 CTPS2Q9NRF8 586 aa11.31□□□□□ -0.6
HDAC6-201ENST00000334136 C14orf119Q9NWQ9 140 aa11.31□□□□□ -0.6
HDAC6-201ENST00000334136 WSB2Q9NYS7 404 aaPredicted RBP11.31□□□□□ -0.6
HDAC6-201ENST00000334136 SERGEFQ9UGK8 458 aa11.31□□□□□ -0.6
HDAC6-201ENST00000334136 MAGEB17A8MXT2 336 aa11.31□□□□□ -0.6
HDAC6-201ENST00000334136 CPNE3O75131 537 aaKnown RBP11.31□□□□□ -0.6
HDAC6-201ENST00000334136 DEFB133Q30KQ1 61 aa11.31□□□□□ -0.6
HDAC6-201ENST00000334136 OR4F3Q6IEY1 312 aa11.31□□□□□ -0.6
HDAC6-201ENST00000334136 C1orf210Q8IVY1 113 aa11.31□□□□□ -0.6
HDAC6-201ENST00000334136 C11orf65Q8NCR3 313 aa11.31□□□□□ -0.6
HDAC6-201ENST00000334136 C7orf57Q8NEG2 295 aa11.31□□□□□ -0.6
HDAC6-201ENST00000334136 LGALS12Q96DT0 336 aa11.31□□□□□ -0.6
HDAC6-201ENST00000334136 NPLQ9BXD5 320 aaPredicted RBP11.31□□□□□ -0.6
HDAC6-201ENST00000334136 MEAF6Q9HAF1 191 aa11.31□□□□□ -0.6
HDAC6-201ENST00000334136 PRDM8Q9NQV8 689 aa11.31□□□□□ -0.6
HDAC6-201ENST00000334136 CMTM6Q9NX76 183 aa11.31□□□□□ -0.6
HDAC6-201ENST00000334136 COMMD3Q9UBI1 195 aa11.31□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms