RNA–Protein interactions for RNA: ENST00000332840.9

SYN3-201, Transcript of synapsin III, humanhuman

TSL 5 BASIC

Gene SYN3, Length 972 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYN3-201ENST00000332840 AP5B1Q2VPB7 878 aa9.26□□□□□ -0.93
SYN3-201ENST00000332840 FAM214AQ32MH5 1076 aa9.26□□□□□ -0.93
SYN3-201ENST00000332840 LINC00303Q3SY05 128 aa9.26□□□□□ -0.93
SYN3-201ENST00000332840 PDCD4Q53EL6 469 aaKnown RBP9.26□□□□□ -0.93
SYN3-201ENST00000332840 SGO1Q5FBB7 561 aa9.26□□□□□ -0.93
SYN3-201ENST00000332840 C10orf62Q5T681 223 aaPredicted RBP9.26□□□□□ -0.93
SYN3-201ENST00000332840 THEMIS2Q5TEJ8 643 aa9.26□□□□□ -0.93
SYN3-201ENST00000332840 PRAMEF9Q5VWM5 478 aa9.26□□□□□ -0.93
SYN3-201ENST00000332840 FRG2Q64ET8 278 aa9.26□□□□□ -0.93
SYN3-201ENST00000332840 HIST2H2AA3Q6FI13 130 aa9.26□□□□□ -0.93
SYN3-201ENST00000332840 SLCO4C1Q6ZQN7 724 aa9.26□□□□□ -0.93
SYN3-201ENST00000332840 GK5Q6ZS86 529 aa9.26□□□□□ -0.93
SYN3-201ENST00000332840 LURAP1LQ8IV03 231 aa9.26□□□□□ -0.93
SYN3-201ENST00000332840 MCATQ8IVS2 390 aaKnown RBP9.26□□□□□ -0.93
SYN3-201ENST00000332840 OR2A1Q8NGT9 310 aa9.26□□□□□ -0.93
SYN3-201ENST00000332840 TSPEARQ8WU66 669 aa9.26□□□□□ -0.93
SYN3-201ENST00000332840 NACC2Q96BF6 587 aa9.26□□□□□ -0.93
SYN3-201ENST00000332840 REPS1Q96D71 796 aa9.26□□□□□ -0.93
SYN3-201ENST00000332840 MTFMTQ96DP5 389 aaKnown RBP9.26□□□□□ -0.93
SYN3-201ENST00000332840 WDR34Q96EX3 536 aa9.26□□□□□ -0.93
SYN3-201ENST00000332840 FRG2BQ96QU4 278 aa9.26□□□□□ -0.93
SYN3-201ENST00000332840 NRTNQ99748 197 aa9.26□□□□□ -0.93
SYN3-201ENST00000332840 ZFYVE21Q9BQ24 234 aa9.26□□□□□ -0.93
SYN3-201ENST00000332840 EFCAB11Q9BUY7 163 aa9.26□□□□□ -0.93
SYN3-201ENST00000332840 SLC25A23Q9BV35 468 aa9.26□□□□□ -0.93
SYN3-201ENST00000332840 BRINP2Q9C0B6 783 aa9.26□□□□□ -0.93
SYN3-201ENST00000332840 CHST8Q9H2A9 424 aa9.26□□□□□ -0.93
SYN3-201ENST00000332840 EHD1Q9H4M9 534 aa9.26□□□□□ -0.93
SYN3-201ENST00000332840 LRTM1Q9HBL6 345 aa9.26□□□□□ -0.93
SYN3-201ENST00000332840 SDR39U1Q9NRG7 319 aaPredicted RBP9.26□□□□□ -0.93
SYN3-201ENST00000332840 NDE1Q9NXR1 346 aa9.26□□□□□ -0.93
SYN3-201ENST00000332840 NOP53Q9NZM5 478 aaKnown RBP9.26□□□□□ -0.93
SYN3-201ENST00000332840 ZIM2Q9NZV7 527 aa9.26□□□□□ -0.93
SYN3-201ENST00000332840 CCDC167Q9P0B6 97 aa9.26□□□□□ -0.93
SYN3-201ENST00000332840 NDOR1Q9UHB4 597 aa9.26□□□□□ -0.93
SYN3-201ENST00000332840 GPN3Q9UHW5 284 aaPredicted RBP9.26□□□□□ -0.93
SYN3-201ENST00000332840 SNX7Q9UNH6 387 aa9.26□□□□□ -0.93
SYN3-201ENST00000332840 EIF3LQ9Y262 564 aaKnown RBP9.26□□□□□ -0.93
SYN3-201ENST00000332840 MAN2B2Q9Y2E5 1009 aa9.26□□□□□ -0.93
SYN3-201ENST00000332840 CCL27Q9Y4X3 112 aa9.26□□□□□ -0.93
SYN3-201ENST00000332840 PCDHGA11Q9Y5H2 935 aa9.26□□□□□ -0.93
SYN3-201ENST00000332840 GPR45Q9Y5Y3 372 aa9.26□□□□□ -0.93
SYN3-201ENST00000332840 CACNA1DQ01668 2161 aa9.26□□□□□ -0.93
SYN3-201ENST00000332840 USP9XQ93008 2570 aaPredicted RBP9.25□□□□□ -0.93
SYN3-201ENST00000332840 A0A1B0GX78 115 aa9.25□□□□□ -0.93
SYN3-201ENST00000332840 CDC14CA4D256 554 aa9.25□□□□□ -0.93
SYN3-201ENST00000332840 BBIP1A8MTZ0 92 aa9.25□□□□□ -0.93
SYN3-201ENST00000332840 NPIPB8E9PQR5 432 aa9.25□□□□□ -0.93
SYN3-201ENST00000332840 H0YIV9 168 aa9.25□□□□□ -0.93
SYN3-201ENST00000332840 H3BMH7 237 aa9.25□□□□□ -0.93
SYN3-201ENST00000332840 MKRN2OSH3BPM6 223 aa9.25□□□□□ -0.93
SYN3-201ENST00000332840 AIM2O14862 343 aa9.25□□□□□ -0.93
SYN3-201ENST00000332840 SEC22BO75396 215 aa9.25□□□□□ -0.93
SYN3-201ENST00000332840 RSL1D1O76021 490 aaKnown RBP9.25□□□□□ -0.93
SYN3-201ENST00000332840 FAM87AP0C7U9 286 aa9.25□□□□□ -0.93
SYN3-201ENST00000332840 PRPH2P23942 346 aa9.25□□□□□ -0.93
SYN3-201ENST00000332840 CPOXP36551 454 aa9.25□□□□□ -0.93
SYN3-201ENST00000332840 GRIA3P42263 894 aa9.25□□□□□ -0.93
SYN3-201ENST00000332840 ELF3P78545 371 aaPredicted RBP9.25□□□□□ -0.93
SYN3-201ENST00000332840 SLC25A3Q00325 362 aa9.25□□□□□ -0.93
SYN3-201ENST00000332840 PRDX1Q06830 199 aaKnown RBP9.25□□□□□ -0.93
SYN3-201ENST00000332840 ERV3-1Q14264 604 aa9.25□□□□□ -0.93
SYN3-201ENST00000332840 DEFB110Q30KQ9 67 aa9.25□□□□□ -0.93
SYN3-201ENST00000332840 DEFB109BQ30KR1 87 aa9.25□□□□□ -0.93
SYN3-201ENST00000332840 MMEL1Q495T6 779 aa9.25□□□□□ -0.93
SYN3-201ENST00000332840 PAGE2BQ5JRK9 111 aa9.25□□□□□ -0.93
SYN3-201ENST00000332840 IL23RQ5VWK5 629 aa9.25□□□□□ -0.93
SYN3-201ENST00000332840 PRAMEF13Q5VWM6 474 aa9.25□□□□□ -0.93
SYN3-201ENST00000332840 ATG9BQ674R7 924 aa9.25□□□□□ -0.93
SYN3-201ENST00000332840 FAM199XQ6PEV8 388 aaPredicted RBP9.25□□□□□ -0.93
SYN3-201ENST00000332840 PAOXQ6QHF9 649 aa9.25□□□□□ -0.93
SYN3-201ENST00000332840 NXPE4Q6UWF7 544 aa9.25□□□□□ -0.93
SYN3-201ENST00000332840 C16orf89Q6UX73 402 aa9.25□□□□□ -0.93
SYN3-201ENST00000332840 RNF44Q7L0R7 432 aa9.25□□□□□ -0.93
SYN3-201ENST00000332840 TMPRSS11BQ86T26 416 aa9.25□□□□□ -0.93
SYN3-201ENST00000332840 C17orf64Q86WR6 236 aa9.25□□□□□ -0.93
SYN3-201ENST00000332840 RAB43Q86YS6 212 aa9.25□□□□□ -0.93
SYN3-201ENST00000332840 APLFQ8IW19 511 aaPredicted RBP9.25□□□□□ -0.93
SYN3-201ENST00000332840 C10orf67Q8IYJ2 551 aa9.25□□□□□ -0.93
SYN3-201ENST00000332840 FAM9CQ8IZT9 166 aa9.25□□□□□ -0.93
SYN3-201ENST00000332840 C2orf73Q8N5S3 287 aaPredicted RBP9.25□□□□□ -0.93
SYN3-201ENST00000332840 ZNF655Q8N720 491 aaPredicted RBP9.25□□□□□ -0.93
SYN3-201ENST00000332840 ENDOVQ8N8Q3 282 aaKnown RBP9.25□□□□□ -0.93
SYN3-201ENST00000332840 SLC38A9Q8NBW4 561 aa9.25□□□□□ -0.93
SYN3-201ENST00000332840 WDR20Q8TBZ3 569 aa9.25□□□□□ -0.93
SYN3-201ENST00000332840 SLC5A11Q8WWX8 675 aa9.25□□□□□ -0.93
SYN3-201ENST00000332840 NEIL2Q969S2 332 aa9.25□□□□□ -0.93
SYN3-201ENST00000332840 UBE2E3Q969T4 207 aa9.25□□□□□ -0.93
SYN3-201ENST00000332840 UTP4Q969X6 686 aaKnown RBP9.25□□□□□ -0.93
SYN3-201ENST00000332840 FKBP10Q96AY3 582 aa9.25□□□□□ -0.93
SYN3-201ENST00000332840 CMTM7Q96FZ5 175 aa9.25□□□□□ -0.93
SYN3-201ENST00000332840 METTL2AQ96IZ6 378 aaKnown RBP9.25□□□□□ -0.93
SYN3-201ENST00000332840 ZNF285Q96NJ3 590 aa9.25□□□□□ -0.93
SYN3-201ENST00000332840 GBP5Q96PP8 586 aa9.25□□□□□ -0.93
SYN3-201ENST00000332840 DPH7Q9BTV6 452 aa9.25□□□□□ -0.93
SYN3-201ENST00000332840 MRPL1Q9BYD6 325 aaKnown RBP9.25□□□□□ -0.93
SYN3-201ENST00000332840 SLC25A18Q9H1K4 315 aa9.25□□□□□ -0.93
SYN3-201ENST00000332840 MRPS30Q9NP92 439 aaKnown RBP9.25□□□□□ -0.93
SYN3-201ENST00000332840 FARSBQ9NSD9 589 aaKnown RBP9.25□□□□□ -0.93
SYN3-201ENST00000332840 STARD5Q9NSY2 213 aa9.25□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms