RNA–Protein interactions for RNA: ENST00000332345.10

LIMS1-201, Transcript of LIM zinc finger domain containing 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene LIMS1, Length 1,235 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS1-201ENST00000332345 SMC6Q96SB8 1091 aa13.18□□□□□ -0.3
LIMS1-201ENST00000332345 SERPINI1Q99574 410 aa13.18□□□□□ -0.3
LIMS1-201ENST00000332345 MESP1Q9BRJ9 268 aa13.18□□□□□ -0.3
LIMS1-201ENST00000332345 ZNF552Q9H707 407 aaPredicted RBP13.18□□□□□ -0.3
LIMS1-201ENST00000332345 NMRK1Q9NWW6 199 aa13.18□□□□□ -0.3
LIMS1-201ENST00000332345 MKS1Q9NXB0 559 aa13.18□□□□□ -0.3
LIMS1-201ENST00000332345 AHSPQ9NZD4 102 aa13.18□□□□□ -0.3
LIMS1-201ENST00000332345 TRPS1Q9UHF7 1281 aa13.18□□□□□ -0.3
LIMS1-201ENST00000332345 DAPP1Q9UN19 280 aa13.18□□□□□ -0.3
LIMS1-201ENST00000332345 PLLPQ9Y342 182 aa13.18□□□□□ -0.3
LIMS1-201ENST00000332345 CNTRLQ7Z7A1 2325 aa13.17□□□□□ -0.3
LIMS1-201ENST00000332345 BLACEA4D250 179 aa13.17□□□□□ -0.3
LIMS1-201ENST00000332345 CCDC151A5D8V7 595 aa13.17□□□□□ -0.3
LIMS1-201ENST00000332345 SYNDIG1LA6NDD5 238 aa13.17□□□□□ -0.3
LIMS1-201ENST00000332345 RTCAO00442 366 aaKnown RBP13.17□□□□□ -0.3
LIMS1-201ENST00000332345 PPP6CO00743 305 aa13.17□□□□□ -0.3
LIMS1-201ENST00000332345 SCELO95171 688 aa13.17□□□□□ -0.3
LIMS1-201ENST00000332345 PDGFAP04085 211 aa13.17□□□□□ -0.3
LIMS1-201ENST00000332345 PRR35P0CG20 571 aa13.17□□□□□ -0.3
LIMS1-201ENST00000332345 NR1D1P20393 614 aa13.17□□□□□ -0.3
LIMS1-201ENST00000332345 CERS1P27544 350 aa13.17□□□□□ -0.3
LIMS1-201ENST00000332345 PKNOX1P55347 436 aa13.17□□□□□ -0.3
LIMS1-201ENST00000332345 HSD17B7P56937 341 aa13.17□□□□□ -0.3
LIMS1-201ENST00000332345 Q0VFX4 171 aa13.17□□□□□ -0.3
LIMS1-201ENST00000332345 LCP2Q13094 533 aa13.17□□□□□ -0.3
LIMS1-201ENST00000332345 SLAMF1Q13291 335 aa13.17□□□□□ -0.3
LIMS1-201ENST00000332345 EXT1Q16394 746 aa13.17□□□□□ -0.3
LIMS1-201ENST00000332345 KRT71Q3SY84 523 aa13.17□□□□□ -0.3
LIMS1-201ENST00000332345 SFT2D3Q587I9 215 aa13.17□□□□□ -0.3
LIMS1-201ENST00000332345 SGO1Q5FBB7 561 aa13.17□□□□□ -0.3
LIMS1-201ENST00000332345 JMJD6Q6NYC1 403 aaPredicted RBP13.17□□□□□ -0.3
LIMS1-201ENST00000332345 LETMD1Q6P1Q0 360 aa13.17□□□□□ -0.3
LIMS1-201ENST00000332345 GPRIN3Q6ZVF9 776 aa13.17□□□□□ -0.3
LIMS1-201ENST00000332345 IQCKQ8N0W5 287 aa13.17□□□□□ -0.3
LIMS1-201ENST00000332345 CCNYL1Q8N7R7 359 aa13.17□□□□□ -0.3
LIMS1-201ENST00000332345 BANPQ8N9N5 519 aa13.17□□□□□ -0.3
LIMS1-201ENST00000332345 LMF1Q96S06 567 aa13.17□□□□□ -0.3
LIMS1-201ENST00000332345 ZNF382Q96SR6 550 aa13.17□□□□□ -0.3
LIMS1-201ENST00000332345 LPAR4Q99677 370 aa13.17□□□□□ -0.3
LIMS1-201ENST00000332345 PRTFDC1Q9NRG1 225 aa13.17□□□□□ -0.3
LIMS1-201ENST00000332345 OXSMQ9NWU1 459 aa13.17□□□□□ -0.3
LIMS1-201ENST00000332345 MS4A12Q9NXJ0 267 aa13.17□□□□□ -0.3
LIMS1-201ENST00000332345 KCMF1Q9P0J7 381 aa13.17□□□□□ -0.3
LIMS1-201ENST00000332345 SENP1Q9P0U3 644 aa13.17□□□□□ -0.3
LIMS1-201ENST00000332345 IGHV3-20A0A0C4DH32 117 aa13.16□□□□□ -0.3
LIMS1-201ENST00000332345 H3BQF6 201 aa13.16□□□□□ -0.3
LIMS1-201ENST00000332345 CYR61O00622 381 aa13.16□□□□□ -0.3
LIMS1-201ENST00000332345 PLPP1O14494 284 aa13.16□□□□□ -0.3
LIMS1-201ENST00000332345 RGS16O15492 202 aaPredicted RBP13.16□□□□□ -0.3
LIMS1-201ENST00000332345 SUV39H1O43463 412 aa13.16□□□□□ -0.3
LIMS1-201ENST00000332345 CTNSO60931 367 aa13.16□□□□□ -0.3
LIMS1-201ENST00000332345 SEC24DO94855 1032 aaPredicted RBP13.16□□□□□ -0.3
LIMS1-201ENST00000332345 OR4F21O95013 312 aa13.16□□□□□ -0.3
LIMS1-201ENST00000332345 KRT6AP02538 564 aa13.16□□□□□ -0.3
LIMS1-201ENST00000332345 KRT6BP04259 564 aa13.16□□□□□ -0.3
LIMS1-201ENST00000332345 MAOAP21397 527 aa13.16□□□□□ -0.3
LIMS1-201ENST00000332345 TLX1P31314 330 aaPredicted RBP13.16□□□□□ -0.3
LIMS1-201ENST00000332345 KRT6CP48668 564 aa13.16□□□□□ -0.3
LIMS1-201ENST00000332345 NAGLUP54802 743 aa13.16□□□□□ -0.3
LIMS1-201ENST00000332345 ASPHQ12797 758 aa13.16□□□□□ -0.3
LIMS1-201ENST00000332345 SLC13A2Q13183 592 aa13.16□□□□□ -0.3
LIMS1-201ENST00000332345 BTBD16Q32M84 506 aa13.16□□□□□ -0.3
LIMS1-201ENST00000332345 LIPMQ5VYY2 423 aa13.16□□□□□ -0.3
LIMS1-201ENST00000332345 PLAG1Q6DJT9 500 aa13.16□□□□□ -0.3
LIMS1-201ENST00000332345 PAPD4Q6PIY7 484 aaKnown RBP13.16□□□□□ -0.3
LIMS1-201ENST00000332345 CYP20A1Q6UW02 462 aa13.16□□□□□ -0.3
LIMS1-201ENST00000332345 IGFL3Q6UXB1 125 aa13.16□□□□□ -0.3
LIMS1-201ENST00000332345 ZNF793Q6ZN11 406 aa13.16□□□□□ -0.3
LIMS1-201ENST00000332345 ATG14Q6ZNE5 492 aa13.16□□□□□ -0.3
LIMS1-201ENST00000332345 PAGE2Q7Z2X7 111 aa13.16□□□□□ -0.3
LIMS1-201ENST00000332345 ZCCHC7Q8N3Z6 543 aaKnown RBP13.16□□□□□ -0.3
LIMS1-201ENST00000332345 ZADH2Q8N4Q0 377 aa13.16□□□□□ -0.3
LIMS1-201ENST00000332345 FAM47BQ8NA70 645 aa13.16□□□□□ -0.3
LIMS1-201ENST00000332345 M1APQ8TC57 530 aa13.16□□□□□ -0.3
LIMS1-201ENST00000332345 METTL6Q8TCB7 284 aa13.16□□□□□ -0.3
LIMS1-201ENST00000332345 SELENOMQ8WWX9 145 aa13.16□□□□□ -0.3
LIMS1-201ENST00000332345 TSLPQ969D9 159 aa13.16□□□□□ -0.3
LIMS1-201ENST00000332345 MS4A3Q96HJ5 214 aa13.16□□□□□ -0.3
LIMS1-201ENST00000332345 APOPT1Q96IL0 206 aa13.16□□□□□ -0.3
LIMS1-201ENST00000332345 SLC29A3Q9BZD2 475 aa13.16□□□□□ -0.3
LIMS1-201ENST00000332345 BRF2Q9HAW0 419 aa13.16□□□□□ -0.3
LIMS1-201ENST00000332345 ZNF225Q9UK10 706 aa13.16□□□□□ -0.3
LIMS1-201ENST00000332345 A0A1B0GTL3 188 aa13.15□□□□□ -0.3
LIMS1-201ENST00000332345 TCRBV16S1A1N1A0A5B0 115 aa13.15□□□□□ -0.3
LIMS1-201ENST00000332345 ULK1O75385 1050 aa13.15□□□□□ -0.3
LIMS1-201ENST00000332345 SEMA3DO95025 777 aa13.15□□□□□ -0.3
LIMS1-201ENST00000332345 ESRRBO95718 433 aa13.15□□□□□ -0.3
LIMS1-201ENST00000332345 PDYNP01213 254 aa13.15□□□□□ -0.3
LIMS1-201ENST00000332345 ENO1P06733 434 aaKnown RBP13.15□□□□□ -0.3
LIMS1-201ENST00000332345 UQCRHP07919 91 aa13.15□□□□□ -0.3
LIMS1-201ENST00000332345 CPN2P22792 545 aa13.15□□□□□ -0.3
LIMS1-201ENST00000332345 HMOX2P30519 316 aa13.15□□□□□ -0.3
LIMS1-201ENST00000332345 ZNF33BQ06732 778 aa13.15□□□□□ -0.3
LIMS1-201ENST00000332345 ZNF844Q08AG5 666 aa13.15□□□□□ -0.3
LIMS1-201ENST00000332345 STX4Q12846 297 aa13.15□□□□□ -0.3
LIMS1-201ENST00000332345 BIKQ13323 160 aa13.15□□□□□ -0.3
LIMS1-201ENST00000332345 CRB2Q5IJ48 1285 aa13.15□□□□□ -0.3
LIMS1-201ENST00000332345 ISLR2Q6UXK2 745 aa13.15□□□□□ -0.3
LIMS1-201ENST00000332345 PRICKLE2Q7Z3G6 844 aa13.15□□□□□ -0.3
LIMS1-201ENST00000332345 GPR180Q86V85 440 aa13.15□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 46.4 ms