RNA–Protein interactions for RNA: ENST00000330949.2

SOX1-201, Transcript of SRY-box 1, humanhuman

APPRIS P1 BASIC

Gene SOX1, Length 2,842 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX1-201ENST00000330949 EXOSC2Q13868 293 aaKnown RBP23.31■■□□□ 1.32
SOX1-201ENST00000330949 IL18Q14116 193 aa23.31■■□□□ 1.32
SOX1-201ENST00000330949 FGFBP1Q14512 234 aa23.31■■□□□ 1.32
SOX1-201ENST00000330949 DGKKQ5KSL6 1271 aa23.31■■□□□ 1.32
SOX1-201ENST00000330949 ZBTB44Q8NCP5 570 aa23.31■■□□□ 1.32
SOX1-201ENST00000330949 GTPBP3Q969Y2 492 aaKnown RBP23.31■■□□□ 1.32
SOX1-201ENST00000330949 FTSJ1Q9UET6 329 aa23.31■■□□□ 1.32
SOX1-201ENST00000330949 ISM1B1AKI9 464 aa23.31■■□□□ 1.32
SOX1-201ENST00000330949 SRSF11Q05519 484 aaKnown RBP23.31■■□□□ 1.32
SOX1-201ENST00000330949 CDH18Q13634 790 aa23.31■■□□□ 1.32
SOX1-201ENST00000330949 FCN2Q15485 313 aa23.31■■□□□ 1.32
SOX1-201ENST00000330949 TEAD4Q15561 434 aa23.31■■□□□ 1.32
SOX1-201ENST00000330949 TMEM107Q6UX40 140 aa23.31■■□□□ 1.32
SOX1-201ENST00000330949 FAM129BQ96TA1 746 aa23.31■■□□□ 1.32
SOX1-201ENST00000330949 PTPN18Q99952 460 aa23.31■■□□□ 1.32
SOX1-201ENST00000330949 TPT1P8Q9HAU6 139 aa23.31■■□□□ 1.32
SOX1-201ENST00000330949 B3GAT2Q9NPZ5 323 aa23.31■■□□□ 1.32
SOX1-201ENST00000330949 COMMD3Q9UBI1 195 aa23.31■■□□□ 1.32
SOX1-201ENST00000330949 ST3GAL5Q9UNP4 418 aa23.31■■□□□ 1.32
SOX1-201ENST00000330949 DNMT3AQ9Y6K1 912 aaPredicted RBP23.31■■□□□ 1.32
SOX1-201ENST00000330949 PCP4L1A6NKN8 68 aa23.3■■□□□ 1.32
SOX1-201ENST00000330949 RAMP2O60895 175 aa23.3■■□□□ 1.32
SOX1-201ENST00000330949 PDYNP01213 254 aa23.3■■□□□ 1.32
SOX1-201ENST00000330949 CLCNKAP51800 687 aa23.3■■□□□ 1.32
SOX1-201ENST00000330949 CRISP1P54107 249 aa23.3■■□□□ 1.32
SOX1-201ENST00000330949 DSTNP60981 165 aa23.3■■□□□ 1.32
SOX1-201ENST00000330949 CPSF6Q16630 551 aaKnown RBP eCLIP23.3■■□□□ 1.32
SOX1-201ENST00000330949 RNLSQ5VYX0 342 aa23.3■■□□□ 1.32
SOX1-201ENST00000330949 ABI3BPQ7Z7G0 1075 aa23.3■■□□□ 1.32
SOX1-201ENST00000330949 MDGA1Q8NFP4 955 aa23.3■■□□□ 1.32
SOX1-201ENST00000330949 PUM2Q8TB72 1066 aaKnown RBP eCLIP23.3■■□□□ 1.32
SOX1-201ENST00000330949 SELENOMQ8WWX9 145 aa23.3■■□□□ 1.32
SOX1-201ENST00000330949 FAM193BQ96PV7 902 aaPredicted RBP23.3■■□□□ 1.32
SOX1-201ENST00000330949 KATNB1Q9BVA0 655 aa23.3■■□□□ 1.32
SOX1-201ENST00000330949 FKBPLQ9UIM3 349 aa23.3■■□□□ 1.32
SOX1-201ENST00000330949 CSNK1G3Q9Y6M4 447 aa23.3■■□□□ 1.32
SOX1-201ENST00000330949 TMEM229AB2RXF0 380 aa23.3■■□□□ 1.32
SOX1-201ENST00000330949 CLDN9O95484 217 aa23.3■■□□□ 1.32
SOX1-201ENST00000330949 PRPS1L1P21108 318 aa23.3■■□□□ 1.32
SOX1-201ENST00000330949 LPOP22079 712 aaPredicted RBP23.3■■□□□ 1.32
SOX1-201ENST00000330949 RPA4Q13156 261 aa23.3■■□□□ 1.32
SOX1-201ENST00000330949 SERINC3Q13530 473 aa23.3■■□□□ 1.32
SOX1-201ENST00000330949 GRB14Q14449 540 aa23.3■■□□□ 1.32
SOX1-201ENST00000330949 IFI44LQ53G44 452 aa23.3■■□□□ 1.32
SOX1-201ENST00000330949 METTL2BQ6P1Q9 378 aaKnown RBP23.3■■□□□ 1.32
SOX1-201ENST00000330949 LRRTM3Q86VH5 581 aa23.3■■□□□ 1.32
SOX1-201ENST00000330949 RBFAQ8N0V3 343 aa23.3■■□□□ 1.32
SOX1-201ENST00000330949 TMEM163Q8TC26 289 aa23.3■■□□□ 1.32
SOX1-201ENST00000330949 FZD4Q9ULV1 537 aa23.3■■□□□ 1.32
SOX1-201ENST00000330949 C17orf102A2RUQ5 167 aa23.29■■□□□ 1.32
SOX1-201ENST00000330949 ARL5CA6NH57 179 aa23.29■■□□□ 1.32
SOX1-201ENST00000330949 CPSF4O95639 269 aaKnown RBP23.29■■□□□ 1.32
SOX1-201ENST00000330949 HLA-FP30511 346 aa23.29■■□□□ 1.32
SOX1-201ENST00000330949 STK19P49842 368 aaPredicted RBP23.29■■□□□ 1.32
SOX1-201ENST00000330949 CRYBB1P53674 252 aaPredicted RBP23.29■■□□□ 1.32
SOX1-201ENST00000330949 HSF2Q03933 536 aa23.29■■□□□ 1.32
SOX1-201ENST00000330949 P2RY14Q15391 338 aa23.29■■□□□ 1.32
SOX1-201ENST00000330949 FRMPD2BQ6IN97 320 aa23.29■■□□□ 1.32
SOX1-201ENST00000330949 LAS2Q8IYD9 372 aa23.29■■□□□ 1.32
SOX1-201ENST00000330949 ZNF683Q8IZ20 524 aa23.29■■□□□ 1.32
SOX1-201ENST00000330949 STK40Q8N2I9 435 aa23.29■■□□□ 1.32
SOX1-201ENST00000330949 UCN3Q969E3 161 aa23.29■■□□□ 1.32
SOX1-201ENST00000330949 DPCDQ9BVM2 203 aaPredicted RBP23.29■■□□□ 1.32
SOX1-201ENST00000330949 APOL5Q9BWW9 433 aa23.29■■□□□ 1.32
SOX1-201ENST00000330949 FAM105AQ9NUU6 356 aa23.29■■□□□ 1.32
SOX1-201ENST00000330949 MALT1Q9UDY8 824 aa23.29■■□□□ 1.32
SOX1-201ENST00000330949 PCDHB11Q9Y5F2 797 aa23.29■■□□□ 1.32
SOX1-201ENST00000330949 ZNF623O75123 536 aa23.29■■□□□ 1.32
SOX1-201ENST00000330949 HLA-EP13747 358 aa23.29■■□□□ 1.32
SOX1-201ENST00000330949 PCGF2P35227 344 aa23.29■■□□□ 1.32
SOX1-201ENST00000330949 LUZP2Q86TE4 346 aa23.29■■□□□ 1.32
SOX1-201ENST00000330949 CMTM7Q96FZ5 175 aa23.29■■□□□ 1.32
SOX1-201ENST00000330949 IL4I1Q96RQ9 567 aa23.29■■□□□ 1.32
SOX1-201ENST00000330949 FAM120CQ9NX05 1096 aaKnown RBP23.29■■□□□ 1.32
SOX1-201ENST00000330949 CORO2BQ9UQ03 480 aa23.29■■□□□ 1.32
SOX1-201ENST00000330949 RPL36Q9Y3U8 105 aaKnown RBP23.29■■□□□ 1.32
SOX1-201ENST00000330949 RAI2Q9Y5P3 530 aa23.29■■□□□ 1.32
SOX1-201ENST00000330949 A0A0A6YYJ9 748 aa23.28■■□□□ 1.32
SOX1-201ENST00000330949 LZTS3O60299 673 aaPredicted RBP23.28■■□□□ 1.32
SOX1-201ENST00000330949 NUDT7P0C024 238 aa23.28■■□□□ 1.32
SOX1-201ENST00000330949 ANXA3P12429 323 aa23.28■■□□□ 1.32
SOX1-201ENST00000330949 RGS4P49798 205 aa23.28■■□□□ 1.32
SOX1-201ENST00000330949 SNRPGP62308 76 aaKnown RBP23.28■■□□□ 1.32
SOX1-201ENST00000330949 SNAPC1Q16533 368 aa23.28■■□□□ 1.32
SOX1-201ENST00000330949 SHEQ5VZ18 495 aa23.28■■□□□ 1.32
SOX1-201ENST00000330949 ZNF57Q68EA5 555 aaPredicted RBP23.28■■□□□ 1.32
SOX1-201ENST00000330949 SCN4BQ8IWT1 228 aa23.28■■□□□ 1.32
SOX1-201ENST00000330949 UBTD2Q8WUN7 234 aa23.28■■□□□ 1.32
SOX1-201ENST00000330949 FNDC3AQ9Y2H6 1198 aaKnown RBP23.28■■□□□ 1.32
SOX1-201ENST00000330949 SNX11Q9Y5W9 270 aa23.28■■□□□ 1.32
SOX1-201ENST00000330949 ATG13O75143 517 aa23.28■■□□□ 1.32
SOX1-201ENST00000330949 STOMP27105 288 aa23.28■■□□□ 1.32
SOX1-201ENST00000330949 BTN1A1Q13410 526 aa23.28■■□□□ 1.32
SOX1-201ENST00000330949 ZNF222Q9UK12 451 aa23.28■■□□□ 1.32
SOX1-201ENST00000330949 SCML1Q9UN30 329 aa23.28■■□□□ 1.32
SOX1-201ENST00000330949 PRAMEF33A0A0G2JMD5 474 aa23.28■■□□□ 1.32
SOX1-201ENST00000330949 PRAMEF10O60809 474 aa23.28■■□□□ 1.32
SOX1-201ENST00000330949 PSIP1O75475 530 aaKnown RBP23.28■■□□□ 1.32
SOX1-201ENST00000330949 ADGRD2Q7Z7M1 963 aa23.28■■□□□ 1.32
SOX1-201ENST00000330949 ANKRD53Q8N9V6 530 aa23.28■■□□□ 1.32
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms