RNA–Protein interactions for RNA: ENST00000327154.10

RPAIN-201, Transcript of RPA interacting protein, humanhuman

TSL 2 BASIC

Gene RPAIN, Length 815 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-201ENST00000327154 LIM2P55344 173 aa13.17□□□□□ -0.3
RPAIN-201ENST00000327154 RAB10P61026 200 aa13.17□□□□□ -0.3
RPAIN-201ENST00000327154 TERF2Q15554 542 aa13.17□□□□□ -0.3
RPAIN-201ENST00000327154 PDK4Q16654 411 aa13.17□□□□□ -0.3
RPAIN-201ENST00000327154 ZNF630Q2M218 657 aaPredicted RBP13.17□□□□□ -0.3
RPAIN-201ENST00000327154 GRTP1Q5TC63 336 aa13.17□□□□□ -0.3
RPAIN-201ENST00000327154 ABHD17CQ6PCB6 329 aa13.17□□□□□ -0.3
RPAIN-201ENST00000327154 XKRXQ6PP77 449 aa13.17□□□□□ -0.3
RPAIN-201ENST00000327154 BNC2Q6ZN30 1099 aaPredicted RBP13.17□□□□□ -0.3
RPAIN-201ENST00000327154 SULF2Q8IWU5 870 aa13.17□□□□□ -0.3
RPAIN-201ENST00000327154 MCEMP1Q8IX19 187 aa13.17□□□□□ -0.3
RPAIN-201ENST00000327154 ZNF595Q8IYB9 648 aa13.17□□□□□ -0.3
RPAIN-201ENST00000327154 TMEM156Q8N614 296 aa13.17□□□□□ -0.3
RPAIN-201ENST00000327154 PPM1NQ8N819 430 aa13.17□□□□□ -0.3
RPAIN-201ENST00000327154 EXT2Q93063 718 aa13.17□□□□□ -0.3
RPAIN-201ENST00000327154 NCLNQ969V3 563 aa13.17□□□□□ -0.3
RPAIN-201ENST00000327154 WDR34Q96EX3 536 aa13.17□□□□□ -0.3
RPAIN-201ENST00000327154 SERINC2Q96SA4 455 aa13.17□□□□□ -0.3
RPAIN-201ENST00000327154 RUBCNLQ9H714 662 aa13.17□□□□□ -0.3
RPAIN-201ENST00000327154 LIN28AQ9H9Z2 209 aaKnown RBP13.17□□□□□ -0.3
RPAIN-201ENST00000327154 PRDM7Q9NQW5 492 aa13.17□□□□□ -0.3
RPAIN-201ENST00000327154 DMGDHQ9UI17 866 aaKnown RBP13.17□□□□□ -0.3
RPAIN-201ENST00000327154 ZNF223Q9UK11 482 aaPredicted RBP13.17□□□□□ -0.3
RPAIN-201ENST00000327154 RNF112Q9ULX5 631 aa13.17□□□□□ -0.3
RPAIN-201ENST00000327154 PPIEQ9UNP9 301 aaKnown RBP13.17□□□□□ -0.3
RPAIN-201ENST00000327154 MRPS33Q9Y291 106 aaKnown RBP13.17□□□□□ -0.3
RPAIN-201ENST00000327154 MEMO1Q9Y316 297 aa13.17□□□□□ -0.3
RPAIN-201ENST00000327154 KLRC4-KLRK1H3BQV0 150 aa13.16□□□□□ -0.3
RPAIN-201ENST00000327154 CTNSO60931 367 aa13.16□□□□□ -0.3
RPAIN-201ENST00000327154 ITGA10O75578 1167 aa13.16□□□□□ -0.3
RPAIN-201ENST00000327154 C1QAP02745 245 aa13.16□□□□□ -0.3
RPAIN-201ENST00000327154 S100BP04271 92 aaPredicted RBP13.16□□□□□ -0.3
RPAIN-201ENST00000327154 IFNA16P05015 189 aa13.16□□□□□ -0.3
RPAIN-201ENST00000327154 SNRPB2P08579 225 aaKnown RBP13.16□□□□□ -0.3
RPAIN-201ENST00000327154 ABOP16442 354 aa13.16□□□□□ -0.3
RPAIN-201ENST00000327154 EPORP19235 508 aa13.16□□□□□ -0.3
RPAIN-201ENST00000327154 CERS1P27544 350 aa13.16□□□□□ -0.3
RPAIN-201ENST00000327154 TNFRSF8P28908 595 aa13.16□□□□□ -0.3
RPAIN-201ENST00000327154 SPRP35270 261 aaPredicted RBP13.16□□□□□ -0.3
RPAIN-201ENST00000327154 RFC3P40938 356 aa13.16□□□□□ -0.3
RPAIN-201ENST00000327154 GPR143P51810 404 aa13.16□□□□□ -0.3
RPAIN-201ENST00000327154 SMSP52788 366 aa13.16□□□□□ -0.3
RPAIN-201ENST00000327154 IRF8Q02556 426 aa13.16□□□□□ -0.3
RPAIN-201ENST00000327154 CHIT1Q13231 466 aa13.16□□□□□ -0.3
RPAIN-201ENST00000327154 LAPTM5Q13571 262 aa13.16□□□□□ -0.3
RPAIN-201ENST00000327154 BMPR2Q13873 1038 aa13.16□□□□□ -0.3
RPAIN-201ENST00000327154 NAA30Q147X3 362 aaPredicted RBP13.16□□□□□ -0.3
RPAIN-201ENST00000327154 ZKSCAN8Q15776 578 aaPredicted RBP13.16□□□□□ -0.3
RPAIN-201ENST00000327154 HIST2H2ACQ16777 129 aaPredicted RBP13.16□□□□□ -0.3
RPAIN-201ENST00000327154 KBTBD12Q3ZCT8 623 aa13.16□□□□□ -0.3
RPAIN-201ENST00000327154 GLE1Q53GS7 698 aaKnown RBP13.16□□□□□ -0.3
RPAIN-201ENST00000327154 HIST2H2AA3Q6FI13 130 aa13.16□□□□□ -0.3
RPAIN-201ENST00000327154 C16orf47Q6ZP98 133 aaPredicted RBP13.16□□□□□ -0.3
RPAIN-201ENST00000327154 MDGA2Q7Z553 956 aa13.16□□□□□ -0.3
RPAIN-201ENST00000327154 DOLPP1Q86YN1 238 aa13.16□□□□□ -0.3
RPAIN-201ENST00000327154 GHDCQ8N2G8 530 aa13.16□□□□□ -0.3
RPAIN-201ENST00000327154 PDPRQ8NCN5 879 aa13.16□□□□□ -0.3
RPAIN-201ENST00000327154 STAG3L4Q8TBR4 150 aa13.16□□□□□ -0.3
RPAIN-201ENST00000327154 IFT81Q8WYA0 676 aa13.16□□□□□ -0.3
RPAIN-201ENST00000327154 VMP1Q96GC9 406 aa13.16□□□□□ -0.3
RPAIN-201ENST00000327154 CSF3RQ99062 836 aa13.16□□□□□ -0.3
RPAIN-201ENST00000327154 CCDC77Q9BR77 488 aa13.16□□□□□ -0.3
RPAIN-201ENST00000327154 EFCAB11Q9BUY7 163 aa13.16□□□□□ -0.3
RPAIN-201ENST00000327154 CD244Q9BZW8 370 aa13.16□□□□□ -0.3
RPAIN-201ENST00000327154 ALG9Q9H6U8 611 aa13.16□□□□□ -0.3
RPAIN-201ENST00000327154 COPS7BQ9H9Q2 264 aaPredicted RBP13.16□□□□□ -0.3
RPAIN-201ENST00000327154 CHST11Q9NPF2 352 aa13.16□□□□□ -0.3
RPAIN-201ENST00000327154 DAPP1Q9UN19 280 aa13.16□□□□□ -0.3
RPAIN-201ENST00000327154 KLF13Q9Y2Y9 288 aaPredicted RBP13.16□□□□□ -0.3
RPAIN-201ENST00000327154 ASB1Q9Y576 335 aa13.16□□□□□ -0.3
RPAIN-201ENST00000327154 PEX1O43933 1283 aa13.15□□□□□ -0.3
RPAIN-201ENST00000327154 PRKNO60260 465 aaPredicted RBP13.15□□□□□ -0.3
RPAIN-201ENST00000327154 ZFAND5O76080 213 aa13.15□□□□□ -0.3
RPAIN-201ENST00000327154 TFEBP19484 476 aa13.15□□□□□ -0.3
RPAIN-201ENST00000327154 PTGER1P34995 402 aa13.15□□□□□ -0.3
RPAIN-201ENST00000327154 MAGEA4P43358 317 aa13.15□□□□□ -0.3
RPAIN-201ENST00000327154 MEOX1P50221 254 aa13.15□□□□□ -0.3
RPAIN-201ENST00000327154 TGM3Q08188 693 aa13.15□□□□□ -0.3
RPAIN-201ENST00000327154 DLG1Q12959 904 aa13.15□□□□□ -0.3
RPAIN-201ENST00000327154 EFTUD2Q15029 972 aaKnown RBP eCLIP13.15□□□□□ -0.3
RPAIN-201ENST00000327154 PAGE2BQ5JRK9 111 aa13.15□□□□□ -0.3
RPAIN-201ENST00000327154 C3P1Q6ZMU1 363 aa13.15□□□□□ -0.3
RPAIN-201ENST00000327154 NCCRP1Q6ZVX7 275 aaPredicted RBP13.15□□□□□ -0.3
RPAIN-201ENST00000327154 RAPH1Q70E73 1250 aa13.15□□□□□ -0.3
RPAIN-201ENST00000327154 FGD2Q7Z6J4 655 aa13.15□□□□□ -0.3
RPAIN-201ENST00000327154 UBE3DQ7Z6J8 389 aa13.15□□□□□ -0.3
RPAIN-201ENST00000327154 CMC1Q7Z7K0 106 aa13.15□□□□□ -0.3
RPAIN-201ENST00000327154 ISCA2Q86U28 154 aa13.15□□□□□ -0.3
RPAIN-201ENST00000327154 CHERPQ8IWX8 916 aaKnown RBP13.15□□□□□ -0.3
RPAIN-201ENST00000327154 CYP4Z2PQ8N1L4 340 aa13.15□□□□□ -0.3
RPAIN-201ENST00000327154 TMEM132CQ8N3T6 1108 aa13.15□□□□□ -0.3
RPAIN-201ENST00000327154 POGLUT1Q8NBL1 392 aa13.15□□□□□ -0.3
RPAIN-201ENST00000327154 FBF1Q8TES7 1133 aa13.15□□□□□ -0.3
RPAIN-201ENST00000327154 AGAP11Q8TF27 550 aa13.15□□□□□ -0.3
RPAIN-201ENST00000327154 SREK1Q8WXA9 508 aaKnown RBP13.15□□□□□ -0.3
RPAIN-201ENST00000327154 PHF12Q96QT6 1004 aa13.15□□□□□ -0.3
RPAIN-201ENST00000327154 ALOXE3Q9BYJ1 711 aa13.15□□□□□ -0.3
RPAIN-201ENST00000327154 PHACTR1Q9C0D0 580 aa13.15□□□□□ -0.3
RPAIN-201ENST00000327154 PRM3Q9NNZ6 103 aa13.15□□□□□ -0.3
RPAIN-201ENST00000327154 ADAP2Q9NPF8 381 aa13.15□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 53.3 ms