RNA–Protein interactions for RNA: ENST00000324685.10

RNF40-201, Transcript of ring finger protein 40, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RNF40, Length 5,634 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40-201ENST00000324685 PDYNP01213 254 aa20.27■□□□□ 0.83
RNF40-201ENST00000324685 RHBDF1Q96CC6 855 aa20.27■□□□□ 0.83
RNF40-201ENST00000324685 NEDD4LQ96PU5 975 aa20.27■□□□□ 0.83
RNF40-201ENST00000324685 PCDHB3Q9Y5E6 796 aa20.27■□□□□ 0.83
RNF40-201ENST00000324685 CLCA1A8K7I4 914 aa20.26■□□□□ 0.83
RNF40-201ENST00000324685 E2F3O00716 465 aa20.26■□□□□ 0.83
RNF40-201ENST00000324685 ACRP10323 421 aa20.26■□□□□ 0.83
RNF40-201ENST00000324685 HTR1EP28566 365 aa20.26■□□□□ 0.83
RNF40-201ENST00000324685 GGT5P36269 586 aa20.26■□□□□ 0.83
RNF40-201ENST00000324685 CLCA4Q14CN2 919 aa20.26■□□□□ 0.83
RNF40-201ENST00000324685 HSD17B12Q53GQ0 312 aa20.26■□□□□ 0.83
RNF40-201ENST00000324685 PIGGQ5H8A4 983 aa20.26■□□□□ 0.83
RNF40-201ENST00000324685 HAGHLQ6PII5 290 aaPredicted RBP20.26■□□□□ 0.83
RNF40-201ENST00000324685 XKR5Q6UX68 686 aa20.26■□□□□ 0.83
RNF40-201ENST00000324685 ZNF280BQ86YH2 543 aa20.26■□□□□ 0.83
RNF40-201ENST00000324685 CLDN19Q8N6F1 224 aa20.26■□□□□ 0.83
RNF40-201ENST00000324685 OR51G2Q8NGK0 314 aa20.26■□□□□ 0.83
RNF40-201ENST00000324685 ELP5Q8TE02 316 aa20.26■□□□□ 0.83
RNF40-201ENST00000324685 OARD1Q9Y530 152 aa20.26■□□□□ 0.83
RNF40-201ENST00000324685 SLC35F4A4IF30 521 aa20.26■□□□□ 0.83
RNF40-201ENST00000324685 GRID2O43424 1007 aa20.26■□□□□ 0.83
RNF40-201ENST00000324685 GBAP04062 536 aa20.26■□□□□ 0.83
RNF40-201ENST00000324685 DHPSP49366 369 aaPredicted RBP20.26■□□□□ 0.83
RNF40-201ENST00000324685 ST3GAL4Q11206 333 aa20.26■□□□□ 0.83
RNF40-201ENST00000324685 TMEM236Q5W0B7 351 aa20.26■□□□□ 0.83
RNF40-201ENST00000324685 ZNF783Q6ZMS7 281 aa20.26■□□□□ 0.83
RNF40-201ENST00000324685 CARM1Q86X55 608 aa20.26■□□□□ 0.83
RNF40-201ENST00000324685 PIAS4Q8N2W9 510 aaPredicted RBP20.26■□□□□ 0.83
RNF40-201ENST00000324685 SAMD12Q8N8I0 201 aa20.26■□□□□ 0.83
RNF40-201ENST00000324685 C1orf74Q96LT6 269 aa20.26■□□□□ 0.83
RNF40-201ENST00000324685 TIGARQ9NQ88 270 aa20.26■□□□□ 0.83
RNF40-201ENST00000324685 PCDH10Q9P2E7 1040 aa20.26■□□□□ 0.83
RNF40-201ENST00000324685 KCNN3Q9UGI6 736 aa20.26■□□□□ 0.83
RNF40-201ENST00000324685 ACSL5Q9ULC5 683 aa20.26■□□□□ 0.83
RNF40-201ENST00000324685 INSL6Q9Y581 213 aa20.26■□□□□ 0.83
RNF40-201ENST00000324685 H7C2Y5 167 aa20.26■□□□□ 0.83
RNF40-201ENST00000324685 EDNRBP24530 442 aa20.26■□□□□ 0.83
RNF40-201ENST00000324685 KCNJ5P48544 419 aa20.26■□□□□ 0.83
RNF40-201ENST00000324685 TBRG1Q3YBR2 411 aa20.26■□□□□ 0.83
RNF40-201ENST00000324685 CHRFAM7AQ494W8 412 aa20.26■□□□□ 0.83
RNF40-201ENST00000324685 SLC27A4Q6P1M0 643 aa20.26■□□□□ 0.83
RNF40-201ENST00000324685 KCTD18Q6PI47 426 aaPredicted RBP20.26■□□□□ 0.83
RNF40-201ENST00000324685 DOHHQ9BU89 302 aa20.26■□□□□ 0.83
RNF40-201ENST00000324685 SLC2A4RGQ9NR83 387 aa20.26■□□□□ 0.83
RNF40-201ENST00000324685 SOX1O00570 391 aaPredicted RBP20.26■□□□□ 0.83
RNF40-201ENST00000324685 SOCS5O75159 536 aa20.26■□□□□ 0.83
RNF40-201ENST00000324685 TRAPPC6AO75865 159 aa20.26■□□□□ 0.83
RNF40-201ENST00000324685 CTBP2P56545 445 aa20.26■□□□□ 0.83
RNF40-201ENST00000324685 POU4F2Q12837 409 aa20.26■□□□□ 0.83
RNF40-201ENST00000324685 FADDQ13158 208 aa20.26■□□□□ 0.83
RNF40-201ENST00000324685 RIN1Q13671 783 aa20.26■□□□□ 0.83
RNF40-201ENST00000324685 TCEAL1Q15170 157 aa20.26■□□□□ 0.83
RNF40-201ENST00000324685 UGT8Q16880 541 aa20.26■□□□□ 0.83
RNF40-201ENST00000324685 GLIS1Q8NBF1 620 aa20.26■□□□□ 0.83
RNF40-201ENST00000324685 CD93Q9NPY3 652 aa20.26■□□□□ 0.83
RNF40-201ENST00000324685 PADI2Q9Y2J8 665 aa20.26■□□□□ 0.83
RNF40-201ENST00000324685 DLDP09622 509 aaKnown RBP20.25■□□□□ 0.83
RNF40-201ENST00000324685 TYRP14679 529 aa20.25■□□□□ 0.83
RNF40-201ENST00000324685 PROZP22891 400 aa20.25■□□□□ 0.83
RNF40-201ENST00000324685 ZNF81P51508 661 aa20.25■□□□□ 0.83
RNF40-201ENST00000324685 FLYWCH1Q4VC44 716 aa20.25■□□□□ 0.83
RNF40-201ENST00000324685 LRRN1Q6UXK5 716 aa20.25■□□□□ 0.83
RNF40-201ENST00000324685 OR2T33Q8NG76 320 aa20.25■□□□□ 0.83
RNF40-201ENST00000324685 TMEM234Q8WY98 164 aa20.25■□□□□ 0.83
RNF40-201ENST00000324685 CAPNS2Q96L46 248 aa20.25■□□□□ 0.83
RNF40-201ENST00000324685 SMOQ99835 787 aa20.25■□□□□ 0.83
RNF40-201ENST00000324685 MEAF6Q9HAF1 191 aa20.25■□□□□ 0.83
RNF40-201ENST00000324685 SLC45A1Q9Y2W3 748 aa20.25■□□□□ 0.83
RNF40-201ENST00000324685 PFKLP17858 780 aa20.25■□□□□ 0.83
RNF40-201ENST00000324685 GPR17Q13304 367 aa20.25■□□□□ 0.83
RNF40-201ENST00000324685 PPP1R3FQ6ZSY5 799 aaPredicted RBP20.25■□□□□ 0.83
RNF40-201ENST00000324685 ZFAND4Q86XD8 727 aa20.25■□□□□ 0.83
RNF40-201ENST00000324685 SLC45A3Q96JT2 553 aa20.25■□□□□ 0.83
RNF40-201ENST00000324685 NECAB3Q96P71 396 aaPredicted RBP20.25■□□□□ 0.83
RNF40-201ENST00000324685 LIN28AQ9H9Z2 209 aaKnown RBP20.25■□□□□ 0.83
RNF40-201ENST00000324685 HRH2P25021 359 aa20.25■□□□□ 0.83
RNF40-201ENST00000324685 C6orf136Q5SQH8 315 aa20.25■□□□□ 0.83
RNF40-201ENST00000324685 SLC35F1Q5T1Q4 408 aa20.25■□□□□ 0.83
RNF40-201ENST00000324685 RPS27LQ71UM5 84 aaKnown RBP20.25■□□□□ 0.83
RNF40-201ENST00000324685 ZNF584Q8IVC4 421 aa20.25■□□□□ 0.83
RNF40-201ENST00000324685 ZNF283Q8N7M2 679 aa20.25■□□□□ 0.83
RNF40-201ENST00000324685 TXNDC5Q8NBS9 432 aaKnown RBP20.25■□□□□ 0.83
RNF40-201ENST00000324685 THAP4Q8WY91 577 aa20.25■□□□□ 0.83
RNF40-201ENST00000324685 RNF39Q9H2S5 420 aa20.25■□□□□ 0.83
RNF40-201ENST00000324685 CUEDC1Q9NWM3 386 aaPredicted RBP20.25■□□□□ 0.83
RNF40-201ENST00000324685 FXYD6P3P58550 94 aa20.25■□□□□ 0.83
RNF40-201ENST00000324685 OLIG2Q13516 323 aa20.25■□□□□ 0.83
RNF40-201ENST00000324685 NOXRED1Q6NXP6 359 aa20.25■□□□□ 0.83
RNF40-201ENST00000324685 BEND4Q6ZU67 534 aa20.25■□□□□ 0.83
RNF40-201ENST00000324685 NEIL3Q8TAT5 605 aa20.25■□□□□ 0.83
RNF40-201ENST00000324685 PUM2Q8TB72 1066 aaKnown RBP eCLIP20.25■□□□□ 0.83
RNF40-201ENST00000324685 ACTR6Q9GZN1 396 aa20.25■□□□□ 0.83
RNF40-201ENST00000324685 RETREG1Q9H6L5 497 aa20.25■□□□□ 0.83
RNF40-201ENST00000324685 C3P01024 1663 aa20.25■□□□□ 0.83
RNF40-201ENST00000324685 GPR89AB7ZAQ6 455 aa20.25■□□□□ 0.83
RNF40-201ENST00000324685 GABBR2O75899 941 aa20.25■□□□□ 0.83
RNF40-201ENST00000324685 GPR89BP0CG08 455 aa20.25■□□□□ 0.83
RNF40-201ENST00000324685 GTF2F2P13984 249 aa20.25■□□□□ 0.83
RNF40-201ENST00000324685 ENDOUP21128 410 aaKnown RBP20.25■□□□□ 0.83
RNF40-201ENST00000324685 LAPTM4AQ15012 233 aa20.25■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms