RNA–Protein interactions for RNA: ENST00000324444.7

SYNE4-201, Transcript of spectrin repeat containing nuclear envelope family member 4, humanhuman

APPRIS P3 TSL 5 BASIC

Gene SYNE4, Length 1,354 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE4-201ENST00000324444 IFI44Q8TCB0 444 aa17.12■□□□□ 0.33
SYNE4-201ENST00000324444 UTP15Q8TED0 518 aaKnown RBP17.12■□□□□ 0.33
SYNE4-201ENST00000324444 KLHL6Q8WZ60 621 aa17.12■□□□□ 0.33
SYNE4-201ENST00000324444 PPCDCQ96CD2 204 aa17.12■□□□□ 0.33
SYNE4-201ENST00000324444 COQ8BQ96D53 544 aa17.12■□□□□ 0.33
SYNE4-201ENST00000324444 NPAS2Q99743 824 aa17.12■□□□□ 0.33
SYNE4-201ENST00000324444 SH3GL1Q99961 368 aa17.12■□□□□ 0.33
SYNE4-201ENST00000324444 NPLQ9BXD5 320 aaPredicted RBP17.12■□□□□ 0.33
SYNE4-201ENST00000324444 KLHL25Q9H0H3 589 aa17.12■□□□□ 0.33
SYNE4-201ENST00000324444 WDR41Q9HAD4 459 aa17.12■□□□□ 0.33
SYNE4-201ENST00000324444 SLC52A3Q9NQ40 469 aa17.12■□□□□ 0.33
SYNE4-201ENST00000324444 PRDM7Q9NQW5 492 aa17.12■□□□□ 0.33
SYNE4-201ENST00000324444 ENAMQ9NRM1 1142 aa17.12■□□□□ 0.33
SYNE4-201ENST00000324444 EHD3Q9NZN3 535 aa17.12■□□□□ 0.33
SYNE4-201ENST00000324444 FAM208BQ5VWN6 2430 aa17.12■□□□□ 0.33
SYNE4-201ENST00000324444 CELSR3Q9NYQ7 3312 aa17.12■□□□□ 0.33
SYNE4-201ENST00000324444 UNC13CQ8NB66 2214 aa17.11■□□□□ 0.33
SYNE4-201ENST00000324444 IGHV5-51A0A0C4DH38 117 aa17.11■□□□□ 0.33
SYNE4-201ENST00000324444 FBP2O00757 339 aa17.11■□□□□ 0.33
SYNE4-201ENST00000324444 B3GALT2O43825 422 aa17.11■□□□□ 0.33
SYNE4-201ENST00000324444 ERN1O75460 977 aaKnown RBP17.11■□□□□ 0.33
SYNE4-201ENST00000324444 FAM58BPP0C7Q3 252 aa17.11■□□□□ 0.33
SYNE4-201ENST00000324444 SMIM10L1P0DMW3 83 aa17.11■□□□□ 0.33
SYNE4-201ENST00000324444 NQO1P15559 274 aaKnown RBP17.11■□□□□ 0.33
SYNE4-201ENST00000324444 ITGAXP20702 1163 aa17.11■□□□□ 0.33
SYNE4-201ENST00000324444 DDCP20711 480 aa17.11■□□□□ 0.33
SYNE4-201ENST00000324444 CPOXP36551 454 aa17.11■□□□□ 0.33
SYNE4-201ENST00000324444 PGM1P36871 562 aa17.11■□□□□ 0.33
SYNE4-201ENST00000324444 ZFP36L2P47974 494 aaKnown RBP17.11■□□□□ 0.33
SYNE4-201ENST00000324444 CORO7P57737 925 aa17.11■□□□□ 0.33
SYNE4-201ENST00000324444 E2F1Q01094 437 aa17.11■□□□□ 0.33
SYNE4-201ENST00000324444 TLR1Q15399 786 aa17.11■□□□□ 0.33
SYNE4-201ENST00000324444 PGS1Q32NB8 556 aa17.11■□□□□ 0.33
SYNE4-201ENST00000324444 TRMT5Q32P41 509 aaKnown RBP17.11■□□□□ 0.33
SYNE4-201ENST00000324444 SPANXN4Q5MJ08 99 aa17.11■□□□□ 0.33
SYNE4-201ENST00000324444 WASHC2DQ5SRD0 308 aa17.11■□□□□ 0.33
SYNE4-201ENST00000324444 PERM1Q5SV97 790 aa17.11■□□□□ 0.33
SYNE4-201ENST00000324444 C6orf163Q5TEZ5 329 aa17.11■□□□□ 0.33
SYNE4-201ENST00000324444 HES3Q5TGS1 186 aa17.11■□□□□ 0.33
SYNE4-201ENST00000324444 YOD1Q5VVQ6 348 aaPredicted RBP17.11■□□□□ 0.33
SYNE4-201ENST00000324444 FRMPD2BQ6IN97 320 aa17.11■□□□□ 0.33
SYNE4-201ENST00000324444 TMEM214Q6NUQ4 689 aaKnown RBP17.11■□□□□ 0.33
SYNE4-201ENST00000324444 USP53Q70EK8 1073 aa17.11■□□□□ 0.33
SYNE4-201ENST00000324444 UBE3DQ7Z6J8 389 aa17.11■□□□□ 0.33
SYNE4-201ENST00000324444 D2HGDHQ8N465 521 aa17.11■□□□□ 0.33
SYNE4-201ENST00000324444 KRTCAP2Q8N6L1 136 aa17.11■□□□□ 0.33
SYNE4-201ENST00000324444 TTC29Q8NA56 475 aaPredicted RBP17.11■□□□□ 0.33
SYNE4-201ENST00000324444 SMIM10Q96HG1 83 aa17.11■□□□□ 0.33
SYNE4-201ENST00000324444 SLC41A2Q96JW4 573 aa17.11■□□□□ 0.33
SYNE4-201ENST00000324444 EGLN2Q96KS0 407 aa17.11■□□□□ 0.33
SYNE4-201ENST00000324444 PPM1MQ96MI6 270 aa17.11■□□□□ 0.33
SYNE4-201ENST00000324444 ZNF285Q96NJ3 590 aa17.11■□□□□ 0.33
SYNE4-201ENST00000324444 FCRL4Q96PJ5 515 aa17.11■□□□□ 0.33
SYNE4-201ENST00000324444 DUSP26Q9BV47 211 aa17.11■□□□□ 0.33
SYNE4-201ENST00000324444 ZNF717Q9BY31 904 aaPredicted RBP17.11■□□□□ 0.33
SYNE4-201ENST00000324444 ZNF768Q9H5H4 540 aaKnown RBP17.11■□□□□ 0.33
SYNE4-201ENST00000324444 PDP2Q9P2J9 529 aa17.11■□□□□ 0.33
SYNE4-201ENST00000324444 RRP15Q9Y3B9 282 aaKnown RBP17.11■□□□□ 0.33
SYNE4-201ENST00000324444 COL27A1Q8IZC6 1860 aaPredicted RBP17.1■□□□□ 0.33
SYNE4-201ENST00000324444 LOC105369274A0A096LPK9 316 aa17.1■□□□□ 0.33
SYNE4-201ENST00000324444 LOC102723532A0A0G2JNH3 316 aa17.1■□□□□ 0.33
SYNE4-201ENST00000324444 C1orf226A1L170 272 aa17.1■□□□□ 0.33
SYNE4-201ENST00000324444 H0YHG0 523 aa17.1■□□□□ 0.33
SYNE4-201ENST00000324444 AKAP10O43572 662 aa17.1■□□□□ 0.33
SYNE4-201ENST00000324444 LRATO95237 230 aa17.1■□□□□ 0.33
SYNE4-201ENST00000324444 RPLP0P05388 317 aaKnown RBP17.1■□□□□ 0.33
SYNE4-201ENST00000324444 HOXB3P14651 431 aaPredicted RBP17.1■□□□□ 0.33
SYNE4-201ENST00000324444 TLX1P31314 330 aaPredicted RBP17.1■□□□□ 0.33
SYNE4-201ENST00000324444 BUD31P41223 144 aaPredicted RBP17.1■□□□□ 0.33
SYNE4-201ENST00000324444 TRPC1P48995 793 aa17.1■□□□□ 0.33
SYNE4-201ENST00000324444 BTN3A2P78410 334 aa17.1■□□□□ 0.33
SYNE4-201ENST00000324444 ACY1Q03154 408 aa17.1■□□□□ 0.33
SYNE4-201ENST00000324444 SLAMF1Q13291 335 aa17.1■□□□□ 0.33
SYNE4-201ENST00000324444 TRA2AQ13595 282 aaKnown RBP eCLIP17.1■□□□□ 0.33
SYNE4-201ENST00000324444 PDE7AQ13946 482 aa17.1■□□□□ 0.33
SYNE4-201ENST00000324444 FAM53BQ14153 422 aa17.1■□□□□ 0.33
SYNE4-201ENST00000324444 GRM7Q14831 915 aa17.1■□□□□ 0.33
SYNE4-201ENST00000324444 FAM214AQ32MH5 1076 aa17.1■□□□□ 0.33
SYNE4-201ENST00000324444 SAMD14Q8IZD0 417 aaPredicted RBP17.1■□□□□ 0.33
SYNE4-201ENST00000324444 DEFB107AQ8IZN7 70 aa17.1■□□□□ 0.33
SYNE4-201ENST00000324444 OR4N4Q8N0Y3 316 aa17.1■□□□□ 0.33
SYNE4-201ENST00000324444 KCT2Q8NC54 265 aa17.1■□□□□ 0.33
SYNE4-201ENST00000324444 VPS33AQ96AX1 596 aa17.1■□□□□ 0.33
SYNE4-201ENST00000324444 TM4SF18Q96CE8 201 aa17.1■□□□□ 0.33
SYNE4-201ENST00000324444 KLHL31Q9H511 634 aa17.1■□□□□ 0.33
SYNE4-201ENST00000324444 ANKHQ9HCJ1 492 aa17.1■□□□□ 0.33
SYNE4-201ENST00000324444 FAM60AQ9NP50 221 aa17.1■□□□□ 0.33
SYNE4-201ENST00000324444 SPAG4Q9NPE6 437 aa17.1■□□□□ 0.33
SYNE4-201ENST00000324444 PSME2Q9UL46 239 aa17.1■□□□□ 0.33
SYNE4-201ENST00000324444 PCDHGB4Q9UN71 923 aa17.1■□□□□ 0.33
SYNE4-201ENST00000324444 LAMA5O15230 3695 aa17.09■□□□□ 0.33
SYNE4-201ENST00000324444 PRSS51A0A1B0GVH4 220 aa17.09■□□□□ 0.33
SYNE4-201ENST00000324444 RTCAO00442 366 aaKnown RBP17.09■□□□□ 0.33
SYNE4-201ENST00000324444 IL3P08700 152 aa17.09■□□□□ 0.33
SYNE4-201ENST00000324444 FURINP09958 794 aa17.09■□□□□ 0.33
SYNE4-201ENST00000324444 ZNF888P0CJ79 500 aaPredicted RBP17.09■□□□□ 0.33
SYNE4-201ENST00000324444 NELFEP18615 380 aaKnown RBP17.09■□□□□ 0.33
SYNE4-201ENST00000324444 CSF2RBP32927 897 aa17.09■□□□□ 0.33
SYNE4-201ENST00000324444 RAB8AP61006 207 aa17.09■□□□□ 0.33
SYNE4-201ENST00000324444 PSME3P61289 254 aa17.09■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms