RNA–Protein interactions for RNA: ENST00000315962.8

TRIM55-202, Transcript of tripartite motif containing 55, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM55, Length 2,914 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM55-202ENST00000315962 ZNF99A8MXY4 864 aaPredicted RBP7.27□□□□□ -1.25
TRIM55-202ENST00000315962 QSOX1O00391 747 aa7.27□□□□□ -1.25
TRIM55-202ENST00000315962 CXCR6O00574 342 aa7.27□□□□□ -1.25
TRIM55-202ENST00000315962 FPGTO14772 594 aa7.27□□□□□ -1.25
TRIM55-202ENST00000315962 SLC16A5O15375 505 aa7.27□□□□□ -1.25
TRIM55-202ENST00000315962 PCDH7O60245 1069 aa7.27□□□□□ -1.25
TRIM55-202ENST00000315962 RASGRP1O95267 797 aa7.27□□□□□ -1.25
TRIM55-202ENST00000315962 IL6P05231 212 aa7.27□□□□□ -1.25
TRIM55-202ENST00000315962 ACPPP15309 386 aa7.27□□□□□ -1.25
TRIM55-202ENST00000315962 ENGP17813 658 aa7.27□□□□□ -1.25
TRIM55-202ENST00000315962 GGT1P19440 569 aa7.27□□□□□ -1.25
TRIM55-202ENST00000315962 MAOBP27338 520 aa7.27□□□□□ -1.25
TRIM55-202ENST00000315962 TPMTP51580 245 aa7.27□□□□□ -1.25
TRIM55-202ENST00000315962 CLDN8P56748 225 aa7.27□□□□□ -1.25
TRIM55-202ENST00000315962 SNRPNP63162 240 aaKnown RBP7.27□□□□□ -1.25
TRIM55-202ENST00000315962 C1orf61Q13536 156 aa7.27□□□□□ -1.25
TRIM55-202ENST00000315962 NPTX1Q15818 432 aa7.27□□□□□ -1.25
TRIM55-202ENST00000315962 PRSS53Q2L4Q9 553 aa7.27□□□□□ -1.25
TRIM55-202ENST00000315962 PRAMEF13Q5VWM6 474 aa7.27□□□□□ -1.25
TRIM55-202ENST00000315962 LIPJQ5W064 366 aa7.27□□□□□ -1.25
TRIM55-202ENST00000315962 TMIGD1Q6UXZ0 262 aa7.27□□□□□ -1.25
TRIM55-202ENST00000315962 B3GNT8Q7Z7M8 397 aa7.27□□□□□ -1.25
TRIM55-202ENST00000315962 FAM129CQ86XR2 697 aa7.27□□□□□ -1.25
TRIM55-202ENST00000315962 TP53I13Q8NBR0 393 aaPredicted RBP7.27□□□□□ -1.25
TRIM55-202ENST00000315962 ZNF540Q8NDQ6 660 aa7.27□□□□□ -1.25
TRIM55-202ENST00000315962 DOK4Q8TEW6 326 aa7.27□□□□□ -1.25
TRIM55-202ENST00000315962 SLC5A11Q8WWX8 675 aa7.27□□□□□ -1.25
TRIM55-202ENST00000315962 RORBQ92753 470 aa7.27□□□□□ -1.25
TRIM55-202ENST00000315962 RAD51AP1Q96B01 352 aa7.27□□□□□ -1.25
TRIM55-202ENST00000315962 DACH2Q96NX9 599 aa7.27□□□□□ -1.25
TRIM55-202ENST00000315962 SLC29A3Q9BZD2 475 aa7.27□□□□□ -1.25
TRIM55-202ENST00000315962 SPHK1Q9NYA1 384 aa7.27□□□□□ -1.25
TRIM55-202ENST00000315962 TAS2R16Q9NYV7 291 aa7.27□□□□□ -1.25
TRIM55-202ENST00000315962 KLHL42Q9P2K6 505 aa7.27□□□□□ -1.25
TRIM55-202ENST00000315962 MAGEL2Q9UJ55 1249 aa7.27□□□□□ -1.25
TRIM55-202ENST00000315962 CA14Q9ULX7 337 aa7.27□□□□□ -1.25
TRIM55-202ENST00000315962 TMA7Q9Y2S6 64 aaKnown RBP7.27□□□□□ -1.25
TRIM55-202ENST00000315962 SNX11Q9Y5W9 270 aa7.27□□□□□ -1.25
TRIM55-202ENST00000315962 GPC6Q9Y625 555 aaPredicted RBP7.27□□□□□ -1.25
TRIM55-202ENST00000315962 VEGFDO43915 354 aa7.27□□□□□ -1.25
TRIM55-202ENST00000315962 OPN1SWP03999 348 aa7.27□□□□□ -1.25
TRIM55-202ENST00000315962 POU2F2P09086 479 aa7.27□□□□□ -1.25
TRIM55-202ENST00000315962 C1GALT1C1LP0DN25 315 aa7.27□□□□□ -1.25
TRIM55-202ENST00000315962 TNFRSF1BP20333 461 aa7.27□□□□□ -1.25
TRIM55-202ENST00000315962 CD6P30203 668 aa7.27□□□□□ -1.25
TRIM55-202ENST00000315962 ISL1P61371 349 aa7.27□□□□□ -1.25
TRIM55-202ENST00000315962 PPP2R2BQ00005 443 aa7.27□□□□□ -1.25
TRIM55-202ENST00000315962 SELENBP1Q13228 472 aa7.27□□□□□ -1.25
TRIM55-202ENST00000315962 MAD2L1Q13257 205 aaPredicted RBP7.27□□□□□ -1.25
TRIM55-202ENST00000315962 ZNF846Q147U1 533 aa7.27□□□□□ -1.25
TRIM55-202ENST00000315962 FAM214AQ32MH5 1076 aa7.27□□□□□ -1.25
TRIM55-202ENST00000315962 BCL7AQ4VC05 210 aa7.27□□□□□ -1.25
TRIM55-202ENST00000315962 ZNF385BQ569K4 471 aa7.27□□□□□ -1.25
TRIM55-202ENST00000315962 DDX59Q5T1V6 619 aaKnown RBP eCLIP7.27□□□□□ -1.25
TRIM55-202ENST00000315962 PDZD3Q86UT5 571 aa7.27□□□□□ -1.25
TRIM55-202ENST00000315962 GALNT13Q8IUC8 556 aa7.27□□□□□ -1.25
TRIM55-202ENST00000315962 ZNF548Q8NEK5 533 aaPredicted RBP7.27□□□□□ -1.25
TRIM55-202ENST00000315962 PROX1Q92786 737 aa7.27□□□□□ -1.25
TRIM55-202ENST00000315962 MUL1Q969V5 352 aa7.27□□□□□ -1.25
TRIM55-202ENST00000315962 PPP1R14BQ96C90 147 aa7.27□□□□□ -1.25
TRIM55-202ENST00000315962 FAM120BQ96EK7 910 aaKnown RBP7.27□□□□□ -1.25
TRIM55-202ENST00000315962 CMTM7Q96FZ5 175 aa7.27□□□□□ -1.25
TRIM55-202ENST00000315962 MSLNLQ96KJ4 702 aa7.27□□□□□ -1.25
TRIM55-202ENST00000315962 OSBPL10Q9BXB5 764 aa7.27□□□□□ -1.25
TRIM55-202ENST00000315962 TCEAL2Q9H3H9 227 aaPredicted RBP7.27□□□□□ -1.25
TRIM55-202ENST00000315962 SYNPO2LQ9H987 977 aa7.27□□□□□ -1.25
TRIM55-202ENST00000315962 HMG20AQ9NP66 347 aa7.27□□□□□ -1.25
TRIM55-202ENST00000315962 AKIP1Q9NQ31 210 aa7.27□□□□□ -1.25
TRIM55-202ENST00000315962 ATAD3AQ9NVI7 634 aa7.27□□□□□ -1.25
TRIM55-202ENST00000315962 CYP8B1Q9UNU6 501 aa7.27□□□□□ -1.25
TRIM55-202ENST00000315962 GPR34Q9UPC5 381 aa7.27□□□□□ -1.25
TRIM55-202ENST00000315962 LRRK1Q38SD2 2015 aa7.26□□□□□ -1.25
TRIM55-202ENST00000315962 A0A096LPI6 279 aa7.26□□□□□ -1.25
TRIM55-202ENST00000315962 H0YAE9 185 aa7.26□□□□□ -1.25
TRIM55-202ENST00000315962 STK25O00506 426 aa7.26□□□□□ -1.25
TRIM55-202ENST00000315962 NDUFB5O43674 189 aa7.26□□□□□ -1.25
TRIM55-202ENST00000315962 FAM20BO75063 409 aa7.26□□□□□ -1.25
TRIM55-202ENST00000315962 UGT2B11O75310 529 aa7.26□□□□□ -1.25
TRIM55-202ENST00000315962 ADH1BP00325 375 aa7.26□□□□□ -1.25
TRIM55-202ENST00000315962 VIPP01282 170 aa7.26□□□□□ -1.25
TRIM55-202ENST00000315962 CELA2BP08218 269 aaPredicted RBP7.26□□□□□ -1.25
TRIM55-202ENST00000315962 PCMT1P22061 227 aa7.26□□□□□ -1.25
TRIM55-202ENST00000315962 IGFBP5P24593 272 aa7.26□□□□□ -1.25
TRIM55-202ENST00000315962 C21orf33P30042 268 aaPredicted RBP7.26□□□□□ -1.25
TRIM55-202ENST00000315962 PCYT1AP49585 367 aa7.26□□□□□ -1.25
TRIM55-202ENST00000315962 CRISP3P54108 245 aa7.26□□□□□ -1.25
TRIM55-202ENST00000315962 CDK5R2Q13319 367 aa7.26□□□□□ -1.25
TRIM55-202ENST00000315962 GRHL2Q6ISB3 625 aa7.26□□□□□ -1.25
TRIM55-202ENST00000315962 NXPE4Q6UWF7 544 aa7.26□□□□□ -1.25
TRIM55-202ENST00000315962 NEK10Q6ZWH5 1172 aa7.26□□□□□ -1.25
TRIM55-202ENST00000315962 VN1R5Q7Z5H4 357 aa7.26□□□□□ -1.25
TRIM55-202ENST00000315962 ANKRD13BQ86YJ7 626 aa7.26□□□□□ -1.25
TRIM55-202ENST00000315962 POC5Q8NA72 575 aa7.26□□□□□ -1.25
TRIM55-202ENST00000315962 OR5K2Q8NHB8 316 aa7.26□□□□□ -1.25
TRIM55-202ENST00000315962 RAB7BQ96AH8 199 aa7.26□□□□□ -1.25
TRIM55-202ENST00000315962 TPD52L3Q96J77 140 aa7.26□□□□□ -1.25
TRIM55-202ENST00000315962 APOOQ9BUR5 198 aa7.26□□□□□ -1.25
TRIM55-202ENST00000315962 TEX101Q9BY14 249 aa7.26□□□□□ -1.25
TRIM55-202ENST00000315962 KAT8Q9H7Z6 458 aaKnown RBP7.26□□□□□ -1.25
TRIM55-202ENST00000315962 ANKRA2Q9H9E1 313 aa7.26□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms