RNA–Protein interactions for RNA: ENST00000311943.11

SCFD1-201, Transcript of sec1 family domain containing 1, humanhuman

TSL 2

Gene SCFD1, Length 2,016 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-201ENST00000311943 GRID1Q9ULK0 1009 aa11.31□□□□□ -0.6
SCFD1-201ENST00000311943 CNTRLQ7Z7A1 2325 aa11.3□□□□□ -0.6
SCFD1-201ENST00000311943 LOC102723996A0A087X1L8 192 aa11.3□□□□□ -0.6
SCFD1-201ENST00000311943 MKRN2OSH3BPM6 223 aa11.3□□□□□ -0.6
SCFD1-201ENST00000311943 HRKO00198 91 aa11.3□□□□□ -0.6
SCFD1-201ENST00000311943 TYROBPO43914 113 aa11.3□□□□□ -0.6
SCFD1-201ENST00000311943 GSTA1P08263 222 aa11.3□□□□□ -0.6
SCFD1-201ENST00000311943 PRR35P0CG20 571 aa11.3□□□□□ -0.6
SCFD1-201ENST00000311943 SSR2P43308 183 aa11.3□□□□□ -0.6
SCFD1-201ENST00000311943 CCT5P48643 541 aa11.3□□□□□ -0.6
SCFD1-201ENST00000311943 MTTPP55157 894 aa11.3□□□□□ -0.6
SCFD1-201ENST00000311943 LAPTM5Q13571 262 aa11.3□□□□□ -0.6
SCFD1-201ENST00000311943 OR4C11Q6IEV9 310 aa11.3□□□□□ -0.6
SCFD1-201ENST00000311943 CPEB2Q7Z5Q1 589 aaKnown RBP11.3□□□□□ -0.6
SCFD1-201ENST00000311943 PPWD1Q96BP3 646 aaKnown RBP11.3□□□□□ -0.6
SCFD1-201ENST00000311943 L3HYPDHQ96EM0 354 aa11.3□□□□□ -0.6
SCFD1-201ENST00000311943 ATP13A2Q9NQ11 1180 aa11.3□□□□□ -0.6
SCFD1-201ENST00000311943 C14orf105Q9NVL8 296 aa11.3□□□□□ -0.6
SCFD1-201ENST00000311943 OXSMQ9NWU1 459 aa11.3□□□□□ -0.6
SCFD1-201ENST00000311943 PCDHGA11Q9Y5H2 935 aa11.3□□□□□ -0.6
SCFD1-201ENST00000311943 IGKV3D-11A0A0A0MRZ8 115 aa11.3□□□□□ -0.6
SCFD1-201ENST00000311943 A0A1W2PR48 441 aa11.3□□□□□ -0.6
SCFD1-201ENST00000311943 EIF4E1BA6NMX2 242 aaKnown RBP11.3□□□□□ -0.6
SCFD1-201ENST00000311943 A8MUI8 341 aa11.3□□□□□ -0.6
SCFD1-201ENST00000311943 B3GALT2O43825 422 aa11.3□□□□□ -0.6
SCFD1-201ENST00000311943 FGF17O60258 216 aa11.3□□□□□ -0.6
SCFD1-201ENST00000311943 PRMT3O60678 531 aa11.3□□□□□ -0.6
SCFD1-201ENST00000311943 WISP2O76076 250 aa11.3□□□□□ -0.6
SCFD1-201ENST00000311943 KLK1P06870 262 aa11.3□□□□□ -0.6
SCFD1-201ENST00000311943 TAC1P20366 129 aa11.3□□□□□ -0.6
SCFD1-201ENST00000311943 BTKQ06187 659 aa11.3□□□□□ -0.6
SCFD1-201ENST00000311943 IGFBP7Q16270 282 aa11.3□□□□□ -0.6
SCFD1-201ENST00000311943 BTBD16Q32M84 506 aa11.3□□□□□ -0.6
SCFD1-201ENST00000311943 LACTB2Q53H82 288 aaPredicted RBP11.3□□□□□ -0.6
SCFD1-201ENST00000311943 TCTN3Q6NUS6 607 aa11.3□□□□□ -0.6
SCFD1-201ENST00000311943 PAPD4Q6PIY7 484 aaKnown RBP11.3□□□□□ -0.6
SCFD1-201ENST00000311943 NDUFAF7Q7L592 441 aa11.3□□□□□ -0.6
SCFD1-201ENST00000311943 EFCAB3Q8N7B9 438 aa11.3□□□□□ -0.6
SCFD1-201ENST00000311943 TTLQ8NG68 377 aa11.3□□□□□ -0.6
SCFD1-201ENST00000311943 AGAP11Q8TF27 550 aa11.3□□□□□ -0.6
SCFD1-201ENST00000311943 THAP3Q8WTV1 239 aaPredicted RBP11.3□□□□□ -0.6
SCFD1-201ENST00000311943 SELENOMQ8WWX9 145 aa11.3□□□□□ -0.6
SCFD1-201ENST00000311943 CMTM7Q96FZ5 175 aa11.3□□□□□ -0.6
SCFD1-201ENST00000311943 FER1L6-AS2Q96M78 137 aa11.3□□□□□ -0.6
SCFD1-201ENST00000311943 EPN3Q9H201 632 aa11.3□□□□□ -0.6
SCFD1-201ENST00000311943 GIMAP2Q9UG22 337 aa11.3□□□□□ -0.6
SCFD1-201ENST00000311943 SLC12A4Q9UP95 1085 aa11.3□□□□□ -0.6
SCFD1-201ENST00000311943 NBASA2RRP1 2371 aa11.29□□□□□ -0.6
SCFD1-201ENST00000311943 URADA6NGE7 173 aa11.29□□□□□ -0.6
SCFD1-201ENST00000311943 B8ZZF3 427 aa11.29□□□□□ -0.6
SCFD1-201ENST00000311943 MANBAO00462 879 aa11.29□□□□□ -0.6
SCFD1-201ENST00000311943 PGRMC2O15173 223 aa11.29□□□□□ -0.6
SCFD1-201ENST00000311943 RNH1P13489 461 aaKnown RBP11.29□□□□□ -0.6
SCFD1-201ENST00000311943 TPP2P29144 1249 aaPredicted RBP11.29□□□□□ -0.6
SCFD1-201ENST00000311943 GALNT1Q10472 559 aaPredicted RBP11.29□□□□□ -0.6
SCFD1-201ENST00000311943 SLC13A2Q13183 592 aa11.29□□□□□ -0.6
SCFD1-201ENST00000311943 MYBPC3Q14896 1274 aa11.29□□□□□ -0.6
SCFD1-201ENST00000311943 GPRIN3Q6ZVF9 776 aa11.29□□□□□ -0.6
SCFD1-201ENST00000311943 Q8NA96 180 aa11.29□□□□□ -0.6
SCFD1-201ENST00000311943 METTL6Q8TCB7 284 aa11.29□□□□□ -0.6
SCFD1-201ENST00000311943 ANKRD9Q96BM1 317 aaPredicted RBP11.29□□□□□ -0.6
SCFD1-201ENST00000311943 WBP1Q96G27 269 aa11.29□□□□□ -0.6
SCFD1-201ENST00000311943 APIPQ96GX9 242 aa11.29□□□□□ -0.6
SCFD1-201ENST00000311943 KCNC2Q96PR1 638 aa11.29□□□□□ -0.6
SCFD1-201ENST00000311943 SERINC2Q96SA4 455 aa11.29□□□□□ -0.6
SCFD1-201ENST00000311943 ACPTQ9BZG2 426 aa11.29□□□□□ -0.6
SCFD1-201ENST00000311943 ROPN1BQ9BZX4 212 aaPredicted RBP11.29□□□□□ -0.6
SCFD1-201ENST00000311943 C20orf27Q9GZN8 174 aa11.29□□□□□ -0.6
SCFD1-201ENST00000311943 ZNF700Q9H0M5 742 aa11.29□□□□□ -0.6
SCFD1-201ENST00000311943 COPS7BQ9H9Q2 264 aaPredicted RBP11.29□□□□□ -0.6
SCFD1-201ENST00000311943 ROPN1Q9HAT0 212 aaPredicted RBP11.29□□□□□ -0.6
SCFD1-201ENST00000311943 PNO1Q9NRX1 252 aaKnown RBP11.29□□□□□ -0.6
SCFD1-201ENST00000311943 ZNF223Q9UK11 482 aaPredicted RBP11.29□□□□□ -0.6
SCFD1-201ENST00000311943 FASNP49327 2511 aaKnown RBP11.28□□□□□ -0.6
SCFD1-201ENST00000311943 NME6O75414 186 aaPredicted RBP11.28□□□□□ -0.6
SCFD1-201ENST00000311943 LYPLA1O75608 230 aaPredicted RBP11.28□□□□□ -0.6
SCFD1-201ENST00000311943 MYO1DO94832 1006 aa11.28□□□□□ -0.6
SCFD1-201ENST00000311943 ZIC2O95409 532 aaPredicted RBP11.28□□□□□ -0.6
SCFD1-201ENST00000311943 OTCP00480 354 aa11.28□□□□□ -0.6
SCFD1-201ENST00000311943 HPP00738 406 aa11.28□□□□□ -0.6
SCFD1-201ENST00000311943 ETV4P43268 484 aa11.28□□□□□ -0.6
SCFD1-201ENST00000311943 RAP1GDS1P52306 607 aa11.28□□□□□ -0.6
SCFD1-201ENST00000311943 RAB38P57729 211 aa11.28□□□□□ -0.6
SCFD1-201ENST00000311943 OR4D2P58180 307 aa11.28□□□□□ -0.6
SCFD1-201ENST00000311943 TBL3Q12788 808 aaKnown RBP11.28□□□□□ -0.6
SCFD1-201ENST00000311943 AIMP2Q13155 320 aaKnown RBP11.28□□□□□ -0.6
SCFD1-201ENST00000311943 AP5B1Q2VPB7 878 aa11.28□□□□□ -0.6
SCFD1-201ENST00000311943 PLEKHN1Q494U1 663 aaPredicted RBP11.28□□□□□ -0.6
SCFD1-201ENST00000311943 FRMD7Q6ZUT3 714 aa11.28□□□□□ -0.6
SCFD1-201ENST00000311943 CHSY3Q70JA7 882 aa11.28□□□□□ -0.6
SCFD1-201ENST00000311943 SCUBE1Q8IWY4 988 aa11.28□□□□□ -0.6
SCFD1-201ENST00000311943 SIMC1Q8NDZ2 872 aa11.28□□□□□ -0.6
SCFD1-201ENST00000311943 PLPP5Q8NEB5 264 aa11.28□□□□□ -0.6
SCFD1-201ENST00000311943 NUDT8Q8WV74 236 aa11.28□□□□□ -0.6
SCFD1-201ENST00000311943 METTL21AQ8WXB1 218 aa11.28□□□□□ -0.6
SCFD1-201ENST00000311943 C19orf60Q96EN9 201 aa11.28□□□□□ -0.6
SCFD1-201ENST00000311943 OR1F2PQ96R84 312 aa11.28□□□□□ -0.6
SCFD1-201ENST00000311943 TMEM109Q9BVC6 243 aa11.28□□□□□ -0.6
SCFD1-201ENST00000311943 EBPLQ9BY08 206 aa11.28□□□□□ -0.6
SCFD1-201ENST00000311943 ELOVL6Q9H5J4 265 aa11.28□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms