RNA–Protein interactions for RNA: ENST00000307859.4

TRIM40-205, Transcript of tripartite motif containing 40, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TRIM40, Length 1,640 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM40-205ENST00000307859 AMER3Q8N944 861 aa11.3□□□□□ -0.6
TRIM40-205ENST00000307859 OR2L5Q8NG80 312 aa11.3□□□□□ -0.6
TRIM40-205ENST00000307859 SEPHS2Q99611 448 aa11.3□□□□□ -0.6
TRIM40-205ENST00000307859 C17orf62Q9BQA9 187 aa11.3□□□□□ -0.6
TRIM40-205ENST00000307859 CHID1Q9BWS9 393 aa11.3□□□□□ -0.6
TRIM40-205ENST00000307859 KLHL31Q9H511 634 aa11.3□□□□□ -0.6
TRIM40-205ENST00000307859 MAGIXQ9H6Y5 334 aa11.3□□□□□ -0.6
TRIM40-205ENST00000307859 COQ10BQ9H8M1 238 aa11.3□□□□□ -0.6
TRIM40-205ENST00000307859 PRDM7Q9NQW5 492 aa11.3□□□□□ -0.6
TRIM40-205ENST00000307859 TAS2R9Q9NYW1 312 aa11.3□□□□□ -0.6
TRIM40-205ENST00000307859 APOBEC3BQ9UH17 382 aaKnown RBP11.3□□□□□ -0.6
TRIM40-205ENST00000307859 FBXO4Q9UKT5 387 aa11.3□□□□□ -0.6
TRIM40-205ENST00000307859 RAB26Q9ULW5 256 aa11.3□□□□□ -0.6
TRIM40-205ENST00000307859 PCDHGB4Q9UN71 923 aa11.3□□□□□ -0.6
TRIM40-205ENST00000307859 KLHL20Q9Y2M5 609 aa11.3□□□□□ -0.6
TRIM40-205ENST00000307859 SIT1Q9Y3P8 196 aa11.3□□□□□ -0.6
TRIM40-205ENST00000307859 ENTPD2Q9Y5L3 495 aa11.3□□□□□ -0.6
TRIM40-205ENST00000307859 V9GYQ6 96 aa11.3□□□□□ -0.6
TRIM40-205ENST00000307859 A0A1W2PRB8 838 aa11.29□□□□□ -0.6
TRIM40-205ENST00000307859 OR6C74A6NCV1 312 aa11.29□□□□□ -0.6
TRIM40-205ENST00000307859 PPM1DO15297 605 aa11.29□□□□□ -0.6
TRIM40-205ENST00000307859 ZW10O43264 779 aa11.29□□□□□ -0.6
TRIM40-205ENST00000307859 PRSS23O95084 383 aa11.29□□□□□ -0.6
TRIM40-205ENST00000307859 LDLRP01130 860 aa11.29□□□□□ -0.6
TRIM40-205ENST00000307859 NME1P15531 152 aaKnown RBP11.29□□□□□ -0.6
TRIM40-205ENST00000307859 JUNDP17535 347 aa11.29□□□□□ -0.6
TRIM40-205ENST00000307859 TGM1P22735 817 aa11.29□□□□□ -0.6
TRIM40-205ENST00000307859 CD38P28907 300 aa11.29□□□□□ -0.6
TRIM40-205ENST00000307859 PLA2G16P53816 162 aa11.29□□□□□ -0.6
TRIM40-205ENST00000307859 RACK1P63244 317 aaKnown RBP11.29□□□□□ -0.6
TRIM40-205ENST00000307859 SHC2P98077 582 aa11.29□□□□□ -0.6
TRIM40-205ENST00000307859 RELAQ04206 551 aa11.29□□□□□ -0.6
TRIM40-205ENST00000307859 CHRNB3Q05901 458 aa11.29□□□□□ -0.6
TRIM40-205ENST00000307859 VEZF1Q14119 521 aa11.29□□□□□ -0.6
TRIM40-205ENST00000307859 RGNQ15493 299 aa11.29□□□□□ -0.6
TRIM40-205ENST00000307859 NKG7Q16617 165 aa11.29□□□□□ -0.6
TRIM40-205ENST00000307859 MRM1Q6IN84 353 aaKnown RBP11.29□□□□□ -0.6
TRIM40-205ENST00000307859 PPP4R4Q6NUP7 873 aa11.29□□□□□ -0.6
TRIM40-205ENST00000307859 ZCCHC8Q6NZY4 707 aaKnown RBP11.29□□□□□ -0.6
TRIM40-205ENST00000307859 ENPP6Q6UWR7 440 aa11.29□□□□□ -0.6
TRIM40-205ENST00000307859 VN1R4Q7Z5H5 301 aa11.29□□□□□ -0.6
TRIM40-205ENST00000307859 TRIM73Q86UV7 250 aa11.29□□□□□ -0.6
TRIM40-205ENST00000307859 SFTPA2Q8IWL1 248 aa11.29□□□□□ -0.6
TRIM40-205ENST00000307859 RBM12BQ8IXT5 1001 aaKnown RBP11.29□□□□□ -0.6
TRIM40-205ENST00000307859 EID3Q8N140 333 aa11.29□□□□□ -0.6
TRIM40-205ENST00000307859 ZCCHC7Q8N3Z6 543 aaKnown RBP11.29□□□□□ -0.6
TRIM40-205ENST00000307859 PACRGLQ8N7B6 248 aa11.29□□□□□ -0.6
TRIM40-205ENST00000307859 TRIML2Q8N7C3 387 aa11.29□□□□□ -0.6
TRIM40-205ENST00000307859 SRFBP1Q8NEF9 429 aaKnown RBP11.29□□□□□ -0.6
TRIM40-205ENST00000307859 FBXO30Q8TB52 745 aa11.29□□□□□ -0.6
TRIM40-205ENST00000307859 NT5CQ8TCD5 201 aa11.29□□□□□ -0.6
TRIM40-205ENST00000307859 NETO1Q8TDF5 533 aa11.29□□□□□ -0.6
TRIM40-205ENST00000307859 NCLNQ969V3 563 aa11.29□□□□□ -0.6
TRIM40-205ENST00000307859 ZNF597Q96LX8 424 aa11.29□□□□□ -0.6
TRIM40-205ENST00000307859 RNF145Q96MT1 663 aa11.29□□□□□ -0.6
TRIM40-205ENST00000307859 KCNC2Q96PR1 638 aa11.29□□□□□ -0.6
TRIM40-205ENST00000307859 NR1H4Q96RI1 486 aaPredicted RBP11.29□□□□□ -0.6
TRIM40-205ENST00000307859 CIB1Q99828 191 aa11.29□□□□□ -0.6
TRIM40-205ENST00000307859 SLC35A5Q9BS91 424 aa11.29□□□□□ -0.6
TRIM40-205ENST00000307859 C8orf4Q9NR00 106 aa11.29□□□□□ -0.6
TRIM40-205ENST00000307859 TEX10Q9NXF1 929 aaPredicted RBP11.29□□□□□ -0.6
TRIM40-205ENST00000307859 TAS2R7Q9NYW3 318 aa11.29□□□□□ -0.6
TRIM40-205ENST00000307859 EHD3Q9NZN3 535 aa11.29□□□□□ -0.6
TRIM40-205ENST00000307859 SCN2AQ99250 2005 aa11.28□□□□□ -0.6
TRIM40-205ENST00000307859 GSAPA4D1B5 854 aa11.28□□□□□ -0.6
TRIM40-205ENST00000307859 FAM149AA5PLN7 773 aa11.28□□□□□ -0.6
TRIM40-205ENST00000307859 C2orf74A8MZ97 194 aa11.28□□□□□ -0.6
TRIM40-205ENST00000307859 MAP3K13O43283 966 aa11.28□□□□□ -0.6
TRIM40-205ENST00000307859 ERI3O43414 337 aaKnown RBP11.28□□□□□ -0.6
TRIM40-205ENST00000307859 DENRO43583 198 aaKnown RBP11.28□□□□□ -0.6
TRIM40-205ENST00000307859 CSF2P04141 144 aa11.28□□□□□ -0.6
TRIM40-205ENST00000307859 DRD2P14416 443 aa11.28□□□□□ -0.6
TRIM40-205ENST00000307859 CKMT2P17540 419 aa11.28□□□□□ -0.6
TRIM40-205ENST00000307859 POLR2CP19387 275 aaPredicted RBP11.28□□□□□ -0.6
TRIM40-205ENST00000307859 MAGP20916 626 aa11.28□□□□□ -0.6
TRIM40-205ENST00000307859 HIST1H1TP22492 207 aaPredicted RBP11.28□□□□□ -0.6
TRIM40-205ENST00000307859 ATP5A1P25705 553 aaKnown RBP11.28□□□□□ -0.6
TRIM40-205ENST00000307859 PCBP4P57723 403 aaKnown RBP11.28□□□□□ -0.6
TRIM40-205ENST00000307859 STXBP1P61764 594 aaKnown RBP11.28□□□□□ -0.6
TRIM40-205ENST00000307859 FOLH1Q04609 750 aa11.28□□□□□ -0.6
TRIM40-205ENST00000307859 SLC5A12Q1EHB4 618 aa11.28□□□□□ -0.6
TRIM40-205ENST00000307859 FCRL6Q6DN72 434 aa11.28□□□□□ -0.6
TRIM40-205ENST00000307859 TRIM40Q6P9F5 258 aa11.28□□□□□ -0.6
TRIM40-205ENST00000307859 TMEM26Q6ZUK4 368 aa11.28□□□□□ -0.6
TRIM40-205ENST00000307859 SPRED1Q7Z699 444 aa11.28□□□□□ -0.6
TRIM40-205ENST00000307859 MAML2Q8IZL2 1156 aaPredicted RBP11.28□□□□□ -0.6
TRIM40-205ENST00000307859 CLEC4FQ8N1N0 589 aa11.28□□□□□ -0.6
TRIM40-205ENST00000307859 GALNT4Q8N4A0 578 aa11.28□□□□□ -0.6
TRIM40-205ENST00000307859 DEFB119Q8N690 84 aa11.28□□□□□ -0.6
TRIM40-205ENST00000307859 OR52N2Q8NGI0 321 aa11.28□□□□□ -0.6
TRIM40-205ENST00000307859 OR10G6Q8NH81 332 aa11.28□□□□□ -0.6
TRIM40-205ENST00000307859 PNPT1Q8TCS8 783 aaKnown RBP11.28□□□□□ -0.6
TRIM40-205ENST00000307859 ZDHHC1Q8WTX9 485 aa11.28□□□□□ -0.6
TRIM40-205ENST00000307859 OR5P2Q8WZ92 322 aa11.28□□□□□ -0.6
TRIM40-205ENST00000307859 GAL3ST3Q96A11 431 aa11.28□□□□□ -0.6
TRIM40-205ENST00000307859 THAP11Q96EK4 314 aa11.28□□□□□ -0.6
TRIM40-205ENST00000307859 SLC47A1Q96FL8 570 aa11.28□□□□□ -0.6
TRIM40-205ENST00000307859 SLC29A1Q99808 456 aa11.28□□□□□ -0.6
TRIM40-205ENST00000307859 ABCG4Q9H172 646 aa11.28□□□□□ -0.6
TRIM40-205ENST00000307859 EPS8L2Q9H6S3 715 aa11.28□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 77.6 ms