RNA–Protein interactions for RNA: ENST00000300933.8

TPM4-201, Transcript of tropomyosin 4, humanhuman

TSL 1 (best) BASIC

Gene TPM4, Length 2,666 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4-201ENST00000300933 NR4A2P43354 598 aa20.95■□□□□ 0.94
TPM4-201ENST00000300933 DGUOKQ16854 277 aa20.95■□□□□ 0.94
TPM4-201ENST00000300933 ADAMTSL4Q6UY14 1074 aa20.95■□□□□ 0.94
TPM4-201ENST00000300933 PAGE2Q7Z2X7 111 aa20.95■□□□□ 0.94
TPM4-201ENST00000300933 EID3Q8N140 333 aa20.95■□□□□ 0.94
TPM4-201ENST00000300933 ANKRD53Q8N9V6 530 aa20.95■□□□□ 0.94
TPM4-201ENST00000300933 VPS37AQ8NEZ2 397 aa20.95■□□□□ 0.94
TPM4-201ENST00000300933 JPH3Q8WXH2 748 aaPredicted RBP20.95■□□□□ 0.94
TPM4-201ENST00000300933 REPS1Q96D71 796 aa20.95■□□□□ 0.94
TPM4-201ENST00000300933 CTRCQ99895 268 aa20.95■□□□□ 0.94
TPM4-201ENST00000300933 NDEL1Q9GZM8 345 aa20.95■□□□□ 0.94
TPM4-201ENST00000300933 IMP3Q9NV31 184 aaKnown RBP20.95■□□□□ 0.94
TPM4-201ENST00000300933 MAP4K5Q9Y4K4 846 aa20.95■□□□□ 0.94
TPM4-201ENST00000300933 MYO10Q9HD67 2058 aa20.95■□□□□ 0.94
TPM4-201ENST00000300933 LOC100130705A0A1B0GUX0 176 aa20.95■□□□□ 0.94
TPM4-201ENST00000300933 OR52A4PA6NMU1 304 aa20.95■□□□□ 0.94
TPM4-201ENST00000300933 PPM1DO15297 605 aa20.95■□□□□ 0.94
TPM4-201ENST00000300933 PI15O43692 258 aa20.95■□□□□ 0.94
TPM4-201ENST00000300933 TBX6O95947 436 aaPredicted RBP20.95■□□□□ 0.94
TPM4-201ENST00000300933 SERPIND1P05546 499 aa20.95■□□□□ 0.94
TPM4-201ENST00000300933 MAPK9P45984 424 aa20.95■□□□□ 0.94
TPM4-201ENST00000300933 SEPHS1P49903 392 aa20.95■□□□□ 0.94
TPM4-201ENST00000300933 IL5RAQ01344 420 aa20.95■□□□□ 0.94
TPM4-201ENST00000300933 RGNQ15493 299 aa20.95■□□□□ 0.94
TPM4-201ENST00000300933 METRNLQ641Q3 311 aa20.95■□□□□ 0.94
TPM4-201ENST00000300933 COQ8BQ96D53 544 aa20.95■□□□□ 0.94
TPM4-201ENST00000300933 REEP4Q9H6H4 257 aa20.95■□□□□ 0.94
TPM4-201ENST00000300933 WDR26Q9H7D7 661 aa20.95■□□□□ 0.94
TPM4-201ENST00000300933 FBXL12Q9NXK8 326 aa20.95■□□□□ 0.94
TPM4-201ENST00000300933 ERVK-18Q9QC07 812 aa20.95■□□□□ 0.94
TPM4-201ENST00000300933 NINQ8N4C6 2090 aa20.95■□□□□ 0.94
TPM4-201ENST00000300933 SLC31A1O15431 190 aa20.94■□□□□ 0.94
TPM4-201ENST00000300933 ISL1P61371 349 aa20.94■□□□□ 0.94
TPM4-201ENST00000300933 PCDH1Q08174 1060 aa20.94■□□□□ 0.94
TPM4-201ENST00000300933 ADCK2Q7Z695 626 aa20.94■□□□□ 0.94
TPM4-201ENST00000300933 OR6Q1Q8NGQ2 317 aa20.94■□□□□ 0.94
TPM4-201ENST00000300933 RORBQ92753 470 aa20.94■□□□□ 0.94
TPM4-201ENST00000300933 EFHD2Q96C19 240 aaPredicted RBP20.94■□□□□ 0.94
TPM4-201ENST00000300933 GABARAPO95166 117 aa20.94■□□□□ 0.94
TPM4-201ENST00000300933 KELP23276 732 aa20.94■□□□□ 0.94
TPM4-201ENST00000300933 FMO3P31513 532 aa20.94■□□□□ 0.94
TPM4-201ENST00000300933 GABARAPL2P60520 117 aa20.94■□□□□ 0.94
TPM4-201ENST00000300933 ZNF33BQ06732 778 aa20.94■□□□□ 0.94
TPM4-201ENST00000300933 SIM2Q14190 667 aaPredicted RBP20.94■□□□□ 0.94
TPM4-201ENST00000300933 E2F2Q14209 437 aa20.94■□□□□ 0.94
TPM4-201ENST00000300933 TMEM31Q5JXX7 168 aa20.94■□□□□ 0.94
TPM4-201ENST00000300933 ATAD3BQ5T9A4 648 aa20.94■□□□□ 0.94
TPM4-201ENST00000300933 CYP4Z1Q86W10 505 aa20.94■□□□□ 0.94
TPM4-201ENST00000300933 DCUN1D3Q8IWE4 304 aa20.94■□□□□ 0.94
TPM4-201ENST00000300933 PUM2Q8TB72 1066 aaKnown RBP eCLIP20.94■□□□□ 0.943e-8■■□□□ 12.4
TPM4-201ENST00000300933 UCN3Q969E3 161 aa20.94■□□□□ 0.94
TPM4-201ENST00000300933 RAB7BQ96AH8 199 aa20.94■□□□□ 0.94
TPM4-201ENST00000300933 PPCDCQ96CD2 204 aa20.94■□□□□ 0.94
TPM4-201ENST00000300933 C12orf66Q96MD2 445 aa20.94■□□□□ 0.94
TPM4-201ENST00000300933 DACH2Q96NX9 599 aa20.94■□□□□ 0.94
TPM4-201ENST00000300933 FERD3LQ96RJ6 166 aa20.94■□□□□ 0.94
TPM4-201ENST00000300933 MIR1-1HGQ9H1L0 117 aa20.94■□□□□ 0.94
TPM4-201ENST00000300933 RSPH9Q9H1X1 276 aaPredicted RBP20.94■□□□□ 0.94
TPM4-201ENST00000300933 SLC28A3Q9HAS3 691 aa20.94■□□□□ 0.94
TPM4-201ENST00000300933 CD93Q9NPY3 652 aa20.94■□□□□ 0.94
TPM4-201ENST00000300933 SAMD4AQ9UPU9 718 aaKnown RBP20.94■□□□□ 0.94
TPM4-201ENST00000300933 AP3M1Q9Y2T2 418 aa20.94■□□□□ 0.94
TPM4-201ENST00000300933 WASHC1A8K0Z3 465 aa20.93■□□□□ 0.94
TPM4-201ENST00000300933 K7EQS6 105 aa20.93■□□□□ 0.94
TPM4-201ENST00000300933 NDUFB5O43674 189 aa20.93■□□□□ 0.94
TPM4-201ENST00000300933 FURINP09958 794 aa20.93■□□□□ 0.94
TPM4-201ENST00000300933 PSMB9P28065 219 aa20.93■□□□□ 0.94
TPM4-201ENST00000300933 ALDH9A1P49189 494 aa20.93■□□□□ 0.94
TPM4-201ENST00000300933 ITPRIPL2Q3MIP1 535 aa20.93■□□□□ 0.94
TPM4-201ENST00000300933 CPZQ66K79 652 aa20.93■□□□□ 0.94
TPM4-201ENST00000300933 WASH2PQ6VEQ5 465 aa20.93■□□□□ 0.94
TPM4-201ENST00000300933 MSANTD1Q6ZTZ1 278 aa20.93■□□□□ 0.94
TPM4-201ENST00000300933 LINC01555Q8NAE3 123 aa20.93■□□□□ 0.94
TPM4-201ENST00000300933 PIK3C3Q8NEB9 887 aa20.93■□□□□ 0.94
TPM4-201ENST00000300933 OR5K2Q8NHB8 316 aa20.93■□□□□ 0.94
TPM4-201ENST00000300933 SLC35A5Q9BS91 424 aa20.93■□□□□ 0.94
TPM4-201ENST00000300933 TMEFF2Q9UIK5 374 aaPredicted RBP20.93■□□□□ 0.94
TPM4-201ENST00000300933 CCDC88CQ9P219 2028 aa20.93■□□□□ 0.94
TPM4-201ENST00000300933 FAM47E-STBD1D6RA91 191 aa20.93■□□□□ 0.94
TPM4-201ENST00000300933 LAMP2P13473 410 aa20.93■□□□□ 0.94
TPM4-201ENST00000300933 SOAT1P35610 550 aa20.93■□□□□ 0.94
TPM4-201ENST00000300933 DMPKQ09013 629 aa20.93■□□□□ 0.94
TPM4-201ENST00000300933 GPR155Q7Z3F1 870 aa20.93■□□□□ 0.94
TPM4-201ENST00000300933 C17orf64Q86WR6 236 aa20.93■□□□□ 0.94
TPM4-201ENST00000300933 FAM129CQ86XR2 697 aa20.93■□□□□ 0.94
TPM4-201ENST00000300933 HOMEZQ8IX15 550 aa20.93■□□□□ 0.94
TPM4-201ENST00000300933 OR52E4Q8NGH9 312 aa20.93■□□□□ 0.94
TPM4-201ENST00000300933 OR5K1Q8NHB7 308 aa20.93■□□□□ 0.94
TPM4-201ENST00000300933 RPL3LQ92901 407 aaKnown RBP20.93■□□□□ 0.94
TPM4-201ENST00000300933 WDR34Q96EX3 536 aa20.93■□□□□ 0.94
TPM4-201ENST00000300933 RHNO1Q9BSD3 238 aa20.93■□□□□ 0.94
TPM4-201ENST00000300933 TRMT61BQ9BVS5 477 aaKnown RBP20.93■□□□□ 0.94
TPM4-201ENST00000300933 IL1RAPQ9NPH3 570 aa20.93■□□□□ 0.94
TPM4-201ENST00000300933 KLHL3Q9UH77 587 aa20.93■□□□□ 0.94
TPM4-201ENST00000300933 SNX8Q9Y5X2 465 aa20.93■□□□□ 0.94
TPM4-201ENST00000300933 FOXE1O00358 373 aaPredicted RBP20.92■□□□□ 0.94
TPM4-201ENST00000300933 SLC22A1O15245 554 aa20.92■□□□□ 0.94
TPM4-201ENST00000300933 GCM2O75603 506 aaPredicted RBP20.92■□□□□ 0.94
TPM4-201ENST00000300933 SLC35G4P0C7Q5 338 aa20.92■□□□□ 0.94
TPM4-201ENST00000300933 OR1E2P47887 323 aa20.92■□□□□ 0.94
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms