RNA–Protein interactions for RNA: ENST00000297071.8

TRA2A-201, Transcript of transformer 2 alpha homolog, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TRA2A, Length 1,845 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRA2A-201ENST00000297071 GLTPD2A6NH11 291 aa18.33■□□□□ 0.53
TRA2A-201ENST00000297071 MANSC4A6NHS7 340 aaPredicted RBP18.33■□□□□ 0.53
TRA2A-201ENST00000297071 GREM1O60565 184 aa18.33■□□□□ 0.53
TRA2A-201ENST00000297071 TPST2O60704 377 aa18.33■□□□□ 0.53
TRA2A-201ENST00000297071 ZNF821O75541 412 aaPredicted RBP18.33■□□□□ 0.53
TRA2A-201ENST00000297071 GAAP10253 952 aa18.33■□□□□ 0.53
TRA2A-201ENST00000297071 PRKCAP17252 672 aa18.33■□□□□ 0.53
TRA2A-201ENST00000297071 SNRPD1P62314 119 aaKnown RBP18.33■□□□□ 0.53
TRA2A-201ENST00000297071 ALDH6A1Q02252 535 aaKnown RBP18.33■□□□□ 0.53
TRA2A-201ENST00000297071 BAK1Q16611 211 aa18.33■□□□□ 0.53
TRA2A-201ENST00000297071 COX20Q5RI15 118 aa18.33■□□□□ 0.53
TRA2A-201ENST00000297071 SLC35F1Q5T1Q4 408 aa18.33■□□□□ 0.53
TRA2A-201ENST00000297071 RNF175Q8N4F7 328 aa18.33■□□□□ 0.53
TRA2A-201ENST00000297071 OR52J3Q8NH60 311 aa18.33■□□□□ 0.53
TRA2A-201ENST00000297071 ATG10Q9H0Y0 220 aa18.33■□□□□ 0.53
TRA2A-201ENST00000297071 ABCG8Q9H221 673 aa18.33■□□□□ 0.53
TRA2A-201ENST00000297071 MYNNQ9NPC7 610 aa18.33■□□□□ 0.53
TRA2A-201ENST00000297071 TAS2R16Q9NYV7 291 aa18.33■□□□□ 0.53
TRA2A-201ENST00000297071 NFKBIL1Q9UBC1 381 aaPredicted RBP18.33■□□□□ 0.53
TRA2A-201ENST00000297071 REV1Q9UBZ9 1251 aa18.33■□□□□ 0.53
TRA2A-201ENST00000297071 A0A1W2PQ09 198 aa18.33■□□□□ 0.52
TRA2A-201ENST00000297071 CCDC182A6NF36 153 aa18.33■□□□□ 0.52
TRA2A-201ENST00000297071 E7EQ34 232 aa18.33■□□□□ 0.52
TRA2A-201ENST00000297071 EFEMP2O95967 443 aa18.33■□□□□ 0.52
TRA2A-201ENST00000297071 MYCP01106 439 aaPredicted RBP18.33■□□□□ 0.52
TRA2A-201ENST00000297071 HLA-DQB1P01920 261 aa18.33■□□□□ 0.52
TRA2A-201ENST00000297071 IFNW1P05000 195 aa18.33■□□□□ 0.52
TRA2A-201ENST00000297071 ZNF8P17098 575 aaPredicted RBP18.33■□□□□ 0.52
TRA2A-201ENST00000297071 ERP29P30040 261 aaKnown RBP18.33■□□□□ 0.52
TRA2A-201ENST00000297071 IRS1P35568 1242 aa18.33■□□□□ 0.52
TRA2A-201ENST00000297071 SPINT3P49223 89 aa18.33■□□□□ 0.52
TRA2A-201ENST00000297071 HBA1P69905 142 aa18.33■□□□□ 0.52
TRA2A-201ENST00000297071 C1DQ13901 141 aaKnown RBP18.33■□□□□ 0.52
TRA2A-201ENST00000297071 MFSD4BQ5TF39 518 aa18.33■□□□□ 0.52
TRA2A-201ENST00000297071 RGMBQ6NW40 437 aa18.33■□□□□ 0.52
TRA2A-201ENST00000297071 GATAD2AQ86YP4 633 aa18.33■□□□□ 0.52
TRA2A-201ENST00000297071 PEX5LQ8IYB4 626 aa18.33■□□□□ 0.52
TRA2A-201ENST00000297071 OR7G3Q8NG95 312 aa18.33■□□□□ 0.52
TRA2A-201ENST00000297071 APOBEC4Q8WW27 367 aaKnown RBP18.33■□□□□ 0.52
TRA2A-201ENST00000297071 VOPP1Q96AW1 172 aa18.33■□□□□ 0.52
TRA2A-201ENST00000297071 TIFAQ96CG3 184 aa18.33■□□□□ 0.52
TRA2A-201ENST00000297071 MTERF1Q99551 399 aaKnown RBP18.33■□□□□ 0.52
TRA2A-201ENST00000297071 UCK2Q9BZX2 261 aa18.33■□□□□ 0.52
TRA2A-201ENST00000297071 RC3H2Q9HBD1 1191 aaKnown RBP18.33■□□□□ 0.52
TRA2A-201ENST00000297071 ACOXLQ9NUZ1 547 aa18.33■□□□□ 0.52
TRA2A-201ENST00000297071 GULP1Q9UBP9 304 aa18.33■□□□□ 0.52
TRA2A-201ENST00000297071 TMPRSS11EQ9UL52 423 aa18.33■□□□□ 0.52
TRA2A-201ENST00000297071 PRAMEF33A0A0G2JMD5 474 aa18.32■□□□□ 0.52
TRA2A-201ENST00000297071 STK25O00506 426 aa18.32■□□□□ 0.52
TRA2A-201ENST00000297071 PRAMEF10O60809 474 aa18.32■□□□□ 0.52
TRA2A-201ENST00000297071 ENTPD6O75354 484 aa18.32■□□□□ 0.52
TRA2A-201ENST00000297071 GASTP01350 101 aa18.32■□□□□ 0.52
TRA2A-201ENST00000297071 OPN1SWP03999 348 aa18.32■□□□□ 0.52
TRA2A-201ENST00000297071 RB1P06400 928 aa18.32■□□□□ 0.52
TRA2A-201ENST00000297071 FURINP09958 794 aa18.32■□□□□ 0.52
TRA2A-201ENST00000297071 DCDC1P59894 354 aa18.32■□□□□ 0.52
TRA2A-201ENST00000297071 ZNF385BQ569K4 471 aa18.32■□□□□ 0.52
TRA2A-201ENST00000297071 METAP1DQ6UB28 335 aaPredicted RBP18.32■□□□□ 0.52
TRA2A-201ENST00000297071 PLCZ1Q86YW0 608 aa18.32■□□□□ 0.52
TRA2A-201ENST00000297071 APCDD1Q8J025 514 aa18.32■□□□□ 0.52
TRA2A-201ENST00000297071 CPXM2Q8N436 756 aa18.32■□□□□ 0.52
TRA2A-201ENST00000297071 OR8J1Q8NGP2 316 aa18.32■□□□□ 0.52
TRA2A-201ENST00000297071 CDC26Q8NHZ8 85 aa18.32■□□□□ 0.52
TRA2A-201ENST00000297071 WFDC5Q8TCV5 224 aa18.32■□□□□ 0.52
TRA2A-201ENST00000297071 SKA2Q8WVK7 121 aaPredicted RBP18.32■□□□□ 0.52
TRA2A-201ENST00000297071 MRPL9Q9BYD2 267 aaKnown RBP18.32■□□□□ 0.52
TRA2A-201ENST00000297071 NIPAL2Q9H841 368 aa18.32■□□□□ 0.52
TRA2A-201ENST00000297071 DIABLOQ9NR28 239 aa18.32■□□□□ 0.52
TRA2A-201ENST00000297071 STOX2Q9P2F5 926 aaPredicted RBP18.32■□□□□ 0.52
TRA2A-201ENST00000297071 NUP210Q8TEM1 1887 aaPredicted RBP18.31■□□□□ 0.52
TRA2A-201ENST00000297071 THSD7BQ9C0I4 1608 aa18.31■□□□□ 0.52
TRA2A-201ENST00000297071 TRBC2A0A5B9 178 aa18.31■□□□□ 0.52
TRA2A-201ENST00000297071 IRGMA1A4Y4 181 aa18.31■□□□□ 0.52
TRA2A-201ENST00000297071 FAAHO00519 579 aa18.31■□□□□ 0.52
TRA2A-201ENST00000297071 AP3D1O14617 1153 aa18.31■□□□□ 0.52
TRA2A-201ENST00000297071 RGS5O15539 181 aa18.31■□□□□ 0.52
TRA2A-201ENST00000297071 HOXA2O43364 376 aa18.31■□□□□ 0.52
TRA2A-201ENST00000297071 HCN1O60741 890 aa18.31■□□□□ 0.52
TRA2A-201ENST00000297071 ETHE1O95571 254 aa18.31■□□□□ 0.52
TRA2A-201ENST00000297071 GALTP07902 379 aa18.31■□□□□ 0.52
TRA2A-201ENST00000297071 CPEP16870 476 aa18.31■□□□□ 0.52
TRA2A-201ENST00000297071 TNFRSF1BP20333 461 aa18.31■□□□□ 0.52
TRA2A-201ENST00000297071 CPN2P22792 545 aa18.31■□□□□ 0.52
TRA2A-201ENST00000297071 OR1E2P47887 323 aa18.31■□□□□ 0.52
TRA2A-201ENST00000297071 AGTRAPQ6RW13 159 aa18.31■□□□□ 0.52
TRA2A-201ENST00000297071 ZNF438Q7Z4V0 828 aa18.31■□□□□ 0.52
TRA2A-201ENST00000297071 DNAJB7Q7Z6W7 309 aaPredicted RBP18.31■□□□□ 0.52
TRA2A-201ENST00000297071 PHF6Q8IWS0 365 aaKnown RBP eCLIP18.31■□□□□ 0.52
TRA2A-201ENST00000297071 NATD1Q8N6N6 113 aa18.31■□□□□ 0.52
TRA2A-201ENST00000297071 FBXO15Q8NCQ5 510 aaPredicted RBP18.31■□□□□ 0.52
TRA2A-201ENST00000297071 OR6K2Q8NGY2 324 aa18.31■□□□□ 0.52
TRA2A-201ENST00000297071 CREB3L4Q8TEY5 395 aa18.31■□□□□ 0.52
TRA2A-201ENST00000297071 GTPBP3Q969Y2 492 aaKnown RBP18.31■□□□□ 0.52
TRA2A-201ENST00000297071 FRMD6Q96NE9 622 aa18.31■□□□□ 0.52
TRA2A-201ENST00000297071 SUV39H2Q9H5I1 410 aa18.31■□□□□ 0.52
TRA2A-201ENST00000297071 BRD9Q9H8M2 597 aa18.31■□□□□ 0.52
TRA2A-201ENST00000297071 RNF121Q9H920 327 aa18.31■□□□□ 0.52
TRA2A-201ENST00000297071 EXOSC4Q9NPD3 245 aaKnown RBP18.31■□□□□ 0.52
TRA2A-201ENST00000297071 DKK3Q9UBP4 350 aa18.31■□□□□ 0.52
TRA2A-201ENST00000297071 ICKQ9UPZ9 632 aa18.31■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 122 ms