RNA–Protein interactions for RNA: ENST00000289547.8

NPC1L1-201, Transcript of NPC1 like intracellular cholesterol transporter 1, humanhuman

TSL 1 (best) BASIC

Gene NPC1L1, Length 5,048 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPC1L1-201ENST00000289547 ZNHIT3Q15649 155 aaPredicted RBP10.95□□□□□ -0.66
NPC1L1-201ENST00000289547 RAB12Q6IQ22 244 aa10.95□□□□□ -0.66
NPC1L1-201ENST00000289547 PNCKQ6P2M8 343 aa10.95□□□□□ -0.66
NPC1L1-201ENST00000289547 ZNF615Q8N8J6 731 aa10.95□□□□□ -0.66
NPC1L1-201ENST00000289547 TFAP2CQ92754 450 aa10.95□□□□□ -0.66
NPC1L1-201ENST00000289547 ZNF689Q96CS4 500 aaPredicted RBP10.95□□□□□ -0.66
NPC1L1-201ENST00000289547 ENAMQ9NRM1 1142 aa10.95□□□□□ -0.66
NPC1L1-201ENST00000289547 POFUT2Q9Y2G5 429 aa10.95□□□□□ -0.66
NPC1L1-201ENST00000289547 IQCF5A8MTL0 148 aa10.95□□□□□ -0.66
NPC1L1-201ENST00000289547 AGXTP21549 392 aa10.95□□□□□ -0.66
NPC1L1-201ENST00000289547 TARDBPQ13148 414 aaKnown RBP eCLIP10.95□□□□□ -0.66
NPC1L1-201ENST00000289547 SYNPOQ8N3V7 929 aa10.95□□□□□ -0.66
NPC1L1-201ENST00000289547 KCNA7Q96RP8 456 aa10.95□□□□□ -0.66
NPC1L1-201ENST00000289547 RANBP3Q9H6Z4 567 aaPredicted RBP10.95□□□□□ -0.66
NPC1L1-201ENST00000289547 SLC39A1Q9NY26 324 aa10.95□□□□□ -0.66
NPC1L1-201ENST00000289547 ZNF69Q9UC07 566 aa10.95□□□□□ -0.66
NPC1L1-201ENST00000289547 CLIC1O00299 241 aa10.94□□□□□ -0.66
NPC1L1-201ENST00000289547 KHNYNO15037 678 aaKnown RBP10.94□□□□□ -0.66
NPC1L1-201ENST00000289547 CER1O95813 267 aa10.94□□□□□ -0.66
NPC1L1-201ENST00000289547 OPN1SWP03999 348 aa10.94□□□□□ -0.66
NPC1L1-201ENST00000289547 IFNA6P05013 189 aa10.94□□□□□ -0.66
NPC1L1-201ENST00000289547 IL32P24001 234 aa10.94□□□□□ -0.66
NPC1L1-201ENST00000289547 EIF2DP41214 584 aaKnown RBP10.94□□□□□ -0.66
NPC1L1-201ENST00000289547 ASMTP46597 345 aa10.94□□□□□ -0.66
NPC1L1-201ENST00000289547 CASP9P55211 416 aa10.94□□□□□ -0.66
NPC1L1-201ENST00000289547 CD47Q08722 323 aa10.94□□□□□ -0.66
NPC1L1-201ENST00000289547 HNRNPA1L2Q32P51 320 aaKnown RBP10.94□□□□□ -0.66
NPC1L1-201ENST00000289547 SIRPB2Q5JXA9 342 aa10.94□□□□□ -0.66
NPC1L1-201ENST00000289547 FOXB2Q5VYV0 432 aa10.94□□□□□ -0.66
NPC1L1-201ENST00000289547 NDNFQ8TB73 568 aa10.94□□□□□ -0.66
NPC1L1-201ENST00000289547 MAELQ96JY0 434 aaKnown RBP10.94□□□□□ -0.66
NPC1L1-201ENST00000289547 HYLS1Q96M11 299 aa10.94□□□□□ -0.66
NPC1L1-201ENST00000289547 OR2M4Q96R27 311 aa10.94□□□□□ -0.66
NPC1L1-201ENST00000289547 ABI3Q9P2A4 366 aa10.94□□□□□ -0.66
NPC1L1-201ENST00000289547 SEC14L4Q9UDX3 406 aa10.94□□□□□ -0.66
NPC1L1-201ENST00000289547 TLR4O00206 839 aa10.94□□□□□ -0.66
NPC1L1-201ENST00000289547 DCLK1O15075 740 aa10.94□□□□□ -0.66
NPC1L1-201ENST00000289547 CLDN7O95471 211 aa10.94□□□□□ -0.66
NPC1L1-201ENST00000289547 COMMD7Q86VX2 200 aa10.94□□□□□ -0.66
NPC1L1-201ENST00000289547 APCDD1Q8J025 514 aa10.94□□□□□ -0.66
NPC1L1-201ENST00000289547 PPP1R14AQ96A00 147 aa10.94□□□□□ -0.66
NPC1L1-201ENST00000289547 TFB2MQ9H5Q4 396 aaKnown RBP10.94□□□□□ -0.66
NPC1L1-201ENST00000289547 OR51F1A6NGY5 319 aa10.94□□□□□ -0.66
NPC1L1-201ENST00000289547 C9J4A7 227 aa10.94□□□□□ -0.66
NPC1L1-201ENST00000289547 OR10H2O60403 315 aa10.94□□□□□ -0.66
NPC1L1-201ENST00000289547 NPR2P20594 1047 aa10.94□□□□□ -0.66
NPC1L1-201ENST00000289547 PNLIPRP1P54315 467 aa10.94□□□□□ -0.66
NPC1L1-201ENST00000289547 SPATS1Q496A3 300 aa10.94□□□□□ -0.66
NPC1L1-201ENST00000289547 AGAP6Q5VW22 663 aa10.94□□□□□ -0.66
NPC1L1-201ENST00000289547 PAQR3Q6TCH7 311 aa10.94□□□□□ -0.66
NPC1L1-201ENST00000289547 OR6C4Q8NGE1 309 aa10.94□□□□□ -0.66
NPC1L1-201ENST00000289547 OR5H6Q8NGV6 325 aa10.94□□□□□ -0.66
NPC1L1-201ENST00000289547 TBC1D15Q8TC07 691 aa10.94□□□□□ -0.66
NPC1L1-201ENST00000289547 CREB3L1Q96BA8 519 aa10.94□□□□□ -0.66
NPC1L1-201ENST00000289547 AGAP4Q96P64 663 aa10.94□□□□□ -0.66
NPC1L1-201ENST00000289547 QPCTLQ9NXS2 382 aa10.94□□□□□ -0.66
NPC1L1-201ENST00000289547 ALG5Q9Y673 324 aa10.94□□□□□ -0.66
NPC1L1-201ENST00000289547 SLC35G6P0C7Q6 338 aa10.94□□□□□ -0.66
NPC1L1-201ENST00000289547 CD6P30203 668 aa10.94□□□□□ -0.66
NPC1L1-201ENST00000289547 HOXC8P31273 242 aa10.94□□□□□ -0.66
NPC1L1-201ENST00000289547 MAGEA12P43365 314 aa10.94□□□□□ -0.66
NPC1L1-201ENST00000289547 AVPR1BP47901 424 aa10.94□□□□□ -0.66
NPC1L1-201ENST00000289547 GABARAPL2P60520 117 aa10.94□□□□□ -0.66
NPC1L1-201ENST00000289547 HYAL1Q12794 435 aa10.94□□□□□ -0.66
NPC1L1-201ENST00000289547 RAPSNQ13702 412 aa10.94□□□□□ -0.66
NPC1L1-201ENST00000289547 GAREM2Q75VX8 874 aa10.94□□□□□ -0.66
NPC1L1-201ENST00000289547 GALNT11Q8NCW6 608 aa10.94□□□□□ -0.66
NPC1L1-201ENST00000289547 S100PBPQ96BU1 408 aa10.94□□□□□ -0.66
NPC1L1-201ENST00000289547 ASB16Q96NS5 453 aa10.94□□□□□ -0.66
NPC1L1-201ENST00000289547 BHLHE41Q9C0J9 482 aaPredicted RBP10.94□□□□□ -0.66
NPC1L1-201ENST00000289547 TAS2R3Q9NYW6 316 aa10.94□□□□□ -0.66
NPC1L1-201ENST00000289547 NLKQ9UBE8 527 aa10.94□□□□□ -0.66
NPC1L1-201ENST00000289547 CYTH4Q9UIA0 394 aa10.94□□□□□ -0.66
NPC1L1-201ENST00000289547 SLCO3A1Q9UIG8 710 aa10.94□□□□□ -0.66
NPC1L1-201ENST00000289547 RIMS3Q9UJD0 308 aa10.94□□□□□ -0.66
NPC1L1-201ENST00000289547 ARL5AQ9Y689 179 aa10.94□□□□□ -0.66
NPC1L1-201ENST00000289547 DISC1C4P0D8 188 aa10.93□□□□□ -0.66
NPC1L1-201ENST00000289547 PRAMEF26H0Y7S4 382 aa10.93□□□□□ -0.66
NPC1L1-201ENST00000289547 FFAR2O15552 330 aa10.93□□□□□ -0.66
NPC1L1-201ENST00000289547 DFNA5O60443 496 aa10.93□□□□□ -0.66
NPC1L1-201ENST00000289547 PAK4O96013 591 aaPredicted RBP10.93□□□□□ -0.66
NPC1L1-201ENST00000289547 G6PDP11413 515 aa10.93□□□□□ -0.66
NPC1L1-201ENST00000289547 ATP1B2P14415 290 aaPredicted RBP10.93□□□□□ -0.66
NPC1L1-201ENST00000289547 C2orf80Q0P641 193 aa10.93□□□□□ -0.66
NPC1L1-201ENST00000289547 C4orf46Q504U0 113 aa10.93□□□□□ -0.66
NPC1L1-201ENST00000289547 Q8N402 240 aa10.93□□□□□ -0.66
NPC1L1-201ENST00000289547 DNAJB8Q8NHS0 232 aa10.93□□□□□ -0.66
NPC1L1-201ENST00000289547 SORCS1Q8WY21 1168 aa10.93□□□□□ -0.66
NPC1L1-201ENST00000289547 TSNAXQ99598 290 aaKnown RBP10.93□□□□□ -0.66
NPC1L1-201ENST00000289547 ATG10Q9H0Y0 220 aa10.93□□□□□ -0.66
NPC1L1-201ENST00000289547 KCNK12Q9HB15 430 aa10.93□□□□□ -0.66
NPC1L1-201ENST00000289547 GRID2O43424 1007 aa10.93□□□□□ -0.66
NPC1L1-201ENST00000289547 JMJD7P0C870 316 aa10.93□□□□□ -0.66
NPC1L1-201ENST00000289547 HNRNPA2B1P22626 353 aaKnown RBP10.93□□□□□ -0.66
NPC1L1-201ENST00000289547 S100A2P29034 98 aa10.93□□□□□ -0.66
NPC1L1-201ENST00000289547 HNMTP50135 292 aa10.93□□□□□ -0.66
NPC1L1-201ENST00000289547 XKP51811 444 aa10.93□□□□□ -0.66
NPC1L1-201ENST00000289547 SRSF11Q05519 484 aaKnown RBP10.93□□□□□ -0.66
NPC1L1-201ENST00000289547 HEPACAMQ14CZ8 416 aa10.93□□□□□ -0.66
NPC1L1-201ENST00000289547 ZMYND11Q15326 602 aa10.93□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms