RNA–Protein interactions for RNA: ENST00000288723.8

RAB28-201, Transcript of RAB28, member RAS oncogene family, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene RAB28, Length 1,810 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB28-201ENST00000288723 M1APQ8TC57 530 aa19.2■□□□□ 0.66
RAB28-201ENST00000288723 EPS8L3Q8TE67 593 aaKnown RBP19.2■□□□□ 0.66
RAB28-201ENST00000288723 MAPKAP1Q9BPZ7 522 aa19.2■□□□□ 0.66
RAB28-201ENST00000288723 PRTFDC1Q9NRG1 225 aa19.2■□□□□ 0.66
RAB28-201ENST00000288723 STMN3Q9NZ72 180 aa19.2■□□□□ 0.66
RAB28-201ENST00000288723 KCMF1Q9P0J7 381 aa19.2■□□□□ 0.66
RAB28-201ENST00000288723 ADGRE2Q9UHX3 823 aa19.2■□□□□ 0.66
RAB28-201ENST00000288723 RPS17P08708 135 aaKnown RBP19.19■□□□□ 0.66
RAB28-201ENST00000288723 HIST1H1TP22492 207 aaPredicted RBP19.19■□□□□ 0.66
RAB28-201ENST00000288723 SSR2P43308 183 aa19.19■□□□□ 0.66
RAB28-201ENST00000288723 AP2B1P63010 937 aa19.19■□□□□ 0.66
RAB28-201ENST00000288723 TRAF3Q13114 568 aa19.19■□□□□ 0.66
RAB28-201ENST00000288723 SCUBE1Q8IWY4 988 aa19.19■□□□□ 0.66
RAB28-201ENST00000288723 KIF2BQ8N4N8 673 aa19.19■□□□□ 0.66
RAB28-201ENST00000288723 WDR20Q8TBZ3 569 aa19.19■□□□□ 0.66
RAB28-201ENST00000288723 CLDN16Q9Y5I7 305 aa19.19■□□□□ 0.66
RAB28-201ENST00000288723 FLNCQ14315 2725 aa19.19■□□□□ 0.66
RAB28-201ENST00000288723 DYTNA2CJ06 578 aa19.18■□□□□ 0.66
RAB28-201ENST00000288723 PLPP1O14494 284 aa19.18■□□□□ 0.66
RAB28-201ENST00000288723 DLX3O60479 287 aa19.18■□□□□ 0.66
RAB28-201ENST00000288723 ETHE1O95571 254 aa19.18■□□□□ 0.66
RAB28-201ENST00000288723 WDPCPO95876 746 aa19.18■□□□□ 0.66
RAB28-201ENST00000288723 HSD17B3P37058 310 aa19.18■□□□□ 0.66
RAB28-201ENST00000288723 RAP1GDS1P52306 607 aa19.18■□□□□ 0.66
RAB28-201ENST00000288723 ABHD17BQ5VST6 288 aa19.18■□□□□ 0.66
RAB28-201ENST00000288723 OR4C11Q6IEV9 310 aa19.18■□□□□ 0.66
RAB28-201ENST00000288723 ARMC2Q8NEN0 867 aa19.18■□□□□ 0.66
RAB28-201ENST00000288723 ACMSDQ8TDX5 336 aa19.18■□□□□ 0.66
RAB28-201ENST00000288723 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP19.18■□□□□ 0.665e-8■■■■■ 65.3
RAB28-201ENST00000288723 REPS1Q96D71 796 aa19.18■□□□□ 0.66
RAB28-201ENST00000288723 NTMT1Q9BV86 223 aa19.18■□□□□ 0.66
RAB28-201ENST00000288723 ROGDIQ9GZN7 287 aa19.18■□□□□ 0.66
RAB28-201ENST00000288723 MMP25Q9NPA2 562 aa19.18■□□□□ 0.66
RAB28-201ENST00000288723 PNO1Q9NRX1 252 aaKnown RBP19.18■□□□□ 0.66
RAB28-201ENST00000288723 ASF1BQ9NVP2 202 aa19.18■□□□□ 0.66
RAB28-201ENST00000288723 FBXW2Q9UKT8 454 aa19.18■□□□□ 0.66
RAB28-201ENST00000288723 MMACHCQ9Y4U1 282 aa19.18■□□□□ 0.66
RAB28-201ENST00000288723 PCDHGA10Q9Y5H3 936 aa19.18■□□□□ 0.66
RAB28-201ENST00000288723 CLDN4O14493 209 aa19.18■□□□□ 0.66
RAB28-201ENST00000288723 MAN1A2O60476 641 aa19.18■□□□□ 0.66
RAB28-201ENST00000288723 SLU7O95391 586 aaKnown RBP19.18■□□□□ 0.66
RAB28-201ENST00000288723 UQCRFS1P47985 274 aa19.18■□□□□ 0.66
RAB28-201ENST00000288723 HSD17B7P56937 341 aa19.18■□□□□ 0.66
RAB28-201ENST00000288723 ZNF169Q14929 603 aaPredicted RBP19.18■□□□□ 0.66
RAB28-201ENST00000288723 TLR1Q15399 786 aa19.18■□□□□ 0.66
RAB28-201ENST00000288723 OR4F6Q8NGB9 312 aa19.18■□□□□ 0.66
RAB28-201ENST00000288723 OR1N1Q8NGS0 311 aa19.18■□□□□ 0.66
RAB28-201ENST00000288723 OR2W6PQ8NHA6 318 aa19.18■□□□□ 0.66
RAB28-201ENST00000288723 ZNF483Q8TF39 744 aaPredicted RBP19.18■□□□□ 0.66
RAB28-201ENST00000288723 RGMAQ96B86 450 aa19.18■□□□□ 0.66
RAB28-201ENST00000288723 NPAS2Q99743 824 aa19.18■□□□□ 0.66
RAB28-201ENST00000288723 MRPS33Q9Y291 106 aaKnown RBP19.18■□□□□ 0.66
RAB28-201ENST00000288723 NTNG1Q9Y2I2 539 aa19.18■□□□□ 0.66
RAB28-201ENST00000288723 TSC22D4Q9Y3Q8 395 aa19.18■□□□□ 0.66
RAB28-201ENST00000288723 ESPNB1AK53 854 aa19.17■□□□□ 0.66
RAB28-201ENST00000288723 VPS4BO75351 444 aa19.17■□□□□ 0.66
RAB28-201ENST00000288723 TAC1P20366 129 aa19.17■□□□□ 0.66
RAB28-201ENST00000288723 PTX3P26022 381 aaPredicted RBP19.17■□□□□ 0.66
RAB28-201ENST00000288723 SLAMF1Q13291 335 aa19.17■□□□□ 0.66
RAB28-201ENST00000288723 H3F3CQ6NXT2 135 aa19.17■□□□□ 0.66
RAB28-201ENST00000288723 MILR1Q7Z6M3 343 aa19.17■□□□□ 0.66
RAB28-201ENST00000288723 ZNF595Q8IYB9 648 aa19.17■□□□□ 0.66
RAB28-201ENST00000288723 ADAMTS18Q8TE60 1221 aa19.17■□□□□ 0.66
RAB28-201ENST00000288723 TRPC4APQ8TEL6 797 aa19.17■□□□□ 0.66
RAB28-201ENST00000288723 HAS2Q92819 552 aa19.17■□□□□ 0.66
RAB28-201ENST00000288723 LYRM4Q9HD34 91 aa19.17■□□□□ 0.66
RAB28-201ENST00000288723 VPS4AQ9UN37 437 aa19.17■□□□□ 0.66
RAB28-201ENST00000288723 SAGE2PA6NJ88 616 aa19.16■□□□□ 0.66
RAB28-201ENST00000288723 MYO1DO94832 1006 aa19.16■□□□□ 0.66
RAB28-201ENST00000288723 SCELO95171 688 aa19.16■□□□□ 0.66
RAB28-201ENST00000288723 KRT15P19012 456 aa19.16■□□□□ 0.66
RAB28-201ENST00000288723 HERVK_113P63132 956 aa19.16■□□□□ 0.66
RAB28-201ENST00000288723 PHEXP78562 749 aa19.16■□□□□ 0.66
RAB28-201ENST00000288723 SGO1Q5FBB7 561 aa19.16■□□□□ 0.66
RAB28-201ENST00000288723 ACER2Q5QJU3 275 aa19.16■□□□□ 0.66
RAB28-201ENST00000288723 TTC19Q6DKK2 380 aaPredicted RBP19.16■□□□□ 0.66
RAB28-201ENST00000288723 LCA5Q86VQ0 697 aa19.16■□□□□ 0.66
RAB28-201ENST00000288723 ATCAYQ86WG3 371 aa19.16■□□□□ 0.66
RAB28-201ENST00000288723 CRLF3Q8IUI8 442 aa19.16■□□□□ 0.66
RAB28-201ENST00000288723 BEST3Q8N1M1 668 aa19.16■□□□□ 0.66
RAB28-201ENST00000288723 NFAM1Q8NET5 270 aaPredicted RBP19.16■□□□□ 0.66
RAB28-201ENST00000288723 ELP5Q8TE02 316 aa19.16■□□□□ 0.66
RAB28-201ENST00000288723 TMEM237Q96Q45 408 aa19.16■□□□□ 0.66
RAB28-201ENST00000288723 ERVK-6Q9BXR3 956 aa19.16■□□□□ 0.66
RAB28-201ENST00000288723 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP19.16■□□□□ 0.66
RAB28-201ENST00000288723 TEKT2Q9UIF3 430 aa19.16■□□□□ 0.66
RAB28-201ENST00000288723 COPG1Q9Y678 874 aaKnown RBP19.16■□□□□ 0.66
RAB28-201ENST00000288723 TCP11X1B4DZS4 312 aa19.16■□□□□ 0.66
RAB28-201ENST00000288723 LDB3O75112 727 aa19.16■□□□□ 0.66
RAB28-201ENST00000288723 EEDO75530 441 aaKnown RBP19.16■□□□□ 0.66
RAB28-201ENST00000288723 SUPT7LO94864 414 aa19.16■□□□□ 0.66
RAB28-201ENST00000288723 GNLYP22749 145 aa19.16■□□□□ 0.66
RAB28-201ENST00000288723 CPN2P22792 545 aa19.16■□□□□ 0.66
RAB28-201ENST00000288723 TNFSF10P50591 281 aa19.16■□□□□ 0.66
RAB28-201ENST00000288723 ID2Q02363 134 aa19.16■□□□□ 0.66
RAB28-201ENST00000288723 UNC50Q53HI1 259 aa19.16■□□□□ 0.66
RAB28-201ENST00000288723 ZNF678Q5SXM1 525 aa19.16■□□□□ 0.66
RAB28-201ENST00000288723 FRG2Q64ET8 278 aa19.16■□□□□ 0.66
RAB28-201ENST00000288723 LETMD1Q6P1Q0 360 aa19.16■□□□□ 0.66
RAB28-201ENST00000288723 SH2D5Q6ZV89 423 aa19.16■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms