RNA–Protein interactions for RNA: ENST00000275954.3

TMEM47-201, Transcript of transmembrane protein 47, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TMEM47, Length 4,054 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM47-201ENST00000275954 NAA50Q9GZZ1 169 aaKnown RBP13.75□□□□□ -0.21
TMEM47-201ENST00000275954 CNOT11Q9UKZ1 510 aaKnown RBP13.75□□□□□ -0.21
TMEM47-201ENST00000275954 INTS6Q9UL03 887 aaKnown RBP13.75□□□□□ -0.21
TMEM47-201ENST00000275954 CKMT1AP12532 417 aa13.75□□□□□ -0.21
TMEM47-201ENST00000275954 MLLT10P55197 1068 aa13.75□□□□□ -0.21
TMEM47-201ENST00000275954 STXBP1P61764 594 aaKnown RBP13.75□□□□□ -0.21
TMEM47-201ENST00000275954 DLX2Q07687 328 aaPredicted RBP13.75□□□□□ -0.21
TMEM47-201ENST00000275954 EXOC3L2Q2M3D2 409 aa13.75□□□□□ -0.21
TMEM47-201ENST00000275954 SIX5Q8N196 739 aa13.75□□□□□ -0.21
TMEM47-201ENST00000275954 DIRAS2Q96HU8 199 aa13.75□□□□□ -0.21
TMEM47-201ENST00000275954 DOHHQ9BU89 302 aa13.75□□□□□ -0.21
TMEM47-201ENST00000275954 NTMT1Q9BV86 223 aa13.75□□□□□ -0.21
TMEM47-201ENST00000275954 LMAN2LQ9H0V9 348 aa13.75□□□□□ -0.21
TMEM47-201ENST00000275954 PDFQ9HBH1 243 aa13.75□□□□□ -0.21
TMEM47-201ENST00000275954 CAB39Q9Y376 341 aaPredicted RBP13.75□□□□□ -0.21
TMEM47-201ENST00000275954 PCDHA9Q9Y5H5 950 aa13.75□□□□□ -0.21
TMEM47-201ENST00000275954 SPIN1Q9Y657 262 aaPredicted RBP13.75□□□□□ -0.21
TMEM47-201ENST00000275954 DOCK6Q96HP0 2047 aa13.74□□□□□ -0.21
TMEM47-201ENST00000275954 OR52A4PA6NMU1 304 aa13.74□□□□□ -0.21
TMEM47-201ENST00000275954 SLC1A7O00341 560 aa13.74□□□□□ -0.21
TMEM47-201ENST00000275954 MAGEB3O15480 346 aa13.74□□□□□ -0.21
TMEM47-201ENST00000275954 ABLIM3O94929 683 aa13.74□□□□□ -0.21
TMEM47-201ENST00000275954 HLA-DQA2P01906 255 aa13.74□□□□□ -0.21
TMEM47-201ENST00000275954 ADRB3P13945 408 aa13.74□□□□□ -0.21
TMEM47-201ENST00000275954 ITPKBP27987 946 aa13.74□□□□□ -0.21
TMEM47-201ENST00000275954 NPRL3Q12980 569 aa13.74□□□□□ -0.21
TMEM47-201ENST00000275954 DNASE1L3Q13609 305 aa13.74□□□□□ -0.21
TMEM47-201ENST00000275954 SPATS1Q496A3 300 aa13.74□□□□□ -0.21
TMEM47-201ENST00000275954 RUNDC3AQ59EK9 446 aa13.74□□□□□ -0.21
TMEM47-201ENST00000275954 RNF111Q6ZNA4 994 aa13.74□□□□□ -0.21
TMEM47-201ENST00000275954 RPLP0P6Q8NHW5 317 aa13.74□□□□□ -0.21
TMEM47-201ENST00000275954 HLA-CQ95604 372 aa13.74□□□□□ -0.21
TMEM47-201ENST00000275954 TAMM41Q96BW9 452 aa13.74□□□□□ -0.21
TMEM47-201ENST00000275954 RBM18Q96H35 190 aaKnown RBP13.74□□□□□ -0.21
TMEM47-201ENST00000275954 A0A1W2PQU0 124 aa13.74□□□□□ -0.21
TMEM47-201ENST00000275954 KMOO15229 486 aa13.74□□□□□ -0.21
TMEM47-201ENST00000275954 TAPBPO15533 448 aa13.74□□□□□ -0.21
TMEM47-201ENST00000275954 RPLP0P05388 317 aaKnown RBP13.74□□□□□ -0.21
TMEM47-201ENST00000275954 PGDP52209 483 aa13.74□□□□□ -0.21
TMEM47-201ENST00000275954 TXNL4AP83876 142 aaKnown RBP13.74□□□□□ -0.21
TMEM47-201ENST00000275954 ST3GAL4Q11206 333 aa13.74□□□□□ -0.21
TMEM47-201ENST00000275954 ZNF155Q12901 538 aaPredicted RBP13.74□□□□□ -0.21
TMEM47-201ENST00000275954 TSTQ16762 297 aaKnown RBP13.74□□□□□ -0.21
TMEM47-201ENST00000275954 ZNF630Q2M218 657 aaPredicted RBP13.74□□□□□ -0.21
TMEM47-201ENST00000275954 CRTC2Q53ET0 693 aaPredicted RBP13.74□□□□□ -0.21
TMEM47-201ENST00000275954 TOR1AIP1Q5JTV8 583 aa13.74□□□□□ -0.21
TMEM47-201ENST00000275954 MPP7Q5T2T1 576 aa13.74□□□□□ -0.21
TMEM47-201ENST00000275954 PIWIL3Q7Z3Z3 882 aaKnown RBP13.74□□□□□ -0.21
TMEM47-201ENST00000275954 LAPTM4BQ86VI4 370 aa13.74□□□□□ -0.21
TMEM47-201ENST00000275954 CHERPQ8IWX8 916 aaKnown RBP13.74□□□□□ -0.21
TMEM47-201ENST00000275954 ZNF689Q96CS4 500 aaPredicted RBP13.74□□□□□ -0.21
TMEM47-201ENST00000275954 FUNDC2Q9BWH2 189 aa13.74□□□□□ -0.21
TMEM47-201ENST00000275954 P2RX2Q9UBL9 471 aa13.74□□□□□ -0.21
TMEM47-201ENST00000275954 HCN4Q9Y3Q4 1203 aa13.74□□□□□ -0.21
TMEM47-201ENST00000275954 IRAK3Q9Y616 596 aa13.74□□□□□ -0.21
TMEM47-201ENST00000275954 DOCK8Q8NF50 2099 aa13.74□□□□□ -0.21
TMEM47-201ENST00000275954 NINQ8N4C6 2090 aa13.74□□□□□ -0.21
TMEM47-201ENST00000275954 CPED1A4D0V7 1026 aa13.74□□□□□ -0.21
TMEM47-201ENST00000275954 GABRR3A8MPY1 467 aa13.74□□□□□ -0.21
TMEM47-201ENST00000275954 A8MU76 341 aa13.74□□□□□ -0.21
TMEM47-201ENST00000275954 STSP08842 583 aa13.74□□□□□ -0.21
TMEM47-201ENST00000275954 CDKN2CP42773 168 aa13.74□□□□□ -0.21
TMEM47-201ENST00000275954 BIKQ13323 160 aa13.74□□□□□ -0.21
TMEM47-201ENST00000275954 MYBPC3Q14896 1274 aa13.74□□□□□ -0.21
TMEM47-201ENST00000275954 NXPE4Q6UWF7 544 aa13.74□□□□□ -0.21
TMEM47-201ENST00000275954 DNAJC5GQ8N7S2 189 aa13.74□□□□□ -0.21
TMEM47-201ENST00000275954 FAM46DQ8NEK8 389 aa13.74□□□□□ -0.21
TMEM47-201ENST00000275954 ZNF480Q8WV37 535 aa13.74□□□□□ -0.21
TMEM47-201ENST00000275954 DPH7Q9BTV6 452 aa13.74□□□□□ -0.21
TMEM47-201ENST00000275954 RBCK1Q9BYM8 510 aa13.74□□□□□ -0.21
TMEM47-201ENST00000275954 LHPPQ9H008 270 aa13.74□□□□□ -0.21
TMEM47-201ENST00000275954 GIN1Q9NXP7 522 aa13.74□□□□□ -0.21
TMEM47-201ENST00000275954 POFUT2Q9Y2G5 429 aa13.74□□□□□ -0.21
TMEM47-201ENST00000275954 TLR4O00206 839 aa13.73□□□□□ -0.21
TMEM47-201ENST00000275954 CAPN5O15484 640 aaPredicted RBP13.73□□□□□ -0.21
TMEM47-201ENST00000275954 CLPXO76031 633 aa13.73□□□□□ -0.21
TMEM47-201ENST00000275954 CXCL10P02778 98 aa13.73□□□□□ -0.21
TMEM47-201ENST00000275954 SLC7A9P82251 487 aa13.73□□□□□ -0.21
TMEM47-201ENST00000275954 KCNC3Q14003 757 aa13.73□□□□□ -0.21
TMEM47-201ENST00000275954 ANGPT1Q15389 498 aa13.73□□□□□ -0.21
TMEM47-201ENST00000275954 UGT3A2Q3SY77 523 aa13.73□□□□□ -0.21
TMEM47-201ENST00000275954 HMBOX1Q6NT76 420 aa13.73□□□□□ -0.21
TMEM47-201ENST00000275954 KLHL17Q6TDP4 642 aa13.73□□□□□ -0.21
TMEM47-201ENST00000275954 OR4N5Q8IXE1 308 aa13.73□□□□□ -0.21
TMEM47-201ENST00000275954 SLC5A8Q8N695 610 aa13.73□□□□□ -0.21
TMEM47-201ENST00000275954 COX18Q8N8Q8 333 aa13.73□□□□□ -0.21
TMEM47-201ENST00000275954 OR8K5Q8NH50 307 aa13.73□□□□□ -0.21
TMEM47-201ENST00000275954 SPATA6Q9NWH7 488 aaPredicted RBP13.73□□□□□ -0.21
TMEM47-201ENST00000275954 TUBA8Q9NY65 449 aaPredicted RBP13.73□□□□□ -0.21
TMEM47-201ENST00000275954 CD300AQ9UGN4 299 aa13.73□□□□□ -0.21
TMEM47-201ENST00000275954 TMEM202A6NGA9 273 aa13.73□□□□□ -0.21
TMEM47-201ENST00000275954 H0YJX3 145 aa13.73□□□□□ -0.21
TMEM47-201ENST00000275954 SCAMP2O15127 329 aaKnown RBP13.73□□□□□ -0.21
TMEM47-201ENST00000275954 SLC16A5O15375 505 aa13.73□□□□□ -0.21
TMEM47-201ENST00000275954 NUAK1O60285 661 aa13.73□□□□□ -0.21
TMEM47-201ENST00000275954 PRMT3O60678 531 aa13.73□□□□□ -0.21
TMEM47-201ENST00000275954 ZDHHC11BP0C7U3 371 aa13.73□□□□□ -0.21
TMEM47-201ENST00000275954 POLR2CP19387 275 aaPredicted RBP13.73□□□□□ -0.21
TMEM47-201ENST00000275954 SLC5A2P31639 672 aa13.73□□□□□ -0.21
TMEM47-201ENST00000275954 ZNF311Q5JNZ3 666 aa13.73□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms