RNA–Protein interactions for RNA: ENST00000275036.11

HMGN3-201, Transcript of high mobility group nucleosomal binding domain 3, humanhuman

TSL 1 (best) BASIC

Gene HMGN3, Length 831 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN3-201ENST00000275036 TEKT2Q9UIF3 430 aa13.5□□□□□ -0.25
HMGN3-201ENST00000275036 OSGIN2Q9Y236 505 aa13.5□□□□□ -0.25
HMGN3-201ENST00000275036 MMACHCQ9Y4U1 282 aa13.5□□□□□ -0.25
HMGN3-201ENST00000275036 PCNX1Q96RV3 2341 aa13.49□□□□□ -0.25
HMGN3-201ENST00000275036 SAP18O00422 153 aaKnown RBP13.49□□□□□ -0.25
HMGN3-201ENST00000275036 DDAH2O95865 285 aa13.49□□□□□ -0.25
HMGN3-201ENST00000275036 SBK3P0C264 359 aa13.49□□□□□ -0.25
HMGN3-201ENST00000275036 ATP5A1P25705 553 aaKnown RBP13.49□□□□□ -0.25
HMGN3-201ENST00000275036 HSD17B7P56937 341 aa13.49□□□□□ -0.25
HMGN3-201ENST00000275036 TUBA3CQ13748 450 aa13.49□□□□□ -0.25
HMGN3-201ENST00000275036 GTF2H2Q13888 395 aa13.49□□□□□ -0.25
HMGN3-201ENST00000275036 ELOAQ14241 798 aaKnown RBP13.49□□□□□ -0.25
HMGN3-201ENST00000275036 MEP1AQ16819 746 aa13.49□□□□□ -0.25
HMGN3-201ENST00000275036 GTF2H2CQ6P1K8 395 aa13.49□□□□□ -0.25
HMGN3-201ENST00000275036 KLC3Q6P597 504 aa13.49□□□□□ -0.25
HMGN3-201ENST00000275036 TUBA3EQ6PEY2 450 aa13.49□□□□□ -0.25
HMGN3-201ENST00000275036 CLNKQ7Z7G1 428 aa13.49□□□□□ -0.25
HMGN3-201ENST00000275036 IFT20Q8IY31 132 aa13.49□□□□□ -0.25
HMGN3-201ENST00000275036 BCORP1Q8N888 145 aa13.49□□□□□ -0.25
HMGN3-201ENST00000275036 PTGR2Q8N8N7 351 aaPredicted RBP13.49□□□□□ -0.25
HMGN3-201ENST00000275036 APCDD1LQ8NCL9 501 aa13.49□□□□□ -0.25
HMGN3-201ENST00000275036 MDS2Q8NDY4 140 aa13.49□□□□□ -0.25
HMGN3-201ENST00000275036 HUS1BQ8NHY5 278 aa13.49□□□□□ -0.25
HMGN3-201ENST00000275036 NR4A3Q92570 626 aa13.49□□□□□ -0.25
HMGN3-201ENST00000275036 UBE2E3Q969T4 207 aa13.49□□□□□ -0.25
HMGN3-201ENST00000275036 KCNC2Q96PR1 638 aa13.49□□□□□ -0.25
HMGN3-201ENST00000275036 MAPKAP1Q9BPZ7 522 aa13.49□□□□□ -0.25
HMGN3-201ENST00000275036 SORBS1Q9BX66 1292 aaKnown RBP13.49□□□□□ -0.25
HMGN3-201ENST00000275036 TXLNGYQ9BZA5 131 aa13.49□□□□□ -0.25
HMGN3-201ENST00000275036 EPB41L4BQ9H329 900 aa13.49□□□□□ -0.25
HMGN3-201ENST00000275036 OR51B5Q9H339 312 aa13.49□□□□□ -0.25
HMGN3-201ENST00000275036 COPS7BQ9H9Q2 264 aaPredicted RBP13.49□□□□□ -0.25
HMGN3-201ENST00000275036 ANKRD10Q9NXR5 420 aa13.49□□□□□ -0.25
HMGN3-201ENST00000275036 XPR1Q9UBH6 696 aa13.49□□□□□ -0.25
HMGN3-201ENST00000275036 ANGPTL3Q9Y5C1 460 aa13.49□□□□□ -0.25
HMGN3-201ENST00000275036 IKBKGQ9Y6K9 419 aa13.49□□□□□ -0.25
HMGN3-201ENST00000275036 A0A088AWK7 358 aa13.48□□□□□ -0.25
HMGN3-201ENST00000275036 MYOCOSA0A1B0GUC4 107 aa13.48□□□□□ -0.25
HMGN3-201ENST00000275036 EXOC1LA0A1B0GW35 172 aa13.48□□□□□ -0.25
HMGN3-201ENST00000275036 OR7A17O14581 309 aa13.48□□□□□ -0.25
HMGN3-201ENST00000275036 RIPK2O43353 540 aa13.48□□□□□ -0.25
HMGN3-201ENST00000275036 PRAMEF2O60811 474 aa13.48□□□□□ -0.25
HMGN3-201ENST00000275036 KRT38O76015 456 aa13.48□□□□□ -0.25
HMGN3-201ENST00000275036 MYO1DO94832 1006 aa13.48□□□□□ -0.25
HMGN3-201ENST00000275036 SCELO95171 688 aa13.48□□□□□ -0.25
HMGN3-201ENST00000275036 ABHD2P08910 425 aa13.48□□□□□ -0.25
HMGN3-201ENST00000275036 ZNF10P21506 573 aaPredicted RBP13.48□□□□□ -0.25
HMGN3-201ENST00000275036 EEF1DP29692 281 aaKnown RBP13.48□□□□□ -0.25
HMGN3-201ENST00000275036 HPDP32754 393 aaPredicted RBP13.48□□□□□ -0.25
HMGN3-201ENST00000275036 CD96P40200 585 aa13.48□□□□□ -0.25
HMGN3-201ENST00000275036 KCNK10P57789 538 aa13.48□□□□□ -0.25
HMGN3-201ENST00000275036 DDX39BQ13838 428 aaKnown RBP13.48□□□□□ -0.25
HMGN3-201ENST00000275036 INAQ16352 499 aa13.48□□□□□ -0.25
HMGN3-201ENST00000275036 DEPDC1Q5TB30 811 aa13.48□□□□□ -0.25
HMGN3-201ENST00000275036 ZNF468Q5VIY5 522 aaPredicted RBP13.48□□□□□ -0.25
HMGN3-201ENST00000275036 KHDRBS2Q5VWX1 349 aaKnown RBP13.48□□□□□ -0.25
HMGN3-201ENST00000275036 LIPJQ5W064 366 aa13.48□□□□□ -0.25
HMGN3-201ENST00000275036 TAOK1Q7L7X3 1001 aa13.48□□□□□ -0.25
HMGN3-201ENST00000275036 MYLK4Q86YV6 388 aaPredicted RBP13.48□□□□□ -0.25
HMGN3-201ENST00000275036 ZNF595Q8IYB9 648 aa13.48□□□□□ -0.25
HMGN3-201ENST00000275036 GSPT2Q8IYD1 628 aaKnown RBP13.48□□□□□ -0.25
HMGN3-201ENST00000275036 TMEM151AQ8N4L1 468 aa13.48□□□□□ -0.25
HMGN3-201ENST00000275036 ACOT4Q8N9L9 421 aa13.48□□□□□ -0.25
HMGN3-201ENST00000275036 PHF21BQ96EK2 531 aa13.48□□□□□ -0.25
HMGN3-201ENST00000275036 SCYL1Q96KG9 808 aa13.48□□□□□ -0.25
HMGN3-201ENST00000275036 C5orf34Q96MH7 638 aa13.48□□□□□ -0.25
HMGN3-201ENST00000275036 NSUN5Q96P11 429 aaKnown RBP13.48□□□□□ -0.25
HMGN3-201ENST00000275036 MTERF1Q99551 399 aaKnown RBP13.48□□□□□ -0.25
HMGN3-201ENST00000275036 TBCDQ9BTW9 1192 aa13.48□□□□□ -0.25
HMGN3-201ENST00000275036 CDCP1Q9H5V8 836 aa13.48□□□□□ -0.25
HMGN3-201ENST00000275036 IPPKQ9H8X2 491 aa13.48□□□□□ -0.25
HMGN3-201ENST00000275036 ACTR8Q9H981 624 aa13.48□□□□□ -0.25
HMGN3-201ENST00000275036 ZBTB26Q9HCK0 441 aa13.48□□□□□ -0.25
HMGN3-201ENST00000275036 DMRT3Q9NQL9 472 aa13.48□□□□□ -0.25
HMGN3-201ENST00000275036 PNO1Q9NRX1 252 aaKnown RBP13.48□□□□□ -0.25
HMGN3-201ENST00000275036 ZNF223Q9UK11 482 aaPredicted RBP13.48□□□□□ -0.25
HMGN3-201ENST00000275036 RNF11Q9Y3C5 154 aa13.48□□□□□ -0.25
HMGN3-201ENST00000275036 TSC22D4Q9Y3Q8 395 aa13.48□□□□□ -0.25
HMGN3-201ENST00000275036 CENPEQ02224 2701 aa13.48□□□□□ -0.25
HMGN3-201ENST00000275036 GABRR3A8MPY1 467 aa13.47□□□□□ -0.25
HMGN3-201ENST00000275036 H0YIV9 168 aa13.47□□□□□ -0.25
HMGN3-201ENST00000275036 LRRTM2O43300 516 aa13.47□□□□□ -0.25
HMGN3-201ENST00000275036 ETHE1O95571 254 aa13.47□□□□□ -0.25
HMGN3-201ENST00000275036 RBP1P09455 135 aa13.47□□□□□ -0.25
HMGN3-201ENST00000275036 MYBL2P10244 700 aa13.47□□□□□ -0.25
HMGN3-201ENST00000275036 COL6A2P12110 1019 aa13.47□□□□□ -0.25
HMGN3-201ENST00000275036 HIST1H1TP22492 207 aaPredicted RBP13.47□□□□□ -0.25
HMGN3-201ENST00000275036 CNTFP26441 200 aa13.47□□□□□ -0.25
HMGN3-201ENST00000275036 TPP2P29144 1249 aaPredicted RBP13.47□□□□□ -0.25
HMGN3-201ENST00000275036 GPR143P51810 404 aa13.47□□□□□ -0.25
HMGN3-201ENST00000275036 RPS13P62277 151 aaKnown RBP13.47□□□□□ -0.25
HMGN3-201ENST00000275036 TGM3Q08188 693 aa13.47□□□□□ -0.25
HMGN3-201ENST00000275036 SLC13A2Q13183 592 aa13.47□□□□□ -0.25
HMGN3-201ENST00000275036 CPSF6Q16630 551 aaKnown RBP eCLIP13.47□□□□□ -0.25
HMGN3-201ENST00000275036 C4orf17Q53FE4 359 aa13.47□□□□□ -0.25
HMGN3-201ENST00000275036 TMEM35AQ53FP2 167 aa13.47□□□□□ -0.25
HMGN3-201ENST00000275036 ZNF766Q5HY98 468 aa13.47□□□□□ -0.25
HMGN3-201ENST00000275036 FAM219BQ5XKK7 198 aa13.47□□□□□ -0.25
HMGN3-201ENST00000275036 SPINK14Q6IE38 97 aa13.47□□□□□ -0.25
HMGN3-201ENST00000275036 ADGRD1Q6QNK2 874 aa13.47□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms