RNA–Protein interactions for RNA: ENST00000274071.6

PDGFC-201, Transcript of platelet derived growth factor C, humanhuman

TSL 1 (best)

Gene PDGFC, Length 2,987 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFC-201ENST00000274071 PIWIL1Q96J94 861 aaKnown RBP8.85□□□□□ -0.99
PDGFC-201ENST00000274071 VRK1Q99986 396 aaPredicted RBP8.85□□□□□ -0.99
PDGFC-201ENST00000274071 QRSL1Q9H0R6 528 aaKnown RBP8.85□□□□□ -0.99
PDGFC-201ENST00000274071 MAGIXQ9H6Y5 334 aa8.85□□□□□ -0.99
PDGFC-201ENST00000274071 MID1IP1Q9NPA3 183 aa8.85□□□□□ -0.99
PDGFC-201ENST00000274071 AIG1Q9NVV5 245 aa8.85□□□□□ -0.99
PDGFC-201ENST00000274071 SCP2D1Q9UJQ7 156 aa8.85□□□□□ -0.99
PDGFC-201ENST00000274071 IKZF3Q9UKT9 509 aa8.85□□□□□ -0.99
PDGFC-201ENST00000274071 NEUROG3Q9Y4Z2 214 aa8.85□□□□□ -0.99
PDGFC-201ENST00000274071 PCDHGC4Q9Y5F7 938 aa8.85□□□□□ -0.99
PDGFC-201ENST00000274071 PCDHGA5Q9Y5G8 931 aa8.85□□□□□ -0.99
PDGFC-201ENST00000274071 PCDHGA1Q9Y5H4 931 aa8.85□□□□□ -0.99
PDGFC-201ENST00000274071 LTBP3Q9NS15 1303 aa8.85□□□□□ -0.99
PDGFC-201ENST00000274071 LOC105369274A0A096LPK9 316 aa8.85□□□□□ -0.99
PDGFC-201ENST00000274071 A0A1B0GVI7 797 aa8.85□□□□□ -0.99
PDGFC-201ENST00000274071 ANKDD1BA6NHY2 528 aa8.85□□□□□ -0.99
PDGFC-201ENST00000274071 SLC31A2O15432 143 aa8.85□□□□□ -0.99
PDGFC-201ENST00000274071 SDC3O75056 442 aa8.85□□□□□ -0.99
PDGFC-201ENST00000274071 DIRAS1O95057 198 aa8.85□□□□□ -0.99
PDGFC-201ENST00000274071 ADH1CP00326 375 aa8.85□□□□□ -0.99
PDGFC-201ENST00000274071 EGFP01133 1207 aa8.85□□□□□ -0.99
PDGFC-201ENST00000274071 ITGB5P18084 799 aa8.85□□□□□ -0.99
PDGFC-201ENST00000274071 PSMA1P25786 263 aaKnown RBP8.85□□□□□ -0.99
PDGFC-201ENST00000274071 INPP1P49441 399 aa8.85□□□□□ -0.99
PDGFC-201ENST00000274071 TAS2R60P59551 318 aa8.85□□□□□ -0.99
PDGFC-201ENST00000274071 CAMK2GQ13555 558 aaPredicted RBP8.85□□□□□ -0.99
PDGFC-201ENST00000274071 GPR176Q14439 515 aa8.85□□□□□ -0.99
PDGFC-201ENST00000274071 PCID2Q5JVF3 399 aa8.85□□□□□ -0.99
PDGFC-201ENST00000274071 FAM171A1Q5VUB5 890 aa8.85□□□□□ -0.99
PDGFC-201ENST00000274071 ZNF57Q68EA5 555 aaPredicted RBP8.85□□□□□ -0.99
PDGFC-201ENST00000274071 FAM198BQ6UWH4 519 aa8.85□□□□□ -0.99
PDGFC-201ENST00000274071 NUDT18Q6ZVK8 323 aa8.85□□□□□ -0.99
PDGFC-201ENST00000274071 BTN2A1Q7KYR7 527 aa8.85□□□□□ -0.99
PDGFC-201ENST00000274071 CBLN2Q8IUK8 224 aa8.85□□□□□ -0.99
PDGFC-201ENST00000274071 OR4N4Q8N0Y3 316 aa8.85□□□□□ -0.99
PDGFC-201ENST00000274071 OXR1Q8N573 874 aa8.85□□□□□ -0.99
PDGFC-201ENST00000274071 WDSUB1Q8N9V3 476 aa8.85□□□□□ -0.99
PDGFC-201ENST00000274071 UPF1Q92900 1129 aaKnown RBP eCLIP8.85□□□□□ -0.99
PDGFC-201ENST00000274071 VAPAQ9P0L0 249 aa8.85□□□□□ -0.99
PDGFC-201ENST00000274071 PHF11Q9UIL8 331 aa8.85□□□□□ -0.99
PDGFC-201ENST00000274071 ELOVL7A1L3X0 281 aa8.84□□□□□ -0.99
PDGFC-201ENST00000274071 SMIM30A4D0T7 59 aa8.84□□□□□ -0.99
PDGFC-201ENST00000274071 SGK494L7N484 410 aa8.84□□□□□ -0.99
PDGFC-201ENST00000274071 MLYCDO95822 493 aa8.84□□□□□ -0.99
PDGFC-201ENST00000274071 LCN1P31025 176 aa8.84□□□□□ -0.99
PDGFC-201ENST00000274071 HSPA7P48741 367 aa8.84□□□□□ -0.99
PDGFC-201ENST00000274071 SOX10P56693 466 aa8.84□□□□□ -0.99
PDGFC-201ENST00000274071 KHDRBS1Q07666 443 aaKnown RBP eCLIP8.84□□□□□ -0.99
PDGFC-201ENST00000274071 DMP1Q13316 513 aaPredicted RBP8.84□□□□□ -0.99
PDGFC-201ENST00000274071 ATP6AP1LQ52LC2 224 aa8.84□□□□□ -0.99
PDGFC-201ENST00000274071 SYPL2Q5VXT5 272 aa8.84□□□□□ -0.99
PDGFC-201ENST00000274071 C3orf33Q6P1S2 294 aa8.84□□□□□ -0.99
PDGFC-201ENST00000274071 CNIH2Q6PI25 160 aa8.84□□□□□ -0.99
PDGFC-201ENST00000274071 GDPGP1Q6ZNW5 385 aa8.84□□□□□ -0.99
PDGFC-201ENST00000274071 ZNF605Q86T29 641 aa8.84□□□□□ -0.99
PDGFC-201ENST00000274071 ZDHHC21Q8IVQ6 265 aa8.84□□□□□ -0.99
PDGFC-201ENST00000274071 ZNF567Q8N184 647 aa8.84□□□□□ -0.99
PDGFC-201ENST00000274071 OR52E4Q8NGH9 312 aa8.84□□□□□ -0.99
PDGFC-201ENST00000274071 OR14A16Q8NHC5 309 aa8.84□□□□□ -0.99
PDGFC-201ENST00000274071 NETO1Q8TDF5 533 aa8.84□□□□□ -0.99
PDGFC-201ENST00000274071 CSPG4P5Q96PW8 444 aa8.84□□□□□ -0.99
PDGFC-201ENST00000274071 NEU1Q99519 415 aa8.84□□□□□ -0.99
PDGFC-201ENST00000274071 SGIP1Q9BQI5 828 aa8.84□□□□□ -0.99
PDGFC-201ENST00000274071 THUMPD3Q9BV44 507 aaKnown RBP8.84□□□□□ -0.99
PDGFC-201ENST00000274071 IKZF5Q9H5V7 419 aa8.84□□□□□ -0.99
PDGFC-201ENST00000274071 CHMP1AQ9HD42 196 aaPredicted RBP8.84□□□□□ -0.99
PDGFC-201ENST00000274071 HECAQ9UBI9 543 aaPredicted RBP8.84□□□□□ -0.99
PDGFC-201ENST00000274071 MRTO4Q9UKD2 239 aaKnown RBP8.84□□□□□ -0.99
PDGFC-201ENST00000274071 DMRT1Q9Y5R6 373 aa8.84□□□□□ -0.99
PDGFC-201ENST00000274071 A0A087X1B8 175 aa8.84□□□□□ -0.99
PDGFC-201ENST00000274071 A0A0U1RQF3 1178 aa8.84□□□□□ -0.99
PDGFC-201ENST00000274071 OR6C68A6NDL8 312 aa8.84□□□□□ -0.99
PDGFC-201ENST00000274071 OR6C75A6NL08 312 aa8.84□□□□□ -0.99
PDGFC-201ENST00000274071 SCG5P05408 212 aa8.84□□□□□ -0.99
PDGFC-201ENST00000274071 ZDHHC11BP0C7U3 371 aa8.84□□□□□ -0.99
PDGFC-201ENST00000274071 CXCL2P19875 107 aa8.84□□□□□ -0.99
PDGFC-201ENST00000274071 PTBP1P26599 531 aaKnown RBP eCLIP8.84□□□□□ -0.993e-6■■■■□ 25.7
PDGFC-201ENST00000274071 STAT5BP51692 787 aa8.84□□□□□ -0.99
PDGFC-201ENST00000274071 IFRD2Q12894 506 aaPredicted RBP8.84□□□□□ -0.99
PDGFC-201ENST00000274071 IL18Q14116 193 aa8.84□□□□□ -0.99
PDGFC-201ENST00000274071 DGKKQ5KSL6 1271 aa8.84□□□□□ -0.99
PDGFC-201ENST00000274071 DCAF15Q66K64 600 aa8.84□□□□□ -0.99
PDGFC-201ENST00000274071 OR2T5Q6IEZ7 315 aa8.84□□□□□ -0.99
PDGFC-201ENST00000274071 CIR1Q86X95 450 aaPredicted RBP8.84□□□□□ -0.99
PDGFC-201ENST00000274071 LDLRAD3Q86YD5 345 aa8.84□□□□□ -0.99
PDGFC-201ENST00000274071 SLC43A2Q8N370 569 aa8.84□□□□□ -0.99
PDGFC-201ENST00000274071 LIX1Q8N485 282 aa8.84□□□□□ -0.99
PDGFC-201ENST00000274071 B3GNT7Q8NFL0 401 aa8.84□□□□□ -0.99
PDGFC-201ENST00000274071 OR2T29Q8NH02 315 aa8.84□□□□□ -0.99
PDGFC-201ENST00000274071 AKR7LQ8NHP1 331 aa8.84□□□□□ -0.99
PDGFC-201ENST00000274071 IL31RAQ8NI17 732 aa8.84□□□□□ -0.99
PDGFC-201ENST00000274071 TMEM41AQ96HV5 264 aa8.84□□□□□ -0.99
PDGFC-201ENST00000274071 PYURFQ96I23 114 aa8.84□□□□□ -0.99
PDGFC-201ENST00000274071 C14orf144Q96I85 54 aa8.84□□□□□ -0.99
PDGFC-201ENST00000274071 APOL2Q9BQE5 337 aa8.84□□□□□ -0.99
PDGFC-201ENST00000274071 CDCA4Q9BXL8 241 aa8.84□□□□□ -0.99
PDGFC-201ENST00000274071 ELAC1Q9H777 363 aaKnown RBP8.84□□□□□ -0.99
PDGFC-201ENST00000274071 ANKRA2Q9H9E1 313 aa8.84□□□□□ -0.99
PDGFC-201ENST00000274071 NUDT15Q9NV35 164 aa8.84□□□□□ -0.99
PDGFC-201ENST00000274071 PTCH2Q9Y6C5 1203 aa8.84□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 156.1 ms