RNA–Protein interactions for RNA: ENST00000271850.11

TPM3-201, Transcript of tropomyosin 3, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene TPM3, Length 1,219 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-201ENST00000271850 SPNS3Q6ZMD2 512 aa8.32□□□□□ -1.08
TPM3-201ENST00000271850 MEX3BQ6ZN04 569 aaKnown RBP8.32□□□□□ -1.08
TPM3-201ENST00000271850 ZNF793Q6ZN11 406 aa8.32□□□□□ -1.08
TPM3-201ENST00000271850 UBE3DQ7Z6J8 389 aa8.32□□□□□ -1.08
TPM3-201ENST00000271850 CDH24Q86UP0 819 aa8.32□□□□□ -1.08
TPM3-201ENST00000271850 ZC3HC1Q86WB0 502 aaKnown RBP8.32□□□□□ -1.08
TPM3-201ENST00000271850 HORMAD2Q8N7B1 307 aa8.32□□□□□ -1.08
TPM3-201ENST00000271850 FAM47BQ8NA70 645 aa8.32□□□□□ -1.08
TPM3-201ENST00000271850 FAM45AQ8TCE6 357 aa8.32□□□□□ -1.08
TPM3-201ENST00000271850 NRGNQ92686 78 aa8.32□□□□□ -1.08
TPM3-201ENST00000271850 SLCO2A1Q92959 643 aa8.32□□□□□ -1.08
TPM3-201ENST00000271850 RHBDF1Q96CC6 855 aa8.32□□□□□ -1.08
TPM3-201ENST00000271850 CFAP36Q96G28 342 aa8.32□□□□□ -1.08
TPM3-201ENST00000271850 HIST1H2AHQ96KK5 128 aa8.32□□□□□ -1.08
TPM3-201ENST00000271850 CAPZA3Q96KX2 299 aa8.32□□□□□ -1.08
TPM3-201ENST00000271850 HIST1H2AJQ99878 128 aa8.32□□□□□ -1.08
TPM3-201ENST00000271850 H2AFJQ9BTM1 129 aa8.32□□□□□ -1.08
TPM3-201ENST00000271850 DEFB126Q9BYW3 111 aa8.32□□□□□ -1.08
TPM3-201ENST00000271850 RUBCNLQ9H714 662 aa8.32□□□□□ -1.08
TPM3-201ENST00000271850 MCCC2Q9HCC0 563 aa8.32□□□□□ -1.08
TPM3-201ENST00000271850 GPAMQ9HCL2 828 aa8.32□□□□□ -1.08
TPM3-201ENST00000271850 RNF6Q9Y252 685 aa8.32□□□□□ -1.08
TPM3-201ENST00000271850 PHF3Q92576 2039 aaKnown RBP8.31□□□□□ -1.08
TPM3-201ENST00000271850 LRIT2A6NDA9 550 aa8.31□□□□□ -1.08
TPM3-201ENST00000271850 G3V3Y1 287 aa8.31□□□□□ -1.08
TPM3-201ENST00000271850 PRRG2O14669 202 aa8.31□□□□□ -1.08
TPM3-201ENST00000271850 TFECO14948 347 aaPredicted RBP8.31□□□□□ -1.08
TPM3-201ENST00000271850 FANCGO15287 622 aa8.31□□□□□ -1.08
TPM3-201ENST00000271850 CDC40O60508 579 aaKnown RBP eCLIP8.31□□□□□ -1.08
TPM3-201ENST00000271850 OR2J2O76002 312 aa8.31□□□□□ -1.08
TPM3-201ENST00000271850 PDE9AO76083 593 aa8.31□□□□□ -1.08
TPM3-201ENST00000271850 GLSO94925 669 aaPredicted RBP8.31□□□□□ -1.08
TPM3-201ENST00000271850 C1QAP02745 245 aa8.31□□□□□ -1.08
TPM3-201ENST00000271850 PROCP04070 461 aa8.31□□□□□ -1.08
TPM3-201ENST00000271850 TPOP07202 933 aa8.31□□□□□ -1.08
TPM3-201ENST00000271850 CELA3AP09093 270 aa8.31□□□□□ -1.08
TPM3-201ENST00000271850 CERS1P27544 350 aa8.31□□□□□ -1.08
TPM3-201ENST00000271850 MSX1P28360 303 aa8.31□□□□□ -1.08
TPM3-201ENST00000271850 PTGS2P35354 604 aa8.31□□□□□ -1.08
TPM3-201ENST00000271850 CLCN2P51788 898 aa8.31□□□□□ -1.08
TPM3-201ENST00000271850 RAB38P57729 211 aa8.31□□□□□ -1.08
TPM3-201ENST00000271850 NUP107P57740 925 aa8.31□□□□□ -1.08
TPM3-201ENST00000271850 CDKL1Q00532 357 aa8.31□□□□□ -1.08
TPM3-201ENST00000271850 FRG1Q14331 258 aaKnown RBP8.31□□□□□ -1.08
TPM3-201ENST00000271850 SLBPQ14493 270 aaKnown RBP eCLIP8.31□□□□□ -1.08
TPM3-201ENST00000271850 RBBP5Q15291 538 aaKnown RBP8.31□□□□□ -1.08
TPM3-201ENST00000271850 TERF2Q15554 542 aa8.31□□□□□ -1.08
TPM3-201ENST00000271850 RTL6Q6ICC9 239 aa8.31□□□□□ -1.08
TPM3-201ENST00000271850 CEP128Q6ZU80 1094 aa8.31□□□□□ -1.08
TPM3-201ENST00000271850 CLNKQ7Z7G1 428 aa8.31□□□□□ -1.08
TPM3-201ENST00000271850 CCDC71Q8IV32 467 aaPredicted RBP8.31□□□□□ -1.08
TPM3-201ENST00000271850 PALM2Q8IXS6 379 aa8.31□□□□□ -1.08
TPM3-201ENST00000271850 CYP4Z2PQ8N1L4 340 aa8.31□□□□□ -1.08
TPM3-201ENST00000271850 SPATA6LQ8N4H0 392 aa8.31□□□□□ -1.08
TPM3-201ENST00000271850 POGLUT1Q8NBL1 392 aa8.31□□□□□ -1.08
TPM3-201ENST00000271850 FAM98AQ8NCA5 519 aaKnown RBP8.31□□□□□ -1.08
TPM3-201ENST00000271850 PSD4Q8NDX1 1056 aa8.31□□□□□ -1.08
TPM3-201ENST00000271850 TRPV3Q8NET8 790 aa8.31□□□□□ -1.08
TPM3-201ENST00000271850 PTPMT1Q8WUK0 201 aaPredicted RBP8.31□□□□□ -1.08
TPM3-201ENST00000271850 GAL3ST3Q96A11 431 aa8.31□□□□□ -1.08
TPM3-201ENST00000271850 ESAMQ96AP7 390 aa8.31□□□□□ -1.08
TPM3-201ENST00000271850 ZNF395Q9H8N7 513 aaPredicted RBP8.31□□□□□ -1.08
TPM3-201ENST00000271850 ZDHHC11Q9H8X9 412 aa8.31□□□□□ -1.08
TPM3-201ENST00000271850 CLK4Q9HAZ1 481 aaKnown RBP8.31□□□□□ -1.08
TPM3-201ENST00000271850 PNO1Q9NRX1 252 aaKnown RBP8.31□□□□□ -1.08
TPM3-201ENST00000271850 MOCS1Q9NZB8 636 aa8.31□□□□□ -1.08
TPM3-201ENST00000271850 KCMF1Q9P0J7 381 aa8.31□□□□□ -1.08
TPM3-201ENST00000271850 TNFRSF10DQ9UBN6 386 aa8.31□□□□□ -1.08
TPM3-201ENST00000271850 ASIC3Q9UHC3 531 aa8.31□□□□□ -1.08
TPM3-201ENST00000271850 FBXW2Q9UKT8 454 aa8.31□□□□□ -1.08
TPM3-201ENST00000271850 ZNF490Q9ULM2 529 aaPredicted RBP8.31□□□□□ -1.08
TPM3-201ENST00000271850 SNX12Q9UMY4 172 aa8.31□□□□□ -1.08
TPM3-201ENST00000271850 KLF13Q9Y2Y9 288 aaPredicted RBP8.31□□□□□ -1.08
TPM3-201ENST00000271850 MMACHCQ9Y4U1 282 aa8.31□□□□□ -1.08
TPM3-201ENST00000271850 OARD1Q9Y530 152 aa8.31□□□□□ -1.08
TPM3-201ENST00000271850 FAM215AQ9Y5M1 114 aa8.31□□□□□ -1.08
TPM3-201ENST00000271850 NCKAP5O14513 1909 aa8.31□□□□□ -1.08
TPM3-201ENST00000271850 ACANP16112 2415 aa8.3□□□□□ -1.08
TPM3-201ENST00000271850 FAM95CA0A1B0GW59 222 aa8.3□□□□□ -1.08
TPM3-201ENST00000271850 FAM90A27PA6NNH2 459 aa8.3□□□□□ -1.08
TPM3-201ENST00000271850 FAM166BA8MTA8 275 aa8.3□□□□□ -1.08
TPM3-201ENST00000271850 ERI3O43414 337 aaKnown RBP8.3□□□□□ -1.08
TPM3-201ENST00000271850 WDR47O94967 919 aa8.3□□□□□ -1.08
TPM3-201ENST00000271850 MLYCDO95822 493 aa8.3□□□□□ -1.08
TPM3-201ENST00000271850 C1GALT1C1LP0DN25 315 aa8.3□□□□□ -1.08
TPM3-201ENST00000271850 ENDOUP21128 410 aaKnown RBP8.3□□□□□ -1.08
TPM3-201ENST00000271850 SOX3P41225 446 aa8.3□□□□□ -1.08
TPM3-201ENST00000271850 HK2P52789 917 aa8.3□□□□□ -1.08
TPM3-201ENST00000271850 LIM2P55344 173 aa8.3□□□□□ -1.08
TPM3-201ENST00000271850 FOXO1Q12778 655 aa8.3□□□□□ -1.08
TPM3-201ENST00000271850 PPP1R7Q15435 360 aa8.3□□□□□ -1.08
TPM3-201ENST00000271850 ZNF750Q32MQ0 723 aa8.3□□□□□ -1.08
TPM3-201ENST00000271850 DGAT2L6Q6ZPD8 337 aa8.3□□□□□ -1.08
TPM3-201ENST00000271850 ANKMY2Q8IV38 441 aa8.3□□□□□ -1.08
TPM3-201ENST00000271850 LIX1LQ8IVB5 337 aa8.3□□□□□ -1.08
TPM3-201ENST00000271850 OR2M7Q8NG81 312 aa8.3□□□□□ -1.08
TPM3-201ENST00000271850 LILRB4Q8NHJ6 448 aa8.3□□□□□ -1.08
TPM3-201ENST00000271850 GRK7Q8WTQ7 553 aa8.3□□□□□ -1.08
TPM3-201ENST00000271850 CA5BP1Q8WTZ4 195 aa8.3□□□□□ -1.08
TPM3-201ENST00000271850 ATL1Q8WXF7 558 aa8.3□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 688.5 ms