RNA–Protein interactions for RNA: ENST00000269571.9

ERBB2-201, Transcript of erb-b2 receptor tyrosine kinase 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ERBB2, Length 4,545 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERBB2-201ENST00000269571 NUDT1P36639 197 aa11.64□□□□□ -0.55
ERBB2-201ENST00000269571 TPMTP51580 245 aa11.64□□□□□ -0.55
ERBB2-201ENST00000269571 GRSF1Q12849 480 aaKnown RBP eCLIP11.64□□□□□ -0.55
ERBB2-201ENST00000269571 SLX4IPQ5VYV7 408 aa11.64□□□□□ -0.55
ERBB2-201ENST00000269571 FAM180BQ6P0A1 224 aa11.64□□□□□ -0.55
ERBB2-201ENST00000269571 SHQ1Q6PI26 577 aaKnown RBP11.64□□□□□ -0.55
ERBB2-201ENST00000269571 CEACAM20Q6UY09 585 aa11.64□□□□□ -0.55
ERBB2-201ENST00000269571 RNF130Q86XS8 419 aa11.64□□□□□ -0.55
ERBB2-201ENST00000269571 DNAJB8Q8NHS0 232 aa11.64□□□□□ -0.55
ERBB2-201ENST00000269571 RHEBL1Q8TAI7 183 aa11.64□□□□□ -0.55
ERBB2-201ENST00000269571 NUDT8Q8WV74 236 aa11.64□□□□□ -0.55
ERBB2-201ENST00000269571 PCNPQ8WW12 178 aaKnown RBP11.64□□□□□ -0.55
ERBB2-201ENST00000269571 SGCDQ92629 289 aa11.64□□□□□ -0.55
ERBB2-201ENST00000269571 FUBP1Q96AE4 644 aaKnown RBP11.64□□□□□ -0.55
ERBB2-201ENST00000269571 KCNN2Q9H2S1 579 aa11.64□□□□□ -0.55
ERBB2-201ENST00000269571 ERVMER34-1Q9H9K5 563 aa11.64□□□□□ -0.55
ERBB2-201ENST00000269571 SCPEP1Q9HB40 452 aa11.64□□□□□ -0.55
ERBB2-201ENST00000269571 RC3H2Q9HBD1 1191 aaKnown RBP11.64□□□□□ -0.55
ERBB2-201ENST00000269571 A0A1W2PPK0 400 aa11.64□□□□□ -0.55
ERBB2-201ENST00000269571 EDNRBP24530 442 aa11.64□□□□□ -0.55
ERBB2-201ENST00000269571 ACSL1P33121 698 aa11.64□□□□□ -0.55
ERBB2-201ENST00000269571 HSF5Q4G112 596 aaPredicted RBP11.64□□□□□ -0.55
ERBB2-201ENST00000269571 NHSL1Q5SYE7 1610 aa11.64□□□□□ -0.55
ERBB2-201ENST00000269571 KRT77Q7Z794 578 aa11.64□□□□□ -0.55
ERBB2-201ENST00000269571 SLC38A6Q8IZM9 456 aa11.64□□□□□ -0.55
ERBB2-201ENST00000269571 GDPD1Q8N9F7 314 aa11.64□□□□□ -0.55
ERBB2-201ENST00000269571 AHCYL2Q96HN2 611 aaKnown RBP11.64□□□□□ -0.55
ERBB2-201ENST00000269571 ARL5BQ96KC2 179 aa11.64□□□□□ -0.55
ERBB2-201ENST00000269571 SMIM14Q96QK8 99 aa11.64□□□□□ -0.55
ERBB2-201ENST00000269571 TSSK6Q9BXA6 273 aa11.64□□□□□ -0.55
ERBB2-201ENST00000269571 ARHGAP39Q9C0H5 1083 aa11.64□□□□□ -0.55
ERBB2-201ENST00000269571 EXTL2Q9UBQ6 330 aa11.64□□□□□ -0.55
ERBB2-201ENST00000269571 SEC14L4Q9UDX3 406 aa11.64□□□□□ -0.55
ERBB2-201ENST00000269571 GJD2Q9UKL4 321 aa11.64□□□□□ -0.55
ERBB2-201ENST00000269571 FBXW2Q9UKT8 454 aa11.64□□□□□ -0.55
ERBB2-201ENST00000269571 ACSL6Q9UKU0 697 aa11.64□□□□□ -0.55
ERBB2-201ENST00000269571 MEIS3P2A8K0S8 358 aa11.64□□□□□ -0.55
ERBB2-201ENST00000269571 PEPDP12955 493 aa11.64□□□□□ -0.55
ERBB2-201ENST00000269571 LAMP2P13473 410 aa11.64□□□□□ -0.55
ERBB2-201ENST00000269571 MNDAP41218 407 aa11.64□□□□□ -0.55
ERBB2-201ENST00000269571 CSKP41240 450 aa11.64□□□□□ -0.55
ERBB2-201ENST00000269571 FNTBP49356 437 aa11.64□□□□□ -0.55
ERBB2-201ENST00000269571 SLBPQ14493 270 aaKnown RBP eCLIP11.64□□□□□ -0.55
ERBB2-201ENST00000269571 KANK2Q63ZY3 851 aa11.64□□□□□ -0.55
ERBB2-201ENST00000269571 ATG9BQ674R7 924 aa11.64□□□□□ -0.55
ERBB2-201ENST00000269571 TXNDC8Q6A555 127 aa11.64□□□□□ -0.55
ERBB2-201ENST00000269571 NOXRED1Q6NXP6 359 aa11.64□□□□□ -0.55
ERBB2-201ENST00000269571 PRSS48Q7RTY5 328 aa11.64□□□□□ -0.55
ERBB2-201ENST00000269571 YIPF7Q8N8F6 280 aa11.64□□□□□ -0.55
ERBB2-201ENST00000269571 FAM83FQ8NEG4 500 aaPredicted RBP11.64□□□□□ -0.55
ERBB2-201ENST00000269571 RFKQ969G6 155 aa11.64□□□□□ -0.55
ERBB2-201ENST00000269571 TMEM80Q96HE8 168 aa11.64□□□□□ -0.55
ERBB2-201ENST00000269571 CNDP2Q96KP4 475 aaKnown RBP11.64□□□□□ -0.55
ERBB2-201ENST00000269571 C12orf66Q96MD2 445 aa11.64□□□□□ -0.55
ERBB2-201ENST00000269571 PAAF1Q9BRP4 392 aa11.64□□□□□ -0.55
ERBB2-201ENST00000269571 CD244Q9BZW8 370 aa11.64□□□□□ -0.55
ERBB2-201ENST00000269571 KCNH6Q9H252 994 aa11.64□□□□□ -0.55
ERBB2-201ENST00000269571 SLC45A1Q9Y2W3 748 aa11.64□□□□□ -0.55
ERBB2-201ENST00000269571 IRGMA1A4Y4 181 aa11.63□□□□□ -0.55
ERBB2-201ENST00000269571 MATN4O95460 622 aa11.63□□□□□ -0.55
ERBB2-201ENST00000269571 POP4O95707 220 aaKnown RBP11.63□□□□□ -0.55
ERBB2-201ENST00000269571 PDYNP01213 254 aa11.63□□□□□ -0.55
ERBB2-201ENST00000269571 ERVFC1P60507 584 aa11.63□□□□□ -0.55
ERBB2-201ENST00000269571 PPIGQ13427 754 aaKnown RBP eCLIP11.63□□□□□ -0.554e-7■□□□□ 10.4
ERBB2-201ENST00000269571 FGL2Q14314 439 aa11.63□□□□□ -0.55
ERBB2-201ENST00000269571 NDUFAF5Q5TEU4 345 aa11.63□□□□□ -0.55
ERBB2-201ENST00000269571 METTL2BQ6P1Q9 378 aaKnown RBP11.63□□□□□ -0.55
ERBB2-201ENST00000269571 FRRS1Q6ZNA5 592 aa11.63□□□□□ -0.55
ERBB2-201ENST00000269571 TSPYL5Q86VY4 417 aaPredicted RBP11.63□□□□□ -0.55
ERBB2-201ENST00000269571 NPAS4Q8IUM7 802 aa11.63□□□□□ -0.55
ERBB2-201ENST00000269571 LYSMD2Q8IV50 215 aa11.63□□□□□ -0.55
ERBB2-201ENST00000269571 NPAS3Q8IXF0 933 aa11.63□□□□□ -0.55
ERBB2-201ENST00000269571 PIGXQ8TBF5 258 aa11.63□□□□□ -0.55
ERBB2-201ENST00000269571 SETD6Q8TBK2 473 aa11.63□□□□□ -0.55
ERBB2-201ENST00000269571 KCNJ9Q92806 393 aa11.63□□□□□ -0.55
ERBB2-201ENST00000269571 TTLL2Q9BWV7 592 aa11.63□□□□□ -0.55
ERBB2-201ENST00000269571 HDHD5Q9BXW7 423 aa11.63□□□□□ -0.55
ERBB2-201ENST00000269571 PRMT8Q9NR22 394 aaPredicted RBP11.63□□□□□ -0.55
ERBB2-201ENST00000269571 PCTPQ9UKL6 214 aa11.63□□□□□ -0.55
ERBB2-201ENST00000269571 NWD2Q9ULI1 1742 aa11.63□□□□□ -0.55
ERBB2-201ENST00000269571 APOC1P02654 83 aa11.63□□□□□ -0.55
ERBB2-201ENST00000269571 MEF2AQ02078 507 aaPredicted RBP11.63□□□□□ -0.55
ERBB2-201ENST00000269571 SPATS1Q496A3 300 aa11.63□□□□□ -0.55
ERBB2-201ENST00000269571 SLC35F1Q5T1Q4 408 aa11.63□□□□□ -0.55
ERBB2-201ENST00000269571 FAM219BQ5XKK7 198 aa11.63□□□□□ -0.55
ERBB2-201ENST00000269571 TBPL2Q6SJ96 375 aa11.63□□□□□ -0.55
ERBB2-201ENST00000269571 FAM220AQ7Z4H9 259 aa11.63□□□□□ -0.55
ERBB2-201ENST00000269571 PAPD5Q8NDF8 572 aaKnown RBP11.63□□□□□ -0.55
ERBB2-201ENST00000269571 FAM46DQ8NEK8 389 aa11.63□□□□□ -0.55
ERBB2-201ENST00000269571 IGSF8Q969P0 613 aa11.63□□□□□ -0.55
ERBB2-201ENST00000269571 SLC2A13Q96QE2 648 aa11.63□□□□□ -0.55
ERBB2-201ENST00000269571 TRMT61BQ9BVS5 477 aaKnown RBP11.63□□□□□ -0.55
ERBB2-201ENST00000269571 SMOC2Q9H3U7 446 aa11.63□□□□□ -0.55
ERBB2-201ENST00000269571 IFT46Q9NQC8 304 aa11.63□□□□□ -0.55
ERBB2-201ENST00000269571 TAS2R3Q9NYW6 316 aa11.63□□□□□ -0.55
ERBB2-201ENST00000269571 NPAP1Q9NZP6 1156 aa11.63□□□□□ -0.55
ERBB2-201ENST00000269571 YARS2Q9Y2Z4 477 aaKnown RBP11.63□□□□□ -0.55
ERBB2-201ENST00000269571 PLCH1Q4KWH8 1693 aa11.63□□□□□ -0.55
ERBB2-201ENST00000269571 MYH9P35579 1960 aaKnown RBP11.63□□□□□ -0.55
ERBB2-201ENST00000269571 A0A1W2PRU2 124 aa11.63□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms