RNA–Protein interactions for RNA: ENST00000266085.6

TIMP3-201, Transcript of TIMP metallopeptidase inhibitor 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TIMP3, Length 4,603 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TIMP3-201ENST00000266085 COQ5Q5HYK3 327 aa14.8□□□□□ -0.04
TIMP3-201ENST00000266085 SLC25A24Q6NUK1 477 aa14.8□□□□□ -0.04
TIMP3-201ENST00000266085 MEIOBQ8N635 442 aa14.8□□□□□ -0.04
TIMP3-201ENST00000266085 SREK1IP1Q8N9Q2 155 aaPredicted RBP14.8□□□□□ -0.04
TIMP3-201ENST00000266085 SPPL3Q8TCT6 385 aa14.8□□□□□ -0.04
TIMP3-201ENST00000266085 PRR11Q96HE9 360 aaPredicted RBP14.8□□□□□ -0.04
TIMP3-201ENST00000266085 PTCHD1Q96NR3 888 aa14.8□□□□□ -0.04
TIMP3-201ENST00000266085 STOX2Q9P2F5 926 aaPredicted RBP14.8□□□□□ -0.04
TIMP3-201ENST00000266085 ING4Q9UNL4 249 aa14.8□□□□□ -0.04
TIMP3-201ENST00000266085 PCDHGB1Q9Y5G3 927 aa14.8□□□□□ -0.04
TIMP3-201ENST00000266085 TGFBR2P37173 567 aa14.79□□□□□ -0.04
TIMP3-201ENST00000266085 TRAM2Q15035 370 aa14.79□□□□□ -0.04
TIMP3-201ENST00000266085 KANK2Q63ZY3 851 aa14.79□□□□□ -0.04
TIMP3-201ENST00000266085 DPY19L2P1Q6NXN4 242 aa14.79□□□□□ -0.04
TIMP3-201ENST00000266085 HACD2Q6Y1H2 254 aa14.79□□□□□ -0.04
TIMP3-201ENST00000266085 RPLP0P6Q8NHW5 317 aa14.79□□□□□ -0.04
TIMP3-201ENST00000266085 PHF12Q96QT6 1004 aa14.79□□□□□ -0.04
TIMP3-201ENST00000266085 MARCH7Q9H992 704 aa14.79□□□□□ -0.04
TIMP3-201ENST00000266085 LMAN1LQ9HAT1 526 aa14.79□□□□□ -0.04
TIMP3-201ENST00000266085 PDE7BQ9NP56 450 aa14.79□□□□□ -0.04
TIMP3-201ENST00000266085 ING3Q9NXR8 418 aa14.79□□□□□ -0.04
TIMP3-201ENST00000266085 SUSD2Q9UGT4 822 aa14.79□□□□□ -0.04
TIMP3-201ENST00000266085 LAMA4Q16363 1823 aa14.79□□□□□ -0.04
TIMP3-201ENST00000266085 C1orf226A1L170 272 aa14.79□□□□□ -0.04
TIMP3-201ENST00000266085 TIMP2P16035 220 aa14.79□□□□□ -0.04
TIMP3-201ENST00000266085 GBX2P52951 348 aaPredicted RBP14.79□□□□□ -0.04
TIMP3-201ENST00000266085 FAM78AQ5JUQ0 283 aa14.79□□□□□ -0.04
TIMP3-201ENST00000266085 USP43Q70EL4 1123 aa14.79□□□□□ -0.04
TIMP3-201ENST00000266085 CAPSLQ8WWF8 208 aa14.79□□□□□ -0.04
TIMP3-201ENST00000266085 CRELD1Q96HD1 420 aa14.79□□□□□ -0.04
TIMP3-201ENST00000266085 ZBP1Q9H171 429 aa14.79□□□□□ -0.04
TIMP3-201ENST00000266085 GPRC5BQ9NZH0 403 aa14.79□□□□□ -0.04
TIMP3-201ENST00000266085 RHCGQ9UBD6 479 aa14.79□□□□□ -0.04
TIMP3-201ENST00000266085 SCML1Q9UN30 329 aa14.79□□□□□ -0.04
TIMP3-201ENST00000266085 CCL26Q9Y258 94 aa14.79□□□□□ -0.04
TIMP3-201ENST00000266085 SIPA1L3O60292 1781 aaPredicted RBP14.79□□□□□ -0.04
TIMP3-201ENST00000266085 ANXA2P2A6NMY6 339 aa14.79□□□□□ -0.04
TIMP3-201ENST00000266085 RFXAPO00287 272 aa14.79□□□□□ -0.04
TIMP3-201ENST00000266085 KCNJ13O60928 360 aa14.79□□□□□ -0.04
TIMP3-201ENST00000266085 ANXA2P07355 339 aaKnown RBP14.79□□□□□ -0.04
TIMP3-201ENST00000266085 HNRNPKP61978 463 aaKnown RBP eCLIP14.79□□□□□ -0.04
TIMP3-201ENST00000266085 DHRS4Q9BTZ2 278 aa14.79□□□□□ -0.04
TIMP3-201ENST00000266085 MGAT4BQ9UQ53 548 aa14.79□□□□□ -0.04
TIMP3-201ENST00000266085 DDX60LQ5H9U9 1706 aaKnown RBP14.79□□□□□ -0.04
TIMP3-201ENST00000266085 LINC01553A4QN01 128 aa14.78□□□□□ -0.04
TIMP3-201ENST00000266085 FGF4P08620 206 aa14.78□□□□□ -0.04
TIMP3-201ENST00000266085 ZNF800Q2TB10 664 aaPredicted RBP eCLIP14.78□□□□□ -0.04
TIMP3-201ENST00000266085 TMEM35AQ53FP2 167 aa14.78□□□□□ -0.04
TIMP3-201ENST00000266085 FBXL8Q96CD0 374 aa14.78□□□□□ -0.04
TIMP3-201ENST00000266085 FBXL20Q96IG2 436 aa14.78□□□□□ -0.04
TIMP3-201ENST00000266085 PRTFDC1Q9NRG1 225 aa14.78□□□□□ -0.04
TIMP3-201ENST00000266085 LIPT1Q9Y234 373 aa14.78□□□□□ -0.04
TIMP3-201ENST00000266085 CAPN14A8MX76 684 aa14.78□□□□□ -0.04
TIMP3-201ENST00000266085 ZNF217O75362 1048 aa14.78□□□□□ -0.04
TIMP3-201ENST00000266085 CLIC3O95833 236 aa14.78□□□□□ -0.04
TIMP3-201ENST00000266085 GJA4P35212 333 aa14.78□□□□□ -0.04
TIMP3-201ENST00000266085 CDH11P55287 796 aa14.78□□□□□ -0.04
TIMP3-201ENST00000266085 RAB25P57735 213 aa14.78□□□□□ -0.04
TIMP3-201ENST00000266085 RPA4Q13156 261 aa14.78□□□□□ -0.04
TIMP3-201ENST00000266085 TLR1Q15399 786 aa14.78□□□□□ -0.04
TIMP3-201ENST00000266085 CDKL4Q5MAI5 379 aa14.78□□□□□ -0.04
TIMP3-201ENST00000266085 C12orf40Q86WS4 652 aa14.78□□□□□ -0.04
TIMP3-201ENST00000266085 OR5M3Q8NGP4 307 aa14.78□□□□□ -0.04
TIMP3-201ENST00000266085 OR5AR1Q8NGP9 310 aa14.78□□□□□ -0.04
TIMP3-201ENST00000266085 RHBDF1Q96CC6 855 aa14.78□□□□□ -0.04
TIMP3-201ENST00000266085 CNDP2Q96KP4 475 aaKnown RBP14.78□□□□□ -0.04
TIMP3-201ENST00000266085 DOHHQ9BU89 302 aa14.78□□□□□ -0.04
TIMP3-201ENST00000266085 SDHAF3Q9NRP4 125 aa14.78□□□□□ -0.04
TIMP3-201ENST00000266085 ADAM17P78536 824 aa14.78□□□□□ -0.04
TIMP3-201ENST00000266085 KCNAB2Q13303 367 aa14.78□□□□□ -0.04
TIMP3-201ENST00000266085 CNPY1Q3B7I2 92 aa14.78□□□□□ -0.04
TIMP3-201ENST00000266085 HSDL2Q6YN16 418 aa14.78□□□□□ -0.04
TIMP3-201ENST00000266085 BTN2A1Q7KYR7 527 aa14.78□□□□□ -0.04
TIMP3-201ENST00000266085 ANKRD33Q7Z3H0 272 aa14.78□□□□□ -0.04
TIMP3-201ENST00000266085 NANOGNBQ7Z5D8 188 aa14.78□□□□□ -0.04
TIMP3-201ENST00000266085 CSNK1A1LQ8N752 337 aa14.78□□□□□ -0.04
TIMP3-201ENST00000266085 ZNF676Q8N7Q3 588 aa14.78□□□□□ -0.04
TIMP3-201ENST00000266085 CHST4Q8NCG5 386 aa14.78□□□□□ -0.04
TIMP3-201ENST00000266085 BBS10Q8TAM1 723 aa14.78□□□□□ -0.04
TIMP3-201ENST00000266085 TRIM3O75382 744 aaPredicted RBP14.78□□□□□ -0.04
TIMP3-201ENST00000266085 SERPINA3P01011 423 aa14.78□□□□□ -0.04
TIMP3-201ENST00000266085 FHP07954 510 aa14.78□□□□□ -0.04
TIMP3-201ENST00000266085 TACSTD2P09758 323 aa14.78□□□□□ -0.04
TIMP3-201ENST00000266085 OR12D1P0DN82 309 aa14.78□□□□□ -0.04
TIMP3-201ENST00000266085 IFI30P13284 250 aa14.78□□□□□ -0.04
TIMP3-201ENST00000266085 POU6F2P78424 691 aaPredicted RBP14.78□□□□□ -0.04
TIMP3-201ENST00000266085 PON3Q15166 354 aa14.78□□□□□ -0.04
TIMP3-201ENST00000266085 ATP6AP1Q15904 470 aa14.78□□□□□ -0.04
TIMP3-201ENST00000266085 MEP1AQ16819 746 aa14.78□□□□□ -0.04
TIMP3-201ENST00000266085 IER5LQ5T953 404 aa14.78□□□□□ -0.04
TIMP3-201ENST00000266085 SHQ1Q6PI26 577 aaKnown RBP14.78□□□□□ -0.04
TIMP3-201ENST00000266085 DPPA4Q7L190 304 aa14.78□□□□□ -0.04
TIMP3-201ENST00000266085 ZNF761Q86XN6 746 aaPredicted RBP14.78□□□□□ -0.04
TIMP3-201ENST00000266085 RAB43Q86YS6 212 aa14.78□□□□□ -0.04
TIMP3-201ENST00000266085 MYRFLQ96LU7 910 aa14.78□□□□□ -0.04
TIMP3-201ENST00000266085 GSTO2Q9H4Y5 243 aa14.78□□□□□ -0.04
TIMP3-201ENST00000266085 KLRF1Q9NZS2 232 aa14.78□□□□□ -0.04
TIMP3-201ENST00000266085 LHX3Q9UBR4 397 aa14.78□□□□□ -0.04
TIMP3-201ENST00000266085 C19orf25Q9UFG5 118 aaPredicted RBP14.78□□□□□ -0.04
TIMP3-201ENST00000266085 PHIPQ8WWQ0 1821 aa14.78□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms