RNA–Protein interactions for RNA: ENST00000265810.8

PDLIM2-201, Transcript of PDZ and LIM domain 2, humanhuman

TSL 1 (best) BASIC

Gene PDLIM2, Length 4,592 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-201ENST00000265810 LRIT1Q9P2V4 623 aa13.82□□□□□ -0.2
PDLIM2-201ENST00000265810 TBC1D29Q9UFV1 150 aa13.82□□□□□ -0.2
PDLIM2-201ENST00000265810 PCDHB14Q9Y5E9 798 aa13.82□□□□□ -0.2
PDLIM2-201ENST00000265810 SCN5AQ14524 2016 aa13.82□□□□□ -0.2
PDLIM2-201ENST00000265810 A0A0J9YY10 115 aa13.82□□□□□ -0.2
PDLIM2-201ENST00000265810 EME2A4GXA9 379 aaPredicted RBP13.82□□□□□ -0.2
PDLIM2-201ENST00000265810 NME4O00746 187 aa13.82□□□□□ -0.2
PDLIM2-201ENST00000265810 OCM2P0CE71 109 aa13.82□□□□□ -0.2
PDLIM2-201ENST00000265810 OCMP0CE72 109 aaPredicted RBP13.82□□□□□ -0.2
PDLIM2-201ENST00000265810 IL9P15248 144 aa13.82□□□□□ -0.2
PDLIM2-201ENST00000265810 TACR1P25103 407 aa13.82□□□□□ -0.2
PDLIM2-201ENST00000265810 RACK1P63244 317 aaKnown RBP13.82□□□□□ -0.2
PDLIM2-201ENST00000265810 RCAN2Q14206 197 aa13.82□□□□□ -0.2
PDLIM2-201ENST00000265810 RBM12BQ8IXT5 1001 aaKnown RBP13.82□□□□□ -0.2
PDLIM2-201ENST00000265810 L3MBTL4Q8NA19 623 aa13.82□□□□□ -0.2
PDLIM2-201ENST00000265810 PMEPA1Q969W9 287 aa13.82□□□□□ -0.2
PDLIM2-201ENST00000265810 PYURFQ96I23 114 aa13.82□□□□□ -0.2
PDLIM2-201ENST00000265810 C9J4A7 227 aa13.81□□□□□ -0.2
PDLIM2-201ENST00000265810 ZNF821O75541 412 aaPredicted RBP13.81□□□□□ -0.2
PDLIM2-201ENST00000265810 RNH1P13489 461 aaKnown RBP13.81□□□□□ -0.2
PDLIM2-201ENST00000265810 IL12BP29460 328 aa13.81□□□□□ -0.2
PDLIM2-201ENST00000265810 KIAA1024LP59773 190 aa13.81□□□□□ -0.2
PDLIM2-201ENST00000265810 SHC2P98077 582 aa13.81□□□□□ -0.2
PDLIM2-201ENST00000265810 VMACQ2NL98 169 aa13.81□□□□□ -0.2
PDLIM2-201ENST00000265810 ADCK1Q86TW2 530 aa13.81□□□□□ -0.2
PDLIM2-201ENST00000265810 TSPAN14Q8NG11 270 aa13.81□□□□□ -0.2
PDLIM2-201ENST00000265810 RORBQ92753 470 aa13.81□□□□□ -0.2
PDLIM2-201ENST00000265810 HSH2DQ96JZ2 352 aa13.81□□□□□ -0.2
PDLIM2-201ENST00000265810 SMAD5Q99717 465 aaKnown RBP13.81□□□□□ -0.2
PDLIM2-201ENST00000265810 PNPLA3Q9NST1 481 aa13.81□□□□□ -0.2
PDLIM2-201ENST00000265810 USE1Q9NZ43 259 aa13.81□□□□□ -0.2
PDLIM2-201ENST00000265810 NDUFA13Q9P0J0 144 aa13.81□□□□□ -0.2
PDLIM2-201ENST00000265810 PCDHGA7Q9Y5G6 932 aa13.81□□□□□ -0.2
PDLIM2-201ENST00000265810 CNTRLQ7Z7A1 2325 aa13.81□□□□□ -0.2
PDLIM2-201ENST00000265810 MAP1BP46821 2468 aaKnown RBP13.81□□□□□ -0.2
PDLIM2-201ENST00000265810 H0YIV9 168 aa13.81□□□□□ -0.2
PDLIM2-201ENST00000265810 CLEC3AO75596 197 aa13.81□□□□□ -0.2
PDLIM2-201ENST00000265810 OR12D1P0DN82 309 aa13.81□□□□□ -0.2
PDLIM2-201ENST00000265810 CTSKP43235 329 aa13.81□□□□□ -0.2
PDLIM2-201ENST00000265810 AFF3P51826 1226 aaKnown RBP13.81□□□□□ -0.2
PDLIM2-201ENST00000265810 NUP107P57740 925 aa13.81□□□□□ -0.2
PDLIM2-201ENST00000265810 GPR18Q14330 331 aa13.81□□□□□ -0.2
PDLIM2-201ENST00000265810 ZNF311Q5JNZ3 666 aa13.81□□□□□ -0.2
PDLIM2-201ENST00000265810 TMEM164Q5U3C3 297 aa13.81□□□□□ -0.2
PDLIM2-201ENST00000265810 FAM91A1Q658Y4 838 aa13.81□□□□□ -0.2
PDLIM2-201ENST00000265810 C6orf120Q7Z4R8 191 aa13.81□□□□□ -0.2
PDLIM2-201ENST00000265810 DEPDC4Q8N2C3 294 aa13.81□□□□□ -0.2
PDLIM2-201ENST00000265810 PIK3C3Q8NEB9 887 aa13.81□□□□□ -0.2
PDLIM2-201ENST00000265810 ZUFSPQ96AP4 578 aa13.81□□□□□ -0.2
PDLIM2-201ENST00000265810 DGCR6LQ9BY27 220 aa13.81□□□□□ -0.2
PDLIM2-201ENST00000265810 TUBB1Q9H4B7 451 aa13.81□□□□□ -0.2
PDLIM2-201ENST00000265810 MICAL3Q7RTP6 2002 aa13.81□□□□□ -0.2
PDLIM2-201ENST00000265810 SAGP10523 405 aaPredicted RBP13.81□□□□□ -0.2
PDLIM2-201ENST00000265810 TYW3Q6IPR3 259 aaKnown RBP13.81□□□□□ -0.2
PDLIM2-201ENST00000265810 REEP3Q6NUK4 255 aa13.81□□□□□ -0.2
PDLIM2-201ENST00000265810 TMEM107Q6UX40 140 aa13.81□□□□□ -0.2
PDLIM2-201ENST00000265810 ACOT4Q8N9L9 421 aa13.81□□□□□ -0.2
PDLIM2-201ENST00000265810 ZNF540Q8NDQ6 660 aa13.81□□□□□ -0.2
PDLIM2-201ENST00000265810 OR2L5Q8NG80 312 aa13.81□□□□□ -0.2
PDLIM2-201ENST00000265810 CCL4L1Q8NHW4 92 aa13.81□□□□□ -0.2
PDLIM2-201ENST00000265810 TEX47Q8TBZ9 253 aa13.81□□□□□ -0.2
PDLIM2-201ENST00000265810 PEX11GQ96HA9 241 aa13.81□□□□□ -0.2
PDLIM2-201ENST00000265810 SLC35C2Q9NQQ7 365 aa13.81□□□□□ -0.2
PDLIM2-201ENST00000265810 C8orf4Q9NR00 106 aa13.81□□□□□ -0.2
PDLIM2-201ENST00000265810 ZSCAN32Q9NX65 697 aa13.81□□□□□ -0.2
PDLIM2-201ENST00000265810 A0A1B0GVT2 93 aa13.81□□□□□ -0.2
PDLIM2-201ENST00000265810 TNFRSF10CO14798 259 aa13.81□□□□□ -0.2
PDLIM2-201ENST00000265810 AGR2O95994 175 aa13.81□□□□□ -0.2
PDLIM2-201ENST00000265810 ZNF888P0CJ79 500 aaPredicted RBP13.81□□□□□ -0.2
PDLIM2-201ENST00000265810 HTR1EP28566 365 aa13.81□□□□□ -0.2
PDLIM2-201ENST00000265810 ARRB2P32121 409 aa13.81□□□□□ -0.2
PDLIM2-201ENST00000265810 GUCA1AP43080 201 aaPredicted RBP13.81□□□□□ -0.2
PDLIM2-201ENST00000265810 CAPZA2P47755 286 aa13.81□□□□□ -0.2
PDLIM2-201ENST00000265810 C1DQ13901 141 aaKnown RBP13.81□□□□□ -0.2
PDLIM2-201ENST00000265810 CDKN3Q16667 212 aa13.81□□□□□ -0.2
PDLIM2-201ENST00000265810 GGTA1PQ4G0N0 100 aa13.81□□□□□ -0.2
PDLIM2-201ENST00000265810 PIGGQ5H8A4 983 aa13.81□□□□□ -0.2
PDLIM2-201ENST00000265810 VAPAQ9P0L0 249 aa13.81□□□□□ -0.2
PDLIM2-201ENST00000265810 TSPAN11A1L157 253 aa13.8□□□□□ -0.2
PDLIM2-201ENST00000265810 TARM1B6A8C7 271 aa13.8□□□□□ -0.2
PDLIM2-201ENST00000265810 COL9A1P20849 921 aa13.8□□□□□ -0.2
PDLIM2-201ENST00000265810 DRD3P35462 400 aa13.8□□□□□ -0.2
PDLIM2-201ENST00000265810 PSMD4P55036 377 aaKnown RBP13.8□□□□□ -0.2
PDLIM2-201ENST00000265810 DGCR6Q14129 220 aa13.8□□□□□ -0.2
PDLIM2-201ENST00000265810 ZNF423Q2M1K9 1284 aa13.8□□□□□ -0.2
PDLIM2-201ENST00000265810 SPATS1Q496A3 300 aa13.8□□□□□ -0.2
PDLIM2-201ENST00000265810 CYP27C1Q4G0S4 372 aa13.8□□□□□ -0.2
PDLIM2-201ENST00000265810 CYBRD1Q53TN4 286 aa13.8□□□□□ -0.2
PDLIM2-201ENST00000265810 TMEM92Q6UXU6 159 aa13.8□□□□□ -0.2
PDLIM2-201ENST00000265810 RANBP3LQ86VV4 465 aaPredicted RBP13.8□□□□□ -0.2
PDLIM2-201ENST00000265810 FAM174AQ8TBP5 190 aa13.8□□□□□ -0.2
PDLIM2-201ENST00000265810 TMBIM1Q969X1 311 aa13.8□□□□□ -0.2
PDLIM2-201ENST00000265810 CIDECQ96AQ7 238 aaPredicted RBP13.8□□□□□ -0.2
PDLIM2-201ENST00000265810 GIN1Q9NXP7 522 aa13.8□□□□□ -0.2
PDLIM2-201ENST00000265810 FTSJ1Q9UET6 329 aa13.8□□□□□ -0.2
PDLIM2-201ENST00000265810 WDR81Q562E7 1941 aa13.8□□□□□ -0.2
PDLIM2-201ENST00000265810 K7EQS6 105 aa13.8□□□□□ -0.2
PDLIM2-201ENST00000265810 COQ9O75208 318 aa13.8□□□□□ -0.2
PDLIM2-201ENST00000265810 CCNB2O95067 398 aa13.8□□□□□ -0.2
PDLIM2-201ENST00000265810 GRM7Q14831 915 aa13.8□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms