RNA–Protein interactions for RNA: ENST00000264012.8

CDH3-201, Transcript of cadherin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDH3, Length 4,929 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH3-201ENST00000264012 PIM1P11309 404 aaPredicted RBP13.43□□□□□ -0.26
CDH3-201ENST00000264012 POU6F2P78424 691 aaPredicted RBP13.43□□□□□ -0.26
CDH3-201ENST00000264012 ADAM17P78536 824 aa13.43□□□□□ -0.26
CDH3-201ENST00000264012 VLDLRP98155 873 aa13.43□□□□□ -0.26
CDH3-201ENST00000264012 PON3Q15166 354 aa13.43□□□□□ -0.26
CDH3-201ENST00000264012 PIGGQ5H8A4 983 aa13.43□□□□□ -0.26
CDH3-201ENST00000264012 GAL3ST1Q99999 423 aa13.43□□□□□ -0.26
CDH3-201ENST00000264012 MOV10Q9HCE1 1003 aaKnown RBP13.43□□□□□ -0.26
CDH3-201ENST00000264012 NHSL1Q5SYE7 1610 aa13.43□□□□□ -0.26
CDH3-201ENST00000264012 C1orf226A1L170 272 aa13.43□□□□□ -0.26
CDH3-201ENST00000264012 TRIM3O75382 744 aaPredicted RBP13.43□□□□□ -0.26
CDH3-201ENST00000264012 ZNF821O75541 412 aaPredicted RBP13.43□□□□□ -0.26
CDH3-201ENST00000264012 RASAL1O95294 804 aa13.43□□□□□ -0.26
CDH3-201ENST00000264012 RAB28P51157 221 aa13.43□□□□□ -0.26
CDH3-201ENST00000264012 OR13J1Q8NGT2 312 aa13.43□□□□□ -0.26
CDH3-201ENST00000264012 PUM2Q8TB72 1066 aaKnown RBP eCLIP13.43□□□□□ -0.26
CDH3-201ENST00000264012 SLC39A13Q96H72 371 aa13.43□□□□□ -0.26
CDH3-201ENST00000264012 TOX2Q96NM4 488 aa13.43□□□□□ -0.26
CDH3-201ENST00000264012 BHLHE41Q9C0J9 482 aaPredicted RBP13.43□□□□□ -0.26
CDH3-201ENST00000264012 SDR39U1Q9NRG7 319 aaPredicted RBP13.43□□□□□ -0.26
CDH3-201ENST00000264012 NLGN3Q9NZ94 848 aa13.43□□□□□ -0.26
CDH3-201ENST00000264012 ZNF221Q9UK13 617 aa13.43□□□□□ -0.26
CDH3-201ENST00000264012 SLX4Q8IY92 1834 aa13.43□□□□□ -0.26
CDH3-201ENST00000264012 E7EQ34 232 aa13.43□□□□□ -0.26
CDH3-201ENST00000264012 HSD17B1P14061 328 aa13.43□□□□□ -0.26
CDH3-201ENST00000264012 CAPN3P20807 821 aa13.43□□□□□ -0.26
CDH3-201ENST00000264012 RGRP47804 291 aa13.43□□□□□ -0.26
CDH3-201ENST00000264012 TXNL4AP83876 142 aaKnown RBP13.43□□□□□ -0.26
CDH3-201ENST00000264012 C6orf120Q7Z4R8 191 aa13.43□□□□□ -0.26
CDH3-201ENST00000264012 GALNT7Q86SF2 657 aa13.43□□□□□ -0.26
CDH3-201ENST00000264012 METTL27Q8N6F8 245 aaPredicted RBP13.43□□□□□ -0.26
CDH3-201ENST00000264012 NUP43Q8NFH3 380 aa13.43□□□□□ -0.26
CDH3-201ENST00000264012 ITFG2Q969R8 447 aa13.43□□□□□ -0.26
CDH3-201ENST00000264012 NECTIN4Q96NY8 510 aa13.43□□□□□ -0.26
CDH3-201ENST00000264012 PRTFDC1Q9NRG1 225 aa13.43□□□□□ -0.26
CDH3-201ENST00000264012 COL18A1P39060 1754 aa13.42□□□□□ -0.26
CDH3-201ENST00000264012 NPC1O15118 1278 aa13.42□□□□□ -0.26
CDH3-201ENST00000264012 SCAMP2O15127 329 aaKnown RBP13.42□□□□□ -0.26
CDH3-201ENST00000264012 CDC123O75794 336 aaPredicted RBP13.42□□□□□ -0.26
CDH3-201ENST00000264012 FHP07954 510 aa13.42□□□□□ -0.26
CDH3-201ENST00000264012 GCAP28676 217 aa13.42□□□□□ -0.26
CDH3-201ENST00000264012 S100GP29377 79 aa13.42□□□□□ -0.26
CDH3-201ENST00000264012 DSC1Q08554 894 aa13.42□□□□□ -0.26
CDH3-201ENST00000264012 TMEM164Q5U3C3 297 aa13.42□□□□□ -0.26
CDH3-201ENST00000264012 DRAXINQ8NBI3 349 aaPredicted RBP13.42□□□□□ -0.26
CDH3-201ENST00000264012 GOLM1Q8NBJ4 401 aa13.42□□□□□ -0.26
CDH3-201ENST00000264012 HDAC2Q92769 488 aaKnown RBP13.42□□□□□ -0.26
CDH3-201ENST00000264012 TSACCQ96A04 125 aaPredicted RBP13.42□□□□□ -0.26
CDH3-201ENST00000264012 PAK6Q9NQU5 681 aaPredicted RBP13.42□□□□□ -0.26
CDH3-201ENST00000264012 KLRF1Q9NZS2 232 aa13.42□□□□□ -0.26
CDH3-201ENST00000264012 MARK1Q9P0L2 795 aa13.42□□□□□ -0.26
CDH3-201ENST00000264012 EMC8O43402 210 aa13.42□□□□□ -0.26
CDH3-201ENST00000264012 PTNP21246 168 aa13.42□□□□□ -0.26
CDH3-201ENST00000264012 ZNF542PQ5EBM4 170 aa13.42□□□□□ -0.26
CDH3-201ENST00000264012 TPRG1LQ5T0D9 272 aa13.42□□□□□ -0.26
CDH3-201ENST00000264012 CLECL1Q8IZS7 167 aa13.42□□□□□ -0.26
CDH3-201ENST00000264012 ISG20Q96AZ6 181 aaKnown RBP13.42□□□□□ -0.26
CDH3-201ENST00000264012 C12orf43Q96C57 262 aaKnown RBP13.42□□□□□ -0.26
CDH3-201ENST00000264012 LGR4Q9BXB1 951 aa13.42□□□□□ -0.26
CDH3-201ENST00000264012 ACSL6Q9UKU0 697 aa13.42□□□□□ -0.26
CDH3-201ENST00000264012 EMCNQ9ULC0 261 aa13.42□□□□□ -0.26
CDH3-201ENST00000264012 TMEM5Q9Y2B1 443 aa13.42□□□□□ -0.26
CDH3-201ENST00000264012 IFT52Q9Y366 437 aa13.42□□□□□ -0.26
CDH3-201ENST00000264012 ZNF726A6NNF4 738 aa13.42□□□□□ -0.26
CDH3-201ENST00000264012 GRXCR1A8MXD5 290 aa13.42□□□□□ -0.26
CDH3-201ENST00000264012 PABPC4LP0CB38 370 aaKnown RBP13.42□□□□□ -0.26
CDH3-201ENST00000264012 CEBPBP17676 345 aa13.42□□□□□ -0.26
CDH3-201ENST00000264012 ELK4P28324 431 aa13.42□□□□□ -0.26
CDH3-201ENST00000264012 FOXA1P55317 472 aa13.42□□□□□ -0.26
CDH3-201ENST00000264012 RPS26P62854 115 aaKnown RBP13.42□□□□□ -0.26
CDH3-201ENST00000264012 CD47Q08722 323 aa13.42□□□□□ -0.26
CDH3-201ENST00000264012 GINS1Q14691 196 aa13.42□□□□□ -0.26
CDH3-201ENST00000264012 TYSND1Q2T9J0 566 aa13.42□□□□□ -0.26
CDH3-201ENST00000264012 TMEM35AQ53FP2 167 aa13.42□□□□□ -0.26
CDH3-201ENST00000264012 PAMR1Q6UXH9 720 aa13.42□□□□□ -0.26
CDH3-201ENST00000264012 ZDHHC12Q96GR4 267 aa13.42□□□□□ -0.26
CDH3-201ENST00000264012 PIP5K1AQ99755 562 aa13.42□□□□□ -0.26
CDH3-201ENST00000264012 TRIM36Q9NQ86 728 aa13.42□□□□□ -0.26
CDH3-201ENST00000264012 ST6GALNAC1Q9NSC7 600 aaPredicted RBP13.42□□□□□ -0.26
CDH3-201ENST00000264012 CENPMQ9NSP4 180 aa13.42□□□□□ -0.26
CDH3-201ENST00000264012 LIPT1Q9Y234 373 aa13.42□□□□□ -0.26
CDH3-201ENST00000264012 NME4O00746 187 aa13.42□□□□□ -0.26
CDH3-201ENST00000264012 LATO43561 262 aa13.42□□□□□ -0.26
CDH3-201ENST00000264012 LAMP1P11279 417 aa13.42□□□□□ -0.26
CDH3-201ENST00000264012 MLLT1Q03111 559 aaPredicted RBP13.42□□□□□ -0.26
CDH3-201ENST00000264012 INAVAQ3KP66 663 aa13.42□□□□□ -0.26
CDH3-201ENST00000264012 FLYWCH1Q4VC44 716 aa13.42□□□□□ -0.26
CDH3-201ENST00000264012 NIPAL1Q6NVV3 410 aa13.42□□□□□ -0.26
CDH3-201ENST00000264012 COMMD6Q7Z4G1 85 aa13.42□□□□□ -0.26
CDH3-201ENST00000264012 OR5M3Q8NGP4 307 aa13.42□□□□□ -0.26
CDH3-201ENST00000264012 FBXO27Q8NI29 283 aa13.42□□□□□ -0.26
CDH3-201ENST00000264012 OSTF1Q92882 214 aa13.42□□□□□ -0.26
CDH3-201ENST00000264012 APIPQ96GX9 242 aa13.42□□□□□ -0.26
CDH3-201ENST00000264012 GFM1Q96RP9 751 aaKnown RBP13.42□□□□□ -0.26
CDH3-201ENST00000264012 SPATA9Q9BWV2 254 aa13.42□□□□□ -0.26
CDH3-201ENST00000264012 MED28Q9H204 178 aa13.42□□□□□ -0.26
CDH3-201ENST00000264012 PREBQ9HCU5 417 aa13.42□□□□□ -0.26
CDH3-201ENST00000264012 SDHAF3Q9NRP4 125 aa13.42□□□□□ -0.26
CDH3-201ENST00000264012 TBCCD1Q9NVR7 557 aa13.42□□□□□ -0.26
CDH3-201ENST00000264012 ZNF451Q9Y4E5 1061 aa13.42□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms