RNA–Protein interactions for RNA: ENST00000263780.8

CHMP2B-201, Transcript of charged multivesicular body protein 2B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHMP2B, Length 2,557 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2B-201ENST00000263780 YY2O15391 372 aa11.86□□□□□ -0.51
CHMP2B-201ENST00000263780 TEX28O15482 410 aa11.86□□□□□ -0.51
CHMP2B-201ENST00000263780 TNFRSF21O75509 655 aa11.86□□□□□ -0.51
CHMP2B-201ENST00000263780 GASTP01350 101 aa11.86□□□□□ -0.51
CHMP2B-201ENST00000263780 IFNW1P05000 195 aa11.86□□□□□ -0.51
CHMP2B-201ENST00000263780 GSTM1P09488 218 aa11.86□□□□□ -0.51
CHMP2B-201ENST00000263780 MPC1LP0DKB6 136 aa11.86□□□□□ -0.51
CHMP2B-201ENST00000263780 CPEP16870 476 aa11.86□□□□□ -0.51
CHMP2B-201ENST00000263780 TNFRSF1BP20333 461 aa11.86□□□□□ -0.51
CHMP2B-201ENST00000263780 SPAM1P38567 509 aa11.86□□□□□ -0.51
CHMP2B-201ENST00000263780 MAPK12P53778 367 aa11.86□□□□□ -0.51
CHMP2B-201ENST00000263780 BEX3Q00994 111 aa11.86□□□□□ -0.51
CHMP2B-201ENST00000263780 TAGLNQ01995 201 aaKnown RBP11.86□□□□□ -0.51
CHMP2B-201ENST00000263780 SF3A2Q15428 464 aaKnown RBP11.86□□□□□ -0.51
CHMP2B-201ENST00000263780 OCLNQ16625 522 aa11.86□□□□□ -0.51
CHMP2B-201ENST00000263780 LAPTM4BQ86VI4 370 aa11.86□□□□□ -0.51
CHMP2B-201ENST00000263780 LAS2Q8IYD9 372 aa11.86□□□□□ -0.51
CHMP2B-201ENST00000263780 CBARPQ8N350 705 aaPredicted RBP11.86□□□□□ -0.51
CHMP2B-201ENST00000263780 Q8N402 240 aa11.86□□□□□ -0.51
CHMP2B-201ENST00000263780 B3GALT6Q96L58 329 aa11.86□□□□□ -0.51
CHMP2B-201ENST00000263780 IL4I1Q96RQ9 567 aa11.86□□□□□ -0.51
CHMP2B-201ENST00000263780 NELL2Q99435 816 aa11.86□□□□□ -0.51
CHMP2B-201ENST00000263780 MARVELD1Q9BSK0 173 aa11.86□□□□□ -0.51
CHMP2B-201ENST00000263780 BHLHE41Q9C0J9 482 aaPredicted RBP11.86□□□□□ -0.51
CHMP2B-201ENST00000263780 CCSER2Q9H7U1 834 aa11.86□□□□□ -0.51
CHMP2B-201ENST00000263780 NMNAT1Q9HAN9 279 aaPredicted RBP11.86□□□□□ -0.51
CHMP2B-201ENST00000263780 BRF2Q9HAW0 419 aa11.86□□□□□ -0.51
CHMP2B-201ENST00000263780 CLEC2DQ9UHP7 191 aa11.86□□□□□ -0.51
CHMP2B-201ENST00000263780 ING4Q9UNL4 249 aa11.86□□□□□ -0.51
CHMP2B-201ENST00000263780 TTC3P53804 2025 aa11.86□□□□□ -0.51
CHMP2B-201ENST00000263780 TRIP12Q14669 1992 aaPredicted RBP11.86□□□□□ -0.51
CHMP2B-201ENST00000263780 DSPPQ9NZW4 1301 aa11.85□□□□□ -0.51
CHMP2B-201ENST00000263780 IRGMA1A4Y4 181 aa11.85□□□□□ -0.51
CHMP2B-201ENST00000263780 LINC00862A6NCI5 91 aa11.85□□□□□ -0.51
CHMP2B-201ENST00000263780 FHP07954 510 aa11.85□□□□□ -0.51
CHMP2B-201ENST00000263780 ZDHHC11BP0C7U3 371 aa11.85□□□□□ -0.51
CHMP2B-201ENST00000263780 HLA-FP30511 346 aa11.85□□□□□ -0.51
CHMP2B-201ENST00000263780 ATP5C1P36542 298 aaKnown RBP11.85□□□□□ -0.51
CHMP2B-201ENST00000263780 HOXC5Q00444 222 aa11.85□□□□□ -0.51
CHMP2B-201ENST00000263780 CDK6Q00534 326 aa11.85□□□□□ -0.51
CHMP2B-201ENST00000263780 HSPA14Q0VDF9 509 aa11.85□□□□□ -0.51
CHMP2B-201ENST00000263780 KCNC3Q14003 757 aa11.85□□□□□ -0.51
CHMP2B-201ENST00000263780 ZNF648Q5T619 568 aaPredicted RBP11.85□□□□□ -0.51
CHMP2B-201ENST00000263780 LIPKQ5VXJ0 399 aa11.85□□□□□ -0.51
CHMP2B-201ENST00000263780 USP30Q70CQ3 517 aa11.85□□□□□ -0.51
CHMP2B-201ENST00000263780 NLGN4YQ8NFZ3 816 aaPredicted RBP11.85□□□□□ -0.51
CHMP2B-201ENST00000263780 GOT1L1Q8NHS2 421 aaPredicted RBP11.85□□□□□ -0.51
CHMP2B-201ENST00000263780 AKAP1Q92667 903 aaKnown RBP eCLIP11.85□□□□□ -0.51
CHMP2B-201ENST00000263780 FAM193BQ96PV7 902 aaPredicted RBP11.85□□□□□ -0.51
CHMP2B-201ENST00000263780 FOLH1BQ9HBA9 442 aa11.85□□□□□ -0.51
CHMP2B-201ENST00000263780 GPBP1L1Q9HC44 474 aaPredicted RBP11.85□□□□□ -0.51
CHMP2B-201ENST00000263780 ISYNA1Q9NPH2 558 aa11.85□□□□□ -0.51
CHMP2B-201ENST00000263780 LHX3Q9UBR4 397 aa11.85□□□□□ -0.51
CHMP2B-201ENST00000263780 MOSPD1Q9UJG1 213 aa11.85□□□□□ -0.51
CHMP2B-201ENST00000263780 ADAM30Q9UKF2 790 aa11.85□□□□□ -0.51
CHMP2B-201ENST00000263780 PADI3Q9ULW8 664 aa11.85□□□□□ -0.51
CHMP2B-201ENST00000263780 SLC6A14Q9UN76 642 aa11.85□□□□□ -0.51
CHMP2B-201ENST00000263780 ANGPT4Q9Y264 503 aa11.85□□□□□ -0.51
CHMP2B-201ENST00000263780 SLC22A14Q9Y267 594 aa11.85□□□□□ -0.51
CHMP2B-201ENST00000263780 ASB4Q9Y574 426 aa11.85□□□□□ -0.51
CHMP2B-201ENST00000263780 SNX11Q9Y5W9 270 aa11.85□□□□□ -0.51
CHMP2B-201ENST00000263780 OR5K3A6NET4 321 aa11.85□□□□□ -0.51
CHMP2B-201ENST00000263780 OR6C75A6NL08 312 aa11.85□□□□□ -0.51
CHMP2B-201ENST00000263780 TMEM189-UBE2V1I3L0A0 370 aa11.85□□□□□ -0.51
CHMP2B-201ENST00000263780 SLC30A4O14863 429 aa11.85□□□□□ -0.51
CHMP2B-201ENST00000263780 LYRM1O43325 122 aa11.85□□□□□ -0.51
CHMP2B-201ENST00000263780 RFPL3O75679 317 aa11.85□□□□□ -0.51
CHMP2B-201ENST00000263780 ANXA4P09525 319 aaPredicted RBP11.85□□□□□ -0.51
CHMP2B-201ENST00000263780 ALPIP09923 528 aa11.85□□□□□ -0.51
CHMP2B-201ENST00000263780 GAB1Q13480 694 aa11.85□□□□□ -0.51
CHMP2B-201ENST00000263780 CHRNA6Q15825 494 aa11.85□□□□□ -0.51
CHMP2B-201ENST00000263780 PLK5Q496M5 336 aa11.85□□□□□ -0.51
CHMP2B-201ENST00000263780 EEF1AKMT2Q5JPI9 291 aaKnown RBP11.85□□□□□ -0.51
CHMP2B-201ENST00000263780 ZNF730Q6ZMV8 503 aa11.85□□□□□ -0.51
CHMP2B-201ENST00000263780 ATAD1Q8NBU5 361 aa11.85□□□□□ -0.51
CHMP2B-201ENST00000263780 PLA2G15Q8NCC3 412 aa11.85□□□□□ -0.51
CHMP2B-201ENST00000263780 ATP6V1C2Q8NEY4 427 aa11.85□□□□□ -0.51
CHMP2B-201ENST00000263780 NFKBIDQ8NI38 313 aa11.85□□□□□ -0.51
CHMP2B-201ENST00000263780 LRRC20Q8TCA0 184 aa11.85□□□□□ -0.51
CHMP2B-201ENST00000263780 SKA2Q8WVK7 121 aaPredicted RBP11.85□□□□□ -0.51
CHMP2B-201ENST00000263780 ASB11Q8WXH4 323 aa11.85□□□□□ -0.51
CHMP2B-201ENST00000263780 TRMT61AQ96FX7 289 aaKnown RBP11.85□□□□□ -0.51
CHMP2B-201ENST00000263780 QRFPRQ96P65 431 aa11.85□□□□□ -0.51
CHMP2B-201ENST00000263780 TSSK6Q9BXA6 273 aa11.85□□□□□ -0.51
CHMP2B-201ENST00000263780 ZDHHC3Q9NYG2 299 aa11.85□□□□□ -0.51
CHMP2B-201ENST00000263780 GLTPQ9NZD2 209 aa11.85□□□□□ -0.51
CHMP2B-201ENST00000263780 HCN2Q9UL51 889 aa11.85□□□□□ -0.51
CHMP2B-201ENST00000263780 RAB23Q9ULC3 237 aa11.85□□□□□ -0.51
CHMP2B-201ENST00000263780 NDRG2Q9UN36 371 aaKnown RBP11.85□□□□□ -0.51
CHMP2B-201ENST00000263780 DIMT1Q9UNQ2 313 aaKnown RBP11.85□□□□□ -0.51
CHMP2B-201ENST00000263780 CHD5Q8TDI0 1954 aa11.85□□□□□ -0.51
CHMP2B-201ENST00000263780 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP11.84□□□□□ -0.51
CHMP2B-201ENST00000263780 PITPNM1O00562 1244 aa11.84□□□□□ -0.51
CHMP2B-201ENST00000263780 PLD2O14939 933 aa11.84□□□□□ -0.51
CHMP2B-201ENST00000263780 SYN3O14994 580 aa11.84□□□□□ -0.51
CHMP2B-201ENST00000263780 AKR7A2O43488 359 aa11.84□□□□□ -0.51
CHMP2B-201ENST00000263780 PRAMEF12O95522 483 aa11.84□□□□□ -0.51
CHMP2B-201ENST00000263780 RAB36O95755 333 aa11.84□□□□□ -0.51
CHMP2B-201ENST00000263780 HBQ1P09105 142 aa11.84□□□□□ -0.51
CHMP2B-201ENST00000263780 OR56A5P0C7T3 313 aa11.84□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms