RNA–Protein interactions for RNA: ENST00000263121.11

SMARCB1-201, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SMARCB1, Length 1,690 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1-201ENST00000263121 TAS2R7Q9NYW3 318 aa21.71■■□□□ 1.07
SMARCB1-201ENST00000263121 EHD3Q9NZN3 535 aa21.71■■□□□ 1.07
SMARCB1-201ENST00000263121 MRPS2Q9Y399 296 aaKnown RBP21.71■■□□□ 1.07
SMARCB1-201ENST00000263121 ATG4BQ9Y4P1 393 aa21.71■■□□□ 1.07
SMARCB1-201ENST00000263121 MN1Q10571 1320 aaPredicted RBP21.7■■□□□ 1.06
SMARCB1-201ENST00000263121 A0A1W2PR48 441 aa21.7■■□□□ 1.06
SMARCB1-201ENST00000263121 EPN2O95208 641 aa21.7■■□□□ 1.06
SMARCB1-201ENST00000263121 SYPP08247 313 aa21.7■■□□□ 1.06
SMARCB1-201ENST00000263121 ALOX12P18054 663 aa21.7■■□□□ 1.06
SMARCB1-201ENST00000263121 CD1CP29017 333 aa21.7■■□□□ 1.06
SMARCB1-201ENST00000263121 SPRED1Q7Z699 444 aa21.7■■□□□ 1.06
SMARCB1-201ENST00000263121 PTRH1Q86Y79 214 aaKnown RBP21.7■■□□□ 1.06
SMARCB1-201ENST00000263121 ARHGEF39Q8N4T4 335 aa21.7■■□□□ 1.06
SMARCB1-201ENST00000263121 ENDOVQ8N8Q3 282 aaKnown RBP21.7■■□□□ 1.06
SMARCB1-201ENST00000263121 Q8N9G6 341 aaPredicted RBP21.7■■□□□ 1.06
SMARCB1-201ENST00000263121 BHLHE22Q8NFJ8 381 aaPredicted RBP21.7■■□□□ 1.06
SMARCB1-201ENST00000263121 LOXL4Q96JB6 756 aa21.7■■□□□ 1.06
SMARCB1-201ENST00000263121 SERINC2Q96SA4 455 aa21.7■■□□□ 1.06
SMARCB1-201ENST00000263121 THUMPD3Q9BV44 507 aaKnown RBP21.7■■□□□ 1.06
SMARCB1-201ENST00000263121 NLNQ9BYT8 704 aa21.7■■□□□ 1.06
SMARCB1-201ENST00000263121 GMEB1Q9Y692 573 aa21.7■■□□□ 1.06
SMARCB1-201ENST00000263121 C1orf226A1L170 272 aa21.69■■□□□ 1.06
SMARCB1-201ENST00000263121 SRPX2O60687 465 aaPredicted RBP21.69■■□□□ 1.06
SMARCB1-201ENST00000263121 HTR1EP28566 365 aa21.69■■□□□ 1.06
SMARCB1-201ENST00000263121 CSF2RBP32927 897 aa21.69■■□□□ 1.06
SMARCB1-201ENST00000263121 FRKP42685 505 aaPredicted RBP21.69■■□□□ 1.06
SMARCB1-201ENST00000263121 DEFB134Q4QY38 66 aa21.69■■□□□ 1.06
SMARCB1-201ENST00000263121 ZNF621Q6ZSS3 439 aa21.69■■□□□ 1.06
SMARCB1-201ENST00000263121 PLXDC1Q8IUK5 500 aa21.69■■□□□ 1.06
SMARCB1-201ENST00000263121 HIPK4Q8NE63 616 aa21.69■■□□□ 1.06
SMARCB1-201ENST00000263121 OR4A15Q8NGL6 344 aa21.69■■□□□ 1.06
SMARCB1-201ENST00000263121 UCN3Q969E3 161 aa21.69■■□□□ 1.06
SMARCB1-201ENST00000263121 ZNF583Q96ND8 569 aa21.69■■□□□ 1.06
SMARCB1-201ENST00000263121 ZNF285Q96NJ3 590 aa21.69■■□□□ 1.06
SMARCB1-201ENST00000263121 ECSITQ9BQ95 431 aa21.69■■□□□ 1.06
SMARCB1-201ENST00000263121 MUC13Q9H3R2 512 aa21.69■■□□□ 1.06
SMARCB1-201ENST00000263121 KAT8Q9H7Z6 458 aaKnown RBP21.69■■□□□ 1.06
SMARCB1-201ENST00000263121 SLC22A7Q9Y694 548 aa21.69■■□□□ 1.06
SMARCB1-201ENST00000263121 CABIN1Q9Y6J0 2220 aa21.69■■□□□ 1.06
SMARCB1-201ENST00000263121 GOLGA4Q13439 2230 aaKnown RBP21.69■■□□□ 1.06
SMARCB1-201ENST00000263121 PROM1O43490 865 aa21.69■■□□□ 1.06
SMARCB1-201ENST00000263121 FKBP6O75344 327 aa21.69■■□□□ 1.06
SMARCB1-201ENST00000263121 AIFM1O95831 613 aa21.69■■□□□ 1.06
SMARCB1-201ENST00000263121 C6orf47O95873 294 aa21.69■■□□□ 1.06
SMARCB1-201ENST00000263121 CTSBP07858 339 aa21.69■■□□□ 1.06
SMARCB1-201ENST00000263121 ZNF10P21506 573 aaPredicted RBP21.69■■□□□ 1.06
SMARCB1-201ENST00000263121 MPLP40238 635 aa21.69■■□□□ 1.06
SMARCB1-201ENST00000263121 MLLT3P42568 568 aaPredicted RBP21.69■■□□□ 1.06
SMARCB1-201ENST00000263121 ATXN3P54252 364 aaPredicted RBP21.69■■□□□ 1.06
SMARCB1-201ENST00000263121 HBA1P69905 142 aa21.69■■□□□ 1.06
SMARCB1-201ENST00000263121 PRTGQ2VWP7 1150 aa21.69■■□□□ 1.06
SMARCB1-201ENST00000263121 AMZ1Q400G9 498 aa21.69■■□□□ 1.06
SMARCB1-201ENST00000263121 AAGABQ6PD74 315 aa21.69■■□□□ 1.06
SMARCB1-201ENST00000263121 GPR155Q7Z3F1 870 aa21.69■■□□□ 1.06
SMARCB1-201ENST00000263121 IFNEQ86WN2 208 aa21.69■■□□□ 1.06
SMARCB1-201ENST00000263121 KLHL6Q8WZ60 621 aa21.69■■□□□ 1.06
SMARCB1-201ENST00000263121 MAPKAP1Q9BPZ7 522 aa21.69■■□□□ 1.06
SMARCB1-201ENST00000263121 SEMA5BQ9P283 1151 aa21.69■■□□□ 1.06
SMARCB1-201ENST00000263121 C5AR2Q9P296 337 aa21.69■■□□□ 1.06
SMARCB1-201ENST00000263121 NKX1-2Q9UD57 310 aaPredicted RBP21.69■■□□□ 1.06
SMARCB1-201ENST00000263121 FBXW2Q9UKT8 454 aa21.69■■□□□ 1.06
SMARCB1-201ENST00000263121 VPS4AQ9UN37 437 aa21.69■■□□□ 1.06
SMARCB1-201ENST00000263121 USP22Q9UPT9 525 aa21.69■■□□□ 1.06
SMARCB1-201ENST00000263121 A0A1W2PRB8 838 aa21.68■■□□□ 1.06
SMARCB1-201ENST00000263121 H0Y3Z8 333 aa21.68■■□□□ 1.06
SMARCB1-201ENST00000263121 TXNDC9O14530 226 aa21.68■■□□□ 1.06
SMARCB1-201ENST00000263121 PDPK1O15530 556 aa21.68■■□□□ 1.06
SMARCB1-201ENST00000263121 PCDHGA12O60330 932 aa21.68■■□□□ 1.06
SMARCB1-201ENST00000263121 ZBTB11O95625 1053 aaPredicted RBP21.68■■□□□ 1.06
SMARCB1-201ENST00000263121 PCBP4P57723 403 aaKnown RBP21.68■■□□□ 1.06
SMARCB1-201ENST00000263121 GAB1Q13480 694 aa21.68■■□□□ 1.06
SMARCB1-201ENST00000263121 RCN1Q15293 331 aa21.68■■□□□ 1.06
SMARCB1-201ENST00000263121 GUSBP11Q6P575 273 aa21.68■■□□□ 1.06
SMARCB1-201ENST00000263121 WDR74Q6RFH5 385 aaPredicted RBP21.68■■□□□ 1.06
SMARCB1-201ENST00000263121 DHFR2Q86XF0 187 aa21.68■■□□□ 1.06
SMARCB1-201ENST00000263121 CALHM3Q86XJ0 350 aa21.68■■□□□ 1.06
SMARCB1-201ENST00000263121 SLC26A7Q8TE54 656 aa21.68■■□□□ 1.06
SMARCB1-201ENST00000263121 PDE7BQ9NP56 450 aa21.68■■□□□ 1.06
SMARCB1-201ENST00000263121 SLAMF7Q9NQ25 335 aa21.68■■□□□ 1.06
SMARCB1-201ENST00000263121 STARD5Q9NSY2 213 aa21.68■■□□□ 1.06
SMARCB1-201ENST00000263121 ACTR3BQ9P1U1 418 aa21.68■■□□□ 1.06
SMARCB1-201ENST00000263121 ZNF282Q9UDV7 671 aaPredicted RBP21.68■■□□□ 1.06
SMARCB1-201ENST00000263121 EGFL7Q9UHF1 273 aa21.68■■□□□ 1.06
SMARCB1-201ENST00000263121 GMEB2Q9UKD1 530 aa21.68■■□□□ 1.06
SMARCB1-201ENST00000263121 PLCL2Q9UPR0 1127 aa21.68■■□□□ 1.06
SMARCB1-201ENST00000263121 PCDHB3Q9Y5E6 796 aa21.68■■□□□ 1.06
SMARCB1-201ENST00000263121 FAM86C2PA6NEL3 165 aa21.67■■□□□ 1.06
SMARCB1-201ENST00000263121 CLIC1O00299 241 aa21.67■■□□□ 1.06
SMARCB1-201ENST00000263121 NVLO15381 856 aaKnown RBP21.67■■□□□ 1.06
SMARCB1-201ENST00000263121 GALR2O43603 387 aaPredicted RBP21.67■■□□□ 1.06
SMARCB1-201ENST00000263121 IL1RNP18510 177 aa21.67■■□□□ 1.06
SMARCB1-201ENST00000263121 GZMMP51124 257 aa21.67■■□□□ 1.06
SMARCB1-201ENST00000263121 OR4D2P58180 307 aa21.67■■□□□ 1.06
SMARCB1-201ENST00000263121 SLC14A1Q13336 389 aa21.67■■□□□ 1.06
SMARCB1-201ENST00000263121 CCDC6Q16204 474 aa21.67■■□□□ 1.06
SMARCB1-201ENST00000263121 EID2Q8N6I1 236 aa21.67■■□□□ 1.06
SMARCB1-201ENST00000263121 OR10A6Q8NH74 314 aa21.67■■□□□ 1.06
SMARCB1-201ENST00000263121 EXOSC8Q96B26 276 aaKnown RBP21.67■■□□□ 1.06
SMARCB1-201ENST00000263121 TRIM4Q9C037 500 aa21.67■■□□□ 1.06
SMARCB1-201ENST00000263121 S100A14Q9HCY8 104 aa21.67■■□□□ 1.06
Retrieved 100 of 20,778 RNA–protein pairs in 81.3 ms