RNA–Protein interactions for RNA: ENST00000261584.8

PALB2-201, Transcript of partner and localizer of BRCA2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PALB2, Length 4,003 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PALB2-201ENST00000261584 AGAP7PQ5VUJ5 663 aa9.7□□□□□ -0.86
PALB2-201ENST00000261584 SPRYD7Q5W111 196 aa9.7□□□□□ -0.86
PALB2-201ENST00000261584 PTRH1Q86Y79 214 aaKnown RBP9.7□□□□□ -0.86
PALB2-201ENST00000261584 RIMKLAQ8IXN7 391 aa9.7□□□□□ -0.86
PALB2-201ENST00000261584 SLC43A3Q8NBI5 491 aa9.7□□□□□ -0.86
PALB2-201ENST00000261584 OR51G2Q8NGK0 314 aa9.7□□□□□ -0.86
PALB2-201ENST00000261584 LRRC20Q8TCA0 184 aa9.7□□□□□ -0.86
PALB2-201ENST00000261584 FAM124BQ9H5Z6 455 aaPredicted RBP9.7□□□□□ -0.86
PALB2-201ENST00000261584 MRPL17Q9NRX2 175 aaKnown RBP9.7□□□□□ -0.86
PALB2-201ENST00000261584 CNIH4Q9P003 139 aa9.7□□□□□ -0.86
PALB2-201ENST00000261584 CLEC4EQ9ULY5 219 aa9.7□□□□□ -0.86
PALB2-201ENST00000261584 ZFR2Q9UPR6 939 aaKnown RBP9.7□□□□□ -0.86
PALB2-201ENST00000261584 MBLAC1A4D2B0 266 aaPredicted RBP9.69□□□□□ -0.86
PALB2-201ENST00000261584 WNT9AO14904 365 aa9.69□□□□□ -0.86
PALB2-201ENST00000261584 OR2B3O76000 313 aa9.69□□□□□ -0.86
PALB2-201ENST00000261584 HPRP00739 348 aa9.69□□□□□ -0.86
PALB2-201ENST00000261584 ZNF865P0CJ78 1059 aaPredicted RBP9.69□□□□□ -0.86
PALB2-201ENST00000261584 GRK5P34947 590 aa9.69□□□□□ -0.86
PALB2-201ENST00000261584 HMGCLP35914 325 aa9.69□□□□□ -0.86
PALB2-201ENST00000261584 CCR4P51679 360 aa9.69□□□□□ -0.86
PALB2-201ENST00000261584 CLCN7P51798 805 aa9.69□□□□□ -0.86
PALB2-201ENST00000261584 HBA1P69905 142 aa9.69□□□□□ -0.86
PALB2-201ENST00000261584 SLC14A2Q15849 920 aa9.69□□□□□ -0.86
PALB2-201ENST00000261584 PROX2Q3B8N5 592 aa9.69□□□□□ -0.86
PALB2-201ENST00000261584 WDR48Q8TAF3 677 aa9.69□□□□□ -0.86
PALB2-201ENST00000261584 F2RL3Q96RI0 385 aa9.69□□□□□ -0.86
PALB2-201ENST00000261584 NRTNQ99748 197 aa9.69□□□□□ -0.86
PALB2-201ENST00000261584 HEBP1Q9NRV9 189 aa9.69□□□□□ -0.86
PALB2-201ENST00000261584 MUTYHQ9UIF7 546 aa9.69□□□□□ -0.86
PALB2-201ENST00000261584 TMEFF2Q9UIK5 374 aaPredicted RBP9.69□□□□□ -0.86
PALB2-201ENST00000261584 PPIEQ9UNP9 301 aaKnown RBP9.69□□□□□ -0.86
PALB2-201ENST00000261584 H7BY64 318 aa9.69□□□□□ -0.86
PALB2-201ENST00000261584 PLD2O14939 933 aa9.69□□□□□ -0.86
PALB2-201ENST00000261584 DUSP11O75319 330 aaKnown RBP9.69□□□□□ -0.86
PALB2-201ENST00000261584 YES1P07947 543 aa9.69□□□□□ -0.86
PALB2-201ENST00000261584 OR12D1P0DN82 309 aa9.69□□□□□ -0.86
PALB2-201ENST00000261584 C7P10643 843 aa9.69□□□□□ -0.86
PALB2-201ENST00000261584 PRG2P13727 222 aa9.69□□□□□ -0.86
PALB2-201ENST00000261584 FGFBP1Q14512 234 aa9.69□□□□□ -0.86
PALB2-201ENST00000261584 ANXA8L1Q5VT79 327 aa9.69□□□□□ -0.86
PALB2-201ENST00000261584 AGAP6Q5VW22 663 aa9.69□□□□□ -0.86
PALB2-201ENST00000261584 BOLLQ8N9W6 283 aaKnown RBP9.69□□□□□ -0.86
PALB2-201ENST00000261584 DYNC2LI1Q8TCX1 351 aa9.69□□□□□ -0.86
PALB2-201ENST00000261584 PRAP1Q96NZ9 151 aa9.69□□□□□ -0.86
PALB2-201ENST00000261584 AGAP4Q96P64 663 aa9.69□□□□□ -0.86
PALB2-201ENST00000261584 CPPED1Q9BRF8 314 aaPredicted RBP9.69□□□□□ -0.86
PALB2-201ENST00000261584 PPIL3Q9H2H8 161 aaKnown RBP9.69□□□□□ -0.86
PALB2-201ENST00000261584 SUV39H2Q9H5I1 410 aa9.69□□□□□ -0.86
PALB2-201ENST00000261584 NMNAT1Q9HAN9 279 aaPredicted RBP9.69□□□□□ -0.86
PALB2-201ENST00000261584 TMEM39AQ9NV64 488 aa9.69□□□□□ -0.86
PALB2-201ENST00000261584 TAC3Q9UHF0 121 aa9.69□□□□□ -0.86
PALB2-201ENST00000261584 HCN4Q9Y3Q4 1203 aa9.69□□□□□ -0.86
PALB2-201ENST00000261584 OARD1Q9Y530 152 aa9.69□□□□□ -0.86
PALB2-201ENST00000261584 PSMD9O00233 223 aa9.69□□□□□ -0.86
PALB2-201ENST00000261584 ANKRD28O15084 1053 aa9.69□□□□□ -0.86
PALB2-201ENST00000261584 PRMT3O60678 531 aa9.69□□□□□ -0.86
PALB2-201ENST00000261584 KCNK5O95279 499 aa9.69□□□□□ -0.86
PALB2-201ENST00000261584 PEX11BO96011 259 aa9.69□□□□□ -0.86
PALB2-201ENST00000261584 SAGP10523 405 aaPredicted RBP9.69□□□□□ -0.86
PALB2-201ENST00000261584 CYP2A6P11509 494 aaPredicted RBP9.69□□□□□ -0.86
PALB2-201ENST00000261584 DNAJB1P25685 340 aa9.69□□□□□ -0.86
PALB2-201ENST00000261584 ACRV1P26436 265 aa9.69□□□□□ -0.86
PALB2-201ENST00000261584 RPS19P39019 145 aaKnown RBP9.69□□□□□ -0.86
PALB2-201ENST00000261584 DSTNP60981 165 aa9.69□□□□□ -0.86
PALB2-201ENST00000261584 GRSF1Q12849 480 aaKnown RBP eCLIP9.69□□□□□ -0.86
PALB2-201ENST00000261584 CRHR2Q13324 411 aa9.69□□□□□ -0.86
PALB2-201ENST00000261584 SLC5A12Q1EHB4 618 aa9.69□□□□□ -0.86
PALB2-201ENST00000261584 XKR7Q5GH72 579 aa9.69□□□□□ -0.86
PALB2-201ENST00000261584 CAPN13Q6MZZ7 669 aaPredicted RBP9.69□□□□□ -0.86
PALB2-201ENST00000261584 DNAJC5GQ8N7S2 189 aa9.69□□□□□ -0.86
PALB2-201ENST00000261584 GTF3C2Q8WUA4 911 aaPredicted RBP9.69□□□□□ -0.86
PALB2-201ENST00000261584 CLMPQ9H6B4 373 aa9.69□□□□□ -0.86
PALB2-201ENST00000261584 GORASP2Q9H8Y8 452 aa9.69□□□□□ -0.86
PALB2-201ENST00000261584 MED16Q9Y2X0 877 aa9.69□□□□□ -0.86
PALB2-201ENST00000261584 ATG2BQ96BY7 2078 aa9.69□□□□□ -0.86
PALB2-201ENST00000261584 SOX30O94993 753 aa9.68□□□□□ -0.86
PALB2-201ENST00000261584 TSPAN12O95859 305 aa9.68□□□□□ -0.86
PALB2-201ENST00000261584 GASTP01350 101 aa9.68□□□□□ -0.86
PALB2-201ENST00000261584 ATP1B2P14415 290 aaPredicted RBP9.68□□□□□ -0.86
PALB2-201ENST00000261584 MAT2AP31153 395 aaKnown RBP9.68□□□□□ -0.86
PALB2-201ENST00000261584 ACVR1BP36896 505 aa9.68□□□□□ -0.86
PALB2-201ENST00000261584 ZNF81P51508 661 aa9.68□□□□□ -0.86
PALB2-201ENST00000261584 RAB15P59190 212 aa9.68□□□□□ -0.86
PALB2-201ENST00000261584 TUBA1BP68363 451 aa9.68□□□□□ -0.86
PALB2-201ENST00000261584 TIAL1Q01085 375 aaKnown RBP eCLIP9.68□□□□□ -0.86
PALB2-201ENST00000261584 MTAPQ13126 283 aa9.68□□□□□ -0.86
PALB2-201ENST00000261584 GAB1Q13480 694 aa9.68□□□□□ -0.86
PALB2-201ENST00000261584 E2F2Q14209 437 aa9.68□□□□□ -0.86
PALB2-201ENST00000261584 RGNQ15493 299 aa9.68□□□□□ -0.86
PALB2-201ENST00000261584 BCL2L15Q5TBC7 163 aa9.68□□□□□ -0.86
PALB2-201ENST00000261584 LAIR1Q6GTX8 287 aa9.68□□□□□ -0.86
PALB2-201ENST00000261584 TUBA1AQ71U36 451 aa9.68□□□□□ -0.86
PALB2-201ENST00000261584 TP53I13Q8NBR0 393 aaPredicted RBP9.68□□□□□ -0.86
PALB2-201ENST00000261584 OR5H6Q8NGV6 325 aa9.68□□□□□ -0.86
PALB2-201ENST00000261584 LILRB4Q8NHJ6 448 aa9.68□□□□□ -0.86
PALB2-201ENST00000261584 MGME1Q9BQP7 344 aa9.68□□□□□ -0.86
PALB2-201ENST00000261584 DPCDQ9BVM2 203 aaPredicted RBP9.68□□□□□ -0.86
PALB2-201ENST00000261584 ZDHHC3Q9NYG2 299 aa9.68□□□□□ -0.86
PALB2-201ENST00000261584 CDV3Q9UKY7 258 aaKnown RBP9.68□□□□□ -0.86
PALB2-201ENST00000261584 POFUT2Q9Y2G5 429 aa9.68□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms