RNA–Protein interactions for RNA: ENST00000261517.9

VPS13C-202, Transcript of vacuolar protein sorting 13 homolog C, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VPS13C, Length 13,400 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13C-202ENST00000261517 GKN3PP0CG01 181 aa4.15□□□□□ -1.74
VPS13C-202ENST00000261517 PAX7P23759 505 aa4.15□□□□□ -1.74
VPS13C-202ENST00000261517 CLPPQ16740 277 aaPredicted RBP4.15□□□□□ -1.74
VPS13C-202ENST00000261517 TPRG1LQ5T0D9 272 aa4.15□□□□□ -1.74
VPS13C-202ENST00000261517 SLC27A4Q6P1M0 643 aa4.15□□□□□ -1.74
VPS13C-202ENST00000261517 RBM44Q6ZP01 1051 aaKnown RBP4.15□□□□□ -1.74
VPS13C-202ENST00000261517 OTOP2Q7RTS6 562 aa4.15□□□□□ -1.74
VPS13C-202ENST00000261517 VN1R5Q7Z5H4 357 aa4.15□□□□□ -1.74
VPS13C-202ENST00000261517 LMF2Q9BU23 707 aaKnown RBP4.15□□□□□ -1.74
VPS13C-202ENST00000261517 NPLQ9BXD5 320 aaPredicted RBP4.15□□□□□ -1.74
VPS13C-202ENST00000261517 ACTRT3Q9BYD9 372 aa4.15□□□□□ -1.74
VPS13C-202ENST00000261517 PTTG3PQ9NZH4 202 aa4.15□□□□□ -1.74
VPS13C-202ENST00000261517 MT-CYBP00156 380 aaPredicted RBP4.15□□□□□ -1.75
VPS13C-202ENST00000261517 CSF2RAP15509 400 aa4.15□□□□□ -1.75
VPS13C-202ENST00000261517 PCLAFQ15004 111 aa4.15□□□□□ -1.75
VPS13C-202ENST00000261517 TIGD6Q17RP2 521 aa4.15□□□□□ -1.75
VPS13C-202ENST00000261517 SWI5Q1ZZU3 235 aa4.15□□□□□ -1.75
VPS13C-202ENST00000261517 NOXRED1Q6NXP6 359 aa4.15□□□□□ -1.75
VPS13C-202ENST00000261517 CARFQ8N187 725 aa4.15□□□□□ -1.75
VPS13C-202ENST00000261517 SPATA22Q8NHS9 363 aa4.15□□□□□ -1.75
VPS13C-202ENST00000261517 C1orf216Q8TAB5 229 aa4.15□□□□□ -1.75
VPS13C-202ENST00000261517 SGCDQ92629 289 aa4.15□□□□□ -1.75
VPS13C-202ENST00000261517 GAL3ST3Q96A11 431 aa4.15□□□□□ -1.75
VPS13C-202ENST00000261517 DIRAS2Q96HU8 199 aa4.15□□□□□ -1.75
VPS13C-202ENST00000261517 BTBD2Q9BX70 525 aa4.15□□□□□ -1.75
VPS13C-202ENST00000261517 PINK1Q9BXM7 581 aa4.15□□□□□ -1.75
VPS13C-202ENST00000261517 SEMA6AQ9H2E6 1030 aa4.15□□□□□ -1.75
VPS13C-202ENST00000261517 SMOXQ9NWM0 555 aa4.15□□□□□ -1.75
VPS13C-202ENST00000261517 GIN1Q9NXP7 522 aa4.15□□□□□ -1.75
VPS13C-202ENST00000261517 OGDHLQ9ULD0 1010 aa4.15□□□□□ -1.75
VPS13C-202ENST00000261517 GRIP1Q9Y3R0 1128 aa4.15□□□□□ -1.75
VPS13C-202ENST00000261517 TULP2O00295 520 aa4.15□□□□□ -1.75
VPS13C-202ENST00000261517 PLOD2O00469 737 aa4.15□□□□□ -1.75
VPS13C-202ENST00000261517 WNT7AO00755 349 aa4.15□□□□□ -1.75
VPS13C-202ENST00000261517 ETS2P15036 469 aa4.15□□□□□ -1.75
VPS13C-202ENST00000261517 HSD11B1P28845 292 aa4.15□□□□□ -1.75
VPS13C-202ENST00000261517 TTC3P53804 2025 aa4.15□□□□□ -1.75
VPS13C-202ENST00000261517 RPS24P62847 133 aaKnown RBP4.15□□□□□ -1.75
VPS13C-202ENST00000261517 SLC22A10Q63ZE4 541 aa4.15□□□□□ -1.75
VPS13C-202ENST00000261517 DCDC5Q6ZRR9 648 aa4.15□□□□□ -1.75
VPS13C-202ENST00000261517 ELP5Q8TE02 316 aa4.15□□□□□ -1.75
VPS13C-202ENST00000261517 CCDC32Q9BV29 185 aa4.15□□□□□ -1.75
VPS13C-202ENST00000261517 FGFBP2Q9BYJ0 223 aa4.15□□□□□ -1.75
VPS13C-202ENST00000261517 TNKS2Q9H2K2 1166 aa4.15□□□□□ -1.75
VPS13C-202ENST00000261517 ACOT13Q9NPJ3 140 aa4.15□□□□□ -1.75
VPS13C-202ENST00000261517 PRDM9Q9NQV7 894 aa4.15□□□□□ -1.75
VPS13C-202ENST00000261517 FAM86C1Q9NVL1 165 aa4.15□□□□□ -1.75
VPS13C-202ENST00000261517 AIG1Q9NVV5 245 aa4.15□□□□□ -1.75
VPS13C-202ENST00000261517 ZNF639Q9UID6 485 aa4.15□□□□□ -1.75
VPS13C-202ENST00000261517 IKZF2Q9UKS7 526 aa4.15□□□□□ -1.75
VPS13C-202ENST00000261517 HSPB2A8KAH6 182 aa4.15□□□□□ -1.75
VPS13C-202ENST00000261517 SNNO75324 88 aaPredicted RBP4.15□□□□□ -1.75
VPS13C-202ENST00000261517 TIPRLO75663 272 aa4.15□□□□□ -1.75
VPS13C-202ENST00000261517 HNRNPA2B1P22626 353 aaKnown RBP4.15□□□□□ -1.75
VPS13C-202ENST00000261517 TEAD1P28347 426 aa4.15□□□□□ -1.75
VPS13C-202ENST00000261517 CDH12P55289 794 aa4.15□□□□□ -1.75
VPS13C-202ENST00000261517 ABRAXAS2Q15018 415 aa4.15□□□□□ -1.75
VPS13C-202ENST00000261517 HSPB2Q16082 182 aa4.15□□□□□ -1.75
VPS13C-202ENST00000261517 BLOC1S3Q6QNY0 202 aa4.15□□□□□ -1.75
VPS13C-202ENST00000261517 CEACAM20Q6UY09 585 aa4.15□□□□□ -1.75
VPS13C-202ENST00000261517 RNF113BQ8IZP6 322 aaKnown RBP4.15□□□□□ -1.75
VPS13C-202ENST00000261517 SCAMP5Q8TAC9 235 aa4.15□□□□□ -1.75
VPS13C-202ENST00000261517 ETAA1Q9NY74 926 aa4.15□□□□□ -1.75
VPS13C-202ENST00000261517 GOLGB1Q14789 3259 aaKnown RBP4.15□□□□□ -1.75
VPS13C-202ENST00000261517 MCM3APO60318 1980 aa4.15□□□□□ -1.75
VPS13C-202ENST00000261517 SCAMP2O15127 329 aaKnown RBP4.15□□□□□ -1.75
VPS13C-202ENST00000261517 S1PR1P21453 382 aa4.15□□□□□ -1.75
VPS13C-202ENST00000261517 MC3RP41968 323 aa4.15□□□□□ -1.75
VPS13C-202ENST00000261517 ACTBP60709 375 aa4.15□□□□□ -1.75
VPS13C-202ENST00000261517 ACTG1P63261 375 aa4.15□□□□□ -1.75
VPS13C-202ENST00000261517 SYPL2Q5VXT5 272 aa4.15□□□□□ -1.75
VPS13C-202ENST00000261517 PRSS55Q6UWB4 352 aaPredicted RBP4.15□□□□□ -1.75
VPS13C-202ENST00000261517 CHRDL2Q6WN34 429 aa4.15□□□□□ -1.75
VPS13C-202ENST00000261517 CHERPQ8IWX8 916 aaKnown RBP4.15□□□□□ -1.75
VPS13C-202ENST00000261517 DDX51Q8N8A6 666 aaKnown RBP eCLIP4.15□□□□□ -1.75
VPS13C-202ENST00000261517 OR52N2Q8NGI0 321 aa4.15□□□□□ -1.75
VPS13C-202ENST00000261517 DDIT4LQ96D03 193 aa4.15□□□□□ -1.75
VPS13C-202ENST00000261517 PLCL2Q9UPR0 1127 aa4.15□□□□□ -1.75
VPS13C-202ENST00000261517 C14orf166Q9Y224 244 aaKnown RBP4.15□□□□□ -1.75
VPS13C-202ENST00000261517 SHANK3Q9BYB0 1731 aa4.15□□□□□ -1.75
VPS13C-202ENST00000261517 PLXNB2O15031 1838 aa4.15□□□□□ -1.75
VPS13C-202ENST00000261517 LOC100130705A0A1B0GUX0 176 aa4.15□□□□□ -1.75
VPS13C-202ENST00000261517 EFCAB9A8MZ26 197 aa4.15□□□□□ -1.75
VPS13C-202ENST00000261517 H0YC42 278 aa4.15□□□□□ -1.75
VPS13C-202ENST00000261517 SRPX2O60687 465 aaPredicted RBP4.15□□□□□ -1.75
VPS13C-202ENST00000261517 LRATO95237 230 aa4.15□□□□□ -1.75
VPS13C-202ENST00000261517 AHSGP02765 367 aa4.15□□□□□ -1.75
VPS13C-202ENST00000261517 FBLP22087 321 aaKnown RBP4.15□□□□□ -1.75
VPS13C-202ENST00000261517 GLP1RP43220 463 aa4.15□□□□□ -1.75
VPS13C-202ENST00000261517 GSK3BP49841 420 aa4.15□□□□□ -1.75
VPS13C-202ENST00000261517 CYCSP99999 105 aaKnown RBP4.15□□□□□ -1.75
VPS13C-202ENST00000261517 PTPRRQ15256 657 aa4.15□□□□□ -1.75
VPS13C-202ENST00000261517 MOGQ16653 247 aa4.15□□□□□ -1.75
VPS13C-202ENST00000261517 HNRNPA1L2Q32P51 320 aaKnown RBP4.15□□□□□ -1.75
VPS13C-202ENST00000261517 AADACL2Q6P093 401 aa4.15□□□□□ -1.75
VPS13C-202ENST00000261517 ENPP7Q6UWV6 458 aa4.15□□□□□ -1.75
VPS13C-202ENST00000261517 RANBP10Q6VN20 620 aa4.15□□□□□ -1.75
VPS13C-202ENST00000261517 OSTM1Q86WC4 334 aa4.15□□□□□ -1.75
VPS13C-202ENST00000261517 LIX1LQ8IVB5 337 aa4.15□□□□□ -1.75
VPS13C-202ENST00000261517 MRGPRX2Q96LB1 330 aa4.15□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms