RNA–Protein interactions for RNA: ENST00000261058.2

CCDC54-201, Transcript of coiled-coil domain containing 54, humanhuman

APPRIS P1 BASIC

Gene CCDC54, Length 1,444 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC54-201ENST00000261058 HOXD1Q9GZZ0 328 aa3.79□□□□□ -1.8
CCDC54-201ENST00000261058 TRAF3IP3Q9Y228 551 aa3.79□□□□□ -1.8
CCDC54-201ENST00000261058 N6AMT1Q9Y5N5 214 aa3.79□□□□□ -1.8
CCDC54-201ENST00000261058 NEDD4P46934 1319 aa3.79□□□□□ -1.8
CCDC54-201ENST00000261058 MPTX1A8MV57 137 aa3.78□□□□□ -1.8
CCDC54-201ENST00000261058 A8MVM7 634 aa3.78□□□□□ -1.8
CCDC54-201ENST00000261058 F8VZ95 297 aa3.78□□□□□ -1.8
CCDC54-201ENST00000261058 H0YC42 278 aa3.78□□□□□ -1.8
CCDC54-201ENST00000261058 SLC1A7O00341 560 aa3.78□□□□□ -1.8
CCDC54-201ENST00000261058 RIPK2O43353 540 aa3.78□□□□□ -1.8
CCDC54-201ENST00000261058 GLCEO94923 617 aa3.78□□□□□ -1.8
CCDC54-201ENST00000261058 MT-ND2P03891 347 aa3.78□□□□□ -1.8
CCDC54-201ENST00000261058 PRKAR1AP10644 381 aa3.78□□□□□ -1.8
CCDC54-201ENST00000261058 HSPA5P11021 654 aaKnown RBP3.78□□□□□ -1.8
CCDC54-201ENST00000261058 GOT1P17174 413 aa3.78□□□□□ -1.8
CCDC54-201ENST00000261058 CAPN2P17655 700 aa3.78□□□□□ -1.8
CCDC54-201ENST00000261058 SRD5A2P31213 254 aa3.78□□□□□ -1.8
CCDC54-201ENST00000261058 SLC6A12P48065 614 aa3.78□□□□□ -1.8
CCDC54-201ENST00000261058 HNMTP50135 292 aa3.78□□□□□ -1.8
CCDC54-201ENST00000261058 GTF2A1P52655 376 aaPredicted RBP3.78□□□□□ -1.8
CCDC54-201ENST00000261058 CYCSP99999 105 aaKnown RBP3.78□□□□□ -1.8
CCDC54-201ENST00000261058 FUT11Q495W5 492 aa3.78□□□□□ -1.8
CCDC54-201ENST00000261058 ZNF542PQ5EBM4 170 aa3.78□□□□□ -1.8
CCDC54-201ENST00000261058 CCDC122Q5T0U0 273 aa3.78□□□□□ -1.8
CCDC54-201ENST00000261058 CCDC183Q5T5S1 534 aa3.78□□□□□ -1.8
CCDC54-201ENST00000261058 C12orf60Q5U649 245 aa3.78□□□□□ -1.8
CCDC54-201ENST00000261058 AGAP6Q5VW22 663 aa3.78□□□□□ -1.8
CCDC54-201ENST00000261058 PM20D1Q6GTS8 502 aa3.78□□□□□ -1.8
CCDC54-201ENST00000261058 TEX26Q8N6G2 289 aa3.78□□□□□ -1.8
CCDC54-201ENST00000261058 HCAR2Q8TDS4 363 aa3.78□□□□□ -1.8
CCDC54-201ENST00000261058 ANKRD49Q8WVL7 239 aa3.78□□□□□ -1.8
CCDC54-201ENST00000261058 UBLCP1Q8WVY7 318 aaPredicted RBP3.78□□□□□ -1.8
CCDC54-201ENST00000261058 SLCO2A1Q92959 643 aa3.78□□□□□ -1.8
CCDC54-201ENST00000261058 WBP2Q969T9 261 aa3.78□□□□□ -1.8
CCDC54-201ENST00000261058 NSMCE3Q96MG7 304 aa3.78□□□□□ -1.8
CCDC54-201ENST00000261058 NEDD4LQ96PU5 975 aa3.78□□□□□ -1.8
CCDC54-201ENST00000261058 OPRPNQ99935 248 aaPredicted RBP3.78□□□□□ -1.8
CCDC54-201ENST00000261058 SLC39A3Q9BRY0 314 aa3.78□□□□□ -1.8
CCDC54-201ENST00000261058 KRT23Q9C075 422 aa3.78□□□□□ -1.8
CCDC54-201ENST00000261058 FNDC4Q9H6D8 234 aaPredicted RBP3.78□□□□□ -1.8
CCDC54-201ENST00000261058 ZDHHC18Q9NUE0 388 aa3.78□□□□□ -1.8
CCDC54-201ENST00000261058 COX16Q9P0S2 106 aa3.78□□□□□ -1.8
CCDC54-201ENST00000261058 APPL1Q9UKG1 709 aa3.78□□□□□ -1.8
CCDC54-201ENST00000261058 BARX2Q9UMQ3 279 aaPredicted RBP3.78□□□□□ -1.8
CCDC54-201ENST00000261058 PCDHGA1Q9Y5H4 931 aa3.78□□□□□ -1.8
CCDC54-201ENST00000261058 RAD50Q92878 1312 aa3.78□□□□□ -1.8
CCDC54-201ENST00000261058 MEX3AA1L020 520 aaKnown RBP3.78□□□□□ -1.8
CCDC54-201ENST00000261058 E5RGE8 158 aa3.78□□□□□ -1.8
CCDC54-201ENST00000261058 TTI1O43156 1089 aa3.78□□□□□ -1.8
CCDC54-201ENST00000261058 TLX2O43763 284 aaPredicted RBP3.78□□□□□ -1.8
CCDC54-201ENST00000261058 ATP9AO75110 1047 aa3.78□□□□□ -1.8
CCDC54-201ENST00000261058 PEX11AO75192 247 aa3.78□□□□□ -1.8
CCDC54-201ENST00000261058 RAD51DO75771 328 aa3.78□□□□□ -1.8
CCDC54-201ENST00000261058 NXPH2O95156 264 aa3.78□□□□□ -1.8
CCDC54-201ENST00000261058 ARF4P18085 180 aaPredicted RBP3.78□□□□□ -1.8
CCDC54-201ENST00000261058 CCNA2P20248 432 aa3.78□□□□□ -1.8
CCDC54-201ENST00000261058 CLCN4P51793 760 aa3.78□□□□□ -1.8
CCDC54-201ENST00000261058 LUMP51884 338 aaPredicted RBP3.78□□□□□ -1.8
CCDC54-201ENST00000261058 KRTAP10-6P60371 365 aaPredicted RBP3.78□□□□□ -1.8
CCDC54-201ENST00000261058 DRP2Q13474 957 aa3.78□□□□□ -1.8
CCDC54-201ENST00000261058 FAM106AQ4KMX7 169 aa3.78□□□□□ -1.8
CCDC54-201ENST00000261058 CAVIN4Q5BKX8 364 aa3.78□□□□□ -1.8
CCDC54-201ENST00000261058 FGD3Q5JSP0 725 aa3.78□□□□□ -1.8
CCDC54-201ENST00000261058 OTUD3Q5T2D3 398 aaPredicted RBP3.78□□□□□ -1.8
CCDC54-201ENST00000261058 ATP1A1-AS1Q5TC04 95 aa3.78□□□□□ -1.8
CCDC54-201ENST00000261058 RGS9BPQ6ZS82 235 aa3.78□□□□□ -1.8
CCDC54-201ENST00000261058 CROCCP3Q8IVE0 287 aa3.78□□□□□ -1.8
CCDC54-201ENST00000261058 PEX5LQ8IYB4 626 aa3.78□□□□□ -1.8
CCDC54-201ENST00000261058 SLC22A15Q8IZD6 547 aa3.78□□□□□ -1.8
CCDC54-201ENST00000261058 ZNF248Q8NDW4 579 aa3.78□□□□□ -1.8
CCDC54-201ENST00000261058 OR4D10Q8NGI6 311 aa3.78□□□□□ -1.8
CCDC54-201ENST00000261058 KIAA1524Q8TCG1 905 aa3.78□□□□□ -1.8
CCDC54-201ENST00000261058 CHURC1Q8WUH1 139 aa3.78□□□□□ -1.8
CCDC54-201ENST00000261058 SLC5A11Q8WWX8 675 aa3.78□□□□□ -1.8
CCDC54-201ENST00000261058 BCL2L2Q92843 193 aaPredicted RBP3.78□□□□□ -1.8
CCDC54-201ENST00000261058 OMA1Q96E52 524 aa3.78□□□□□ -1.8
CCDC54-201ENST00000261058 POM121L2Q96KW2 1035 aa3.78□□□□□ -1.8
CCDC54-201ENST00000261058 PANX3Q96QZ0 392 aa3.78□□□□□ -1.8
CCDC54-201ENST00000261058 USP28Q96RU2 1077 aa3.78□□□□□ -1.8
CCDC54-201ENST00000261058 SYT15Q9BQS2 421 aa3.78□□□□□ -1.8
CCDC54-201ENST00000261058 TBCDQ9BTW9 1192 aa3.78□□□□□ -1.8
CCDC54-201ENST00000261058 ACPTQ9BZG2 426 aa3.78□□□□□ -1.8
CCDC54-201ENST00000261058 WWTR1Q9GZV5 400 aa3.78□□□□□ -1.8
CCDC54-201ENST00000261058 MTHFD2LQ9H903 347 aaPredicted RBP3.78□□□□□ -1.8
CCDC54-201ENST00000261058 RPF1Q9H9Y2 349 aaKnown RBP3.78□□□□□ -1.8
CCDC54-201ENST00000261058 TM9SF3Q9HD45 589 aa3.78□□□□□ -1.8
CCDC54-201ENST00000261058 TMEM161AQ9NX61 479 aa3.78□□□□□ -1.8
CCDC54-201ENST00000261058 NINJ2Q9NZG7 142 aa3.78□□□□□ -1.8
CCDC54-201ENST00000261058 SATB2Q9UPW6 733 aa3.78□□□□□ -1.8
CCDC54-201ENST00000261058 AURKCQ9UQB9 309 aa3.78□□□□□ -1.8
CCDC54-201ENST00000261058 EXOGQ9Y2C4 368 aaKnown RBP3.78□□□□□ -1.8
CCDC54-201ENST00000261058 NSG2Q9Y328 171 aa3.78□□□□□ -1.8
CCDC54-201ENST00000261058 A0A087X0K7 114 aa3.77□□□□□ -1.81
CCDC54-201ENST00000261058 FAM149AA5PLN7 773 aa3.77□□□□□ -1.81
CCDC54-201ENST00000261058 NPIPB9F8W1W9 429 aa3.77□□□□□ -1.81
CCDC54-201ENST00000261058 M0QX08 132 aa3.77□□□□□ -1.81
CCDC54-201ENST00000261058 SGK1O00141 431 aa3.77□□□□□ -1.81
CCDC54-201ENST00000261058 SURF4O15260 269 aa3.77□□□□□ -1.81
CCDC54-201ENST00000261058 MLNRO43193 412 aa3.77□□□□□ -1.81
CCDC54-201ENST00000261058 ECE2O60344 883 aa3.77□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 59.8 ms