RNA–Protein interactions for RNA: ENST00000261037.7

COL8A1-201, Transcript of collagen type VIII alpha 1 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL8A1, Length 5,705 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL8A1-201ENST00000261037 LRRC69Q6ZNQ3 347 aa11.65□□□□□ -0.54
COL8A1-201ENST00000261037 BORCS8Q96FH0 119 aa11.65□□□□□ -0.54
COL8A1-201ENST00000261037 SPHK2Q9NRA0 654 aa11.65□□□□□ -0.54
COL8A1-201ENST00000261037 ST6GALNAC1Q9NSC7 600 aaPredicted RBP11.65□□□□□ -0.54
COL8A1-201ENST00000261037 GPR34Q9UPC5 381 aa11.65□□□□□ -0.54
COL8A1-201ENST00000261037 HSPA12AO43301 675 aa11.65□□□□□ -0.54
COL8A1-201ENST00000261037 ONECUT3O60422 494 aaPredicted RBP11.65□□□□□ -0.54
COL8A1-201ENST00000261037 MSX1P28360 303 aa11.65□□□□□ -0.54
COL8A1-201ENST00000261037 UQCRC1P31930 480 aa11.65□□□□□ -0.54
COL8A1-201ENST00000261037 RBM34P42696 430 aaKnown RBP11.65□□□□□ -0.54
COL8A1-201ENST00000261037 ENTPD1P49961 510 aa11.65□□□□□ -0.54
COL8A1-201ENST00000261037 LRIT3Q3SXY7 679 aa11.65□□□□□ -0.54
COL8A1-201ENST00000261037 KIAA1614Q5VZ46 1190 aa11.65□□□□□ -0.54
COL8A1-201ENST00000261037 GTF2IRD2BQ6EKJ0 949 aa11.65□□□□□ -0.54
COL8A1-201ENST00000261037 GTF2IRD2Q86UP8 949 aa11.65□□□□□ -0.54
COL8A1-201ENST00000261037 OR4K14Q8NGD5 310 aa11.65□□□□□ -0.54
COL8A1-201ENST00000261037 THAP6Q8TBB0 222 aa11.65□□□□□ -0.54
COL8A1-201ENST00000261037 TSGA13Q96PP4 275 aa11.65□□□□□ -0.54
COL8A1-201ENST00000261037 NLGN3Q9NZ94 848 aa11.65□□□□□ -0.54
COL8A1-201ENST00000261037 NUP50Q9UKX7 468 aa11.65□□□□□ -0.54
COL8A1-201ENST00000261037 SARDHQ9UL12 918 aa11.65□□□□□ -0.54
COL8A1-201ENST00000261037 RNGTTO60942 597 aaKnown RBP11.65□□□□□ -0.55
COL8A1-201ENST00000261037 F2P00734 622 aa11.65□□□□□ -0.55
COL8A1-201ENST00000261037 FGF3P11487 239 aaPredicted RBP11.65□□□□□ -0.55
COL8A1-201ENST00000261037 CD1DP15813 335 aa11.65□□□□□ -0.55
COL8A1-201ENST00000261037 GLDCP23378 1020 aa11.65□□□□□ -0.55
COL8A1-201ENST00000261037 ZNF517Q6ZMY9 492 aaPredicted RBP11.65□□□□□ -0.55
COL8A1-201ENST00000261037 CARM1Q86X55 608 aa11.65□□□□□ -0.55
COL8A1-201ENST00000261037 PACRGLQ8N7B6 248 aa11.65□□□□□ -0.55
COL8A1-201ENST00000261037 OTUB2Q96DC9 234 aa11.65□□□□□ -0.55
COL8A1-201ENST00000261037 MRGPRX2Q96LB1 330 aa11.65□□□□□ -0.55
COL8A1-201ENST00000261037 PRSS51A0A1B0GVH4 220 aa11.64□□□□□ -0.55
COL8A1-201ENST00000261037 HCRTR2O43614 444 aa11.64□□□□□ -0.55
COL8A1-201ENST00000261037 NAA10P41227 235 aaPredicted RBP11.64□□□□□ -0.55
COL8A1-201ENST00000261037 SNU13P55769 128 aaKnown RBP11.64□□□□□ -0.55
COL8A1-201ENST00000261037 RPS26P62854 115 aaKnown RBP11.64□□□□□ -0.55
COL8A1-201ENST00000261037 SGCAQ16586 387 aa11.64□□□□□ -0.55
COL8A1-201ENST00000261037 EXOC3L2Q2M3D2 409 aa11.64□□□□□ -0.55
COL8A1-201ENST00000261037 PLEKHS1Q5SXH7 462 aa11.64□□□□□ -0.55
COL8A1-201ENST00000261037 DDX1Q92499 740 aaKnown RBP11.64□□□□□ -0.55
COL8A1-201ENST00000261037 PCYT2Q99447 389 aa11.64□□□□□ -0.55
COL8A1-201ENST00000261037 POLE4Q9NR33 117 aa11.64□□□□□ -0.55
COL8A1-201ENST00000261037 METTL21EPA6NDL7 271 aa11.64□□□□□ -0.55
COL8A1-201ENST00000261037 MEN1O00255 615 aa11.64□□□□□ -0.55
COL8A1-201ENST00000261037 FECHP22830 423 aa11.64□□□□□ -0.55
COL8A1-201ENST00000261037 GMPRP36959 345 aa11.64□□□□□ -0.55
COL8A1-201ENST00000261037 INCA1Q0VD86 236 aa11.64□□□□□ -0.55
COL8A1-201ENST00000261037 ATXN7L3Q14CW9 347 aaPredicted RBP11.64□□□□□ -0.55
COL8A1-201ENST00000261037 REEP3Q6NUK4 255 aa11.64□□□□□ -0.55
COL8A1-201ENST00000261037 NSMAFQ92636 917 aa11.64□□□□□ -0.55
COL8A1-201ENST00000261037 OSTF1Q92882 214 aa11.64□□□□□ -0.55
COL8A1-201ENST00000261037 PAAF1Q9BRP4 392 aa11.64□□□□□ -0.55
COL8A1-201ENST00000261037 GPR174Q9BXC1 333 aa11.64□□□□□ -0.55
COL8A1-201ENST00000261037 LDHAL6BQ9BYZ2 381 aaPredicted RBP11.64□□□□□ -0.55
COL8A1-201ENST00000261037 GPR62Q9BZJ7 368 aa11.64□□□□□ -0.55
COL8A1-201ENST00000261037 SLC2A4RGQ9NR83 387 aa11.64□□□□□ -0.55
COL8A1-201ENST00000261037 NUDT15Q9NV35 164 aa11.64□□□□□ -0.55
COL8A1-201ENST00000261037 HCN2Q9UL51 889 aa11.64□□□□□ -0.55
COL8A1-201ENST00000261037 ZNF451Q9Y4E5 1061 aa11.64□□□□□ -0.55
COL8A1-201ENST00000261037 CD9P21926 228 aa11.64□□□□□ -0.55
COL8A1-201ENST00000261037 FBLP22087 321 aaKnown RBP11.64□□□□□ -0.55
COL8A1-201ENST00000261037 ABHD18Q0P651 414 aa11.64□□□□□ -0.55
COL8A1-201ENST00000261037 RAB39AQ14964 217 aa11.64□□□□□ -0.55
COL8A1-201ENST00000261037 ASPGQ86U10 573 aa11.64□□□□□ -0.55
COL8A1-201ENST00000261037 DPH2Q9BQC3 489 aaPredicted RBP11.64□□□□□ -0.55
COL8A1-201ENST00000261037 MOV10Q9HCE1 1003 aaKnown RBP11.64□□□□□ -0.55
COL8A1-201ENST00000261037 ENAMQ9NRM1 1142 aa11.64□□□□□ -0.55
COL8A1-201ENST00000261037 KCNS2Q9ULS6 477 aa11.64□□□□□ -0.55
COL8A1-201ENST00000261037 FAM221BA6H8Z2 402 aa11.64□□□□□ -0.55
COL8A1-201ENST00000261037 MATN2O00339 956 aa11.64□□□□□ -0.55
COL8A1-201ENST00000261037 NUAK1O60285 661 aa11.64□□□□□ -0.55
COL8A1-201ENST00000261037 HLA-DPB1P04440 258 aa11.64□□□□□ -0.55
COL8A1-201ENST00000261037 MAGEA2P43356 314 aa11.64□□□□□ -0.55
COL8A1-201ENST00000261037 MECP2P51608 486 aaKnown RBP11.64□□□□□ -0.55
COL8A1-201ENST00000261037 CDKN2DP55273 166 aa11.64□□□□□ -0.55
COL8A1-201ENST00000261037 FXYD6P3P58550 94 aa11.64□□□□□ -0.55
COL8A1-201ENST00000261037 SOX4Q06945 474 aaPredicted RBP11.64□□□□□ -0.55
COL8A1-201ENST00000261037 SLAMF1Q13291 335 aa11.64□□□□□ -0.55
COL8A1-201ENST00000261037 TMEM225Q6GV28 225 aa11.64□□□□□ -0.55
COL8A1-201ENST00000261037 ZSCAN4Q8NAM6 433 aaPredicted RBP11.64□□□□□ -0.55
COL8A1-201ENST00000261037 NUP43Q8NFH3 380 aa11.64□□□□□ -0.55
COL8A1-201ENST00000261037 SEC14L1Q92503 715 aa11.64□□□□□ -0.55
COL8A1-201ENST00000261037 SIGLEC10Q96LC7 697 aa11.64□□□□□ -0.55
COL8A1-201ENST00000261037 PTCHD1Q96NR3 888 aa11.64□□□□□ -0.55
COL8A1-201ENST00000261037 OR2M4Q96R27 311 aa11.64□□□□□ -0.55
COL8A1-201ENST00000261037 PTGES2Q9H7Z7 377 aa11.64□□□□□ -0.55
COL8A1-201ENST00000261037 ENY2Q9NPA8 101 aa11.64□□□□□ -0.55
COL8A1-201ENST00000261037 ERVK-18Q9QC07 812 aa11.64□□□□□ -0.55
COL8A1-201ENST00000261037 ABCD2Q9UBJ2 740 aa11.64□□□□□ -0.55
COL8A1-201ENST00000261037 OARD1Q9Y530 152 aa11.64□□□□□ -0.55
COL8A1-201ENST00000261037 MT-ND5P03915 603 aa11.63□□□□□ -0.55
COL8A1-201ENST00000261037 ASGR2P07307 311 aa11.63□□□□□ -0.55
COL8A1-201ENST00000261037 SHMT2P34897 504 aa11.63□□□□□ -0.55
COL8A1-201ENST00000261037 RFC2P35250 354 aa11.63□□□□□ -0.55
COL8A1-201ENST00000261037 PSMA6P60900 246 aaKnown RBP11.63□□□□□ -0.55
COL8A1-201ENST00000261037 PTGR1Q14914 329 aa11.63□□□□□ -0.55
COL8A1-201ENST00000261037 TRAM2Q15035 370 aa11.63□□□□□ -0.55
COL8A1-201ENST00000261037 ELOCQ15369 112 aa11.63□□□□□ -0.55
COL8A1-201ENST00000261037 SEC23BQ15437 767 aa11.63□□□□□ -0.55
COL8A1-201ENST00000261037 NLGN4XQ8N0W4 816 aa11.63□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms