RNA–Protein interactions for RNA: ENST00000257290.9

PDGFRA-201, Transcript of platelet derived growth factor receptor alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDGFRA, Length 6,576 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFRA-201ENST00000257290 CTDSP2O14595 271 aa6.52□□□□□ -1.37
PDGFRA-201ENST00000257290 UBXN7O94888 489 aa6.52□□□□□ -1.37
PDGFRA-201ENST00000257290 TPOP07202 933 aa6.52□□□□□ -1.37
PDGFRA-201ENST00000257290 TOB1P50616 345 aaPredicted RBP6.52□□□□□ -1.37
PDGFRA-201ENST00000257290 EFNA5P52803 228 aa6.52□□□□□ -1.37
PDGFRA-201ENST00000257290 HCCSP53701 268 aa6.52□□□□□ -1.37
PDGFRA-201ENST00000257290 CDH8P55286 799 aa6.52□□□□□ -1.37
PDGFRA-201ENST00000257290 CLINT1Q14677 625 aa6.52□□□□□ -1.37
PDGFRA-201ENST00000257290 FAM83EQ2M2I3 478 aa6.52□□□□□ -1.37
PDGFRA-201ENST00000257290 GRHL2Q6ISB3 625 aa6.52□□□□□ -1.37
PDGFRA-201ENST00000257290 GPR153Q6NV75 609 aa6.52□□□□□ -1.37
PDGFRA-201ENST00000257290 LETMD1Q6P1Q0 360 aa6.52□□□□□ -1.37
PDGFRA-201ENST00000257290 FAM171BQ6P995 826 aa6.52□□□□□ -1.37
PDGFRA-201ENST00000257290 LIPIQ6XZB0 460 aa6.52□□□□□ -1.37
PDGFRA-201ENST00000257290 S100A7AQ86SG5 101 aa6.52□□□□□ -1.37
PDGFRA-201ENST00000257290 GPR137CQ8N3F9 429 aa6.52□□□□□ -1.37
PDGFRA-201ENST00000257290 RCBTB1Q8NDN9 531 aa6.52□□□□□ -1.37
PDGFRA-201ENST00000257290 CMSS1Q9BQ75 279 aaKnown RBP6.52□□□□□ -1.37
PDGFRA-201ENST00000257290 OR51J1Q9H342 316 aa6.52□□□□□ -1.37
PDGFRA-201ENST00000257290 SLC28A3Q9HAS3 691 aa6.52□□□□□ -1.37
PDGFRA-201ENST00000257290 ZCCHC3Q9NUD5 404 aaKnown RBP6.52□□□□□ -1.37
PDGFRA-201ENST00000257290 TMEM184CQ9NVA4 438 aa6.52□□□□□ -1.37
PDGFRA-201ENST00000257290 RAP2CQ9Y3L5 183 aa6.52□□□□□ -1.37
PDGFRA-201ENST00000257290 BCLAF3A2AJT9 711 aaKnown RBP6.51□□□□□ -1.37
PDGFRA-201ENST00000257290 KLF11O14901 512 aa6.51□□□□□ -1.37
PDGFRA-201ENST00000257290 EPHA3P29320 983 aa6.51□□□□□ -1.37
PDGFRA-201ENST00000257290 CA5AP35218 305 aa6.51□□□□□ -1.37
PDGFRA-201ENST00000257290 BACE1P56817 501 aa6.51□□□□□ -1.37
PDGFRA-201ENST00000257290 ALKAL2Q6UX46 152 aa6.51□□□□□ -1.37
PDGFRA-201ENST00000257290 MRPL10Q7Z7H8 261 aaKnown RBP6.51□□□□□ -1.37
PDGFRA-201ENST00000257290 GPR149Q86SP6 731 aa6.51□□□□□ -1.37
PDGFRA-201ENST00000257290 VRK3Q8IV63 474 aa6.51□□□□□ -1.37
PDGFRA-201ENST00000257290 CCDC117Q8IWD4 279 aaPredicted RBP6.51□□□□□ -1.37
PDGFRA-201ENST00000257290 FAM126BQ8IXS8 530 aa6.51□□□□□ -1.37
PDGFRA-201ENST00000257290 GPC2Q8N158 579 aa6.51□□□□□ -1.37
PDGFRA-201ENST00000257290 OR4A15Q8NGL6 344 aa6.51□□□□□ -1.37
PDGFRA-201ENST00000257290 TIFAQ96CG3 184 aa6.51□□□□□ -1.37
PDGFRA-201ENST00000257290 SMARCD1Q96GM5 515 aa6.51□□□□□ -1.37
PDGFRA-201ENST00000257290 THAP2Q9H0W7 228 aa6.51□□□□□ -1.37
PDGFRA-201ENST00000257290 OR2AG1Q9H205 316 aa6.51□□□□□ -1.37
PDGFRA-201ENST00000257290 EPB41L4BQ9H329 900 aa6.51□□□□□ -1.37
PDGFRA-201ENST00000257290 DDX4Q9NQI0 724 aaKnown RBP6.51□□□□□ -1.37
PDGFRA-201ENST00000257290 GPR160Q9UJ42 338 aa6.51□□□□□ -1.37
PDGFRA-201ENST00000257290 SCN11AQ9UI33 1791 aa6.51□□□□□ -1.37
PDGFRA-201ENST00000257290 TMIGD3P0DMS9 266 aaPredicted RBP6.51□□□□□ -1.37
PDGFRA-201ENST00000257290 G6PDP11413 515 aa6.51□□□□□ -1.37
PDGFRA-201ENST00000257290 VAMP7P51809 220 aa6.51□□□□□ -1.37
PDGFRA-201ENST00000257290 ARSFP54793 590 aa6.51□□□□□ -1.37
PDGFRA-201ENST00000257290 CDC42EP1Q00587 391 aa6.51□□□□□ -1.37
PDGFRA-201ENST00000257290 DSC2Q02487 901 aa6.51□□□□□ -1.37
PDGFRA-201ENST00000257290 ADAM5Q6NVV9 412 aa6.51□□□□□ -1.37
PDGFRA-201ENST00000257290 PSRC1Q6PGN9 363 aaPredicted RBP6.51□□□□□ -1.37
PDGFRA-201ENST00000257290 SLC29A4Q7RTT9 530 aa6.51□□□□□ -1.37
PDGFRA-201ENST00000257290 FAM35AQ86V20 835 aa6.51□□□□□ -1.37
PDGFRA-201ENST00000257290 ZNF619Q8N2I2 560 aa6.51□□□□□ -1.37
PDGFRA-201ENST00000257290 NUDT10Q8NFP7 164 aa6.51□□□□□ -1.37
PDGFRA-201ENST00000257290 OR7D4Q8NG98 312 aa6.51□□□□□ -1.37
PDGFRA-201ENST00000257290 RAB24Q969Q5 203 aa6.51□□□□□ -1.37
PDGFRA-201ENST00000257290 FCRL1Q96LA6 429 aa6.51□□□□□ -1.37
PDGFRA-201ENST00000257290 FAM193BQ96PV7 902 aaPredicted RBP6.51□□□□□ -1.37
PDGFRA-201ENST00000257290 EBNA1BP2Q99848 306 aaKnown RBP6.51□□□□□ -1.37
PDGFRA-201ENST00000257290 ZNF2Q9BSG1 426 aaPredicted RBP6.51□□□□□ -1.37
PDGFRA-201ENST00000257290 EVA1AQ9H8M9 152 aa6.51□□□□□ -1.37
PDGFRA-201ENST00000257290 GHRLQ9UBU3 117 aa6.51□□□□□ -1.37
PDGFRA-201ENST00000257290 SAMD4AQ9UPU9 718 aaKnown RBP6.51□□□□□ -1.37
PDGFRA-201ENST00000257290 VIRMAQ69YN4 1812 aaKnown RBP6.51□□□□□ -1.37
PDGFRA-201ENST00000257290 ARFGEF2Q9Y6D5 1785 aa6.51□□□□□ -1.37
PDGFRA-201ENST00000257290 IRGMA1A4Y4 181 aa6.51□□□□□ -1.37
PDGFRA-201ENST00000257290 MYMKA6NI61 221 aa6.51□□□□□ -1.37
PDGFRA-201ENST00000257290 CLDN4O14493 209 aa6.51□□□□□ -1.37
PDGFRA-201ENST00000257290 RASAL1O95294 804 aa6.51□□□□□ -1.37
PDGFRA-201ENST00000257290 ALDOBP05062 364 aa6.51□□□□□ -1.37
PDGFRA-201ENST00000257290 SRPRAP08240 638 aaKnown RBP6.51□□□□□ -1.37
PDGFRA-201ENST00000257290 CPEP16870 476 aa6.51□□□□□ -1.37
PDGFRA-201ENST00000257290 TFEBP19484 476 aa6.51□□□□□ -1.37
PDGFRA-201ENST00000257290 GRIA4P48058 902 aa6.51□□□□□ -1.37
PDGFRA-201ENST00000257290 FCN2Q15485 313 aa6.51□□□□□ -1.37
PDGFRA-201ENST00000257290 NKAIN4Q8IVV8 208 aa6.51□□□□□ -1.37
PDGFRA-201ENST00000257290 CDK20Q8IZL9 346 aa6.51□□□□□ -1.37
PDGFRA-201ENST00000257290 FSTL5Q8N475 847 aaPredicted RBP6.51□□□□□ -1.37
PDGFRA-201ENST00000257290 FAM160A2Q8N612 972 aaPredicted RBP6.51□□□□□ -1.37
PDGFRA-201ENST00000257290 PRELID2Q8N945 189 aa6.51□□□□□ -1.37
PDGFRA-201ENST00000257290 TMEM104Q8NE00 496 aa6.51□□□□□ -1.37
PDGFRA-201ENST00000257290 ATOH1Q92858 354 aaPredicted RBP6.51□□□□□ -1.37
PDGFRA-201ENST00000257290 TOE1Q96GM8 510 aaKnown RBP6.51□□□□□ -1.37
PDGFRA-201ENST00000257290 KCTD7Q96MP8 289 aa6.51□□□□□ -1.37
PDGFRA-201ENST00000257290 MRPL4Q9BYD3 311 aaKnown RBP6.51□□□□□ -1.37
PDGFRA-201ENST00000257290 NMUR1Q9HB89 426 aa6.51□□□□□ -1.37
PDGFRA-201ENST00000257290 KCMF1Q9P0J7 381 aa6.51□□□□□ -1.37
PDGFRA-201ENST00000257290 PCDHB7Q9Y5E2 793 aa6.51□□□□□ -1.37
PDGFRA-201ENST00000257290 FOXO6A8MYZ6 492 aa6.51□□□□□ -1.37
PDGFRA-201ENST00000257290 NDUFS3O75489 264 aa6.51□□□□□ -1.37
PDGFRA-201ENST00000257290 OPN1MWP04001 364 aa6.51□□□□□ -1.37
PDGFRA-201ENST00000257290 OPN1MW2P0DN77 364 aa6.51□□□□□ -1.37
PDGFRA-201ENST00000257290 OPN1MW3P0DN78 364 aa6.51□□□□□ -1.37
PDGFRA-201ENST00000257290 GTF2F2P13984 249 aa6.51□□□□□ -1.37
PDGFRA-201ENST00000257290 OR2B8PP59922 312 aa6.51□□□□□ -1.37
PDGFRA-201ENST00000257290 BCL2L15Q5TBC7 163 aa6.51□□□□□ -1.37
PDGFRA-201ENST00000257290 RANBP3LQ86VV4 465 aaPredicted RBP6.51□□□□□ -1.37
PDGFRA-201ENST00000257290 ASB11Q8WXH4 323 aa6.51□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms