RNA–Protein interactions for RNA: ENST00000250495.9

NEDD8-201, Transcript of neural precursor cell expressed, developmentally down-regulated 8, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NEDD8, Length 708 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD8-201ENST00000250495 TBX6O95947 436 aaPredicted RBP19.62■□□□□ 0.73
NEDD8-201ENST00000250495 SNRPB2P08579 225 aaKnown RBP19.62■□□□□ 0.73
NEDD8-201ENST00000250495 TFEBP19484 476 aa19.62■□□□□ 0.73
NEDD8-201ENST00000250495 GP5P40197 560 aa19.62■□□□□ 0.73
NEDD8-201ENST00000250495 SSR4P51571 173 aa19.62■□□□□ 0.73
NEDD8-201ENST00000250495 HNRNPFP52597 415 aaKnown RBP19.62■□□□□ 0.73
NEDD8-201ENST00000250495 LIM2P55344 173 aa19.62■□□□□ 0.73
NEDD8-201ENST00000250495 BMPR2Q13873 1038 aa19.62■□□□□ 0.73
NEDD8-201ENST00000250495 DOC2AQ14183 400 aa19.62■□□□□ 0.73
NEDD8-201ENST00000250495 EFTUD2Q15029 972 aaKnown RBP eCLIP19.62■□□□□ 0.731e-8■■■□□ 18.3
NEDD8-201ENST00000250495 ELAVL1Q15717 326 aaKnown RBP19.62■□□□□ 0.73
NEDD8-201ENST00000250495 PDK4Q16654 411 aa19.62■□□□□ 0.73
NEDD8-201ENST00000250495 PAGE2BQ5JRK9 111 aa19.62■□□□□ 0.73
NEDD8-201ENST00000250495 C3orf62Q6ZUJ4 267 aa19.62■□□□□ 0.73
NEDD8-201ENST00000250495 VN1R5Q7Z5H4 357 aa19.62■□□□□ 0.73
NEDD8-201ENST00000250495 CHERPQ8IWX8 916 aaKnown RBP19.62■□□□□ 0.73
NEDD8-201ENST00000250495 C17orf53Q8N3J3 647 aaPredicted RBP19.62■□□□□ 0.73
NEDD8-201ENST00000250495 FAM47BQ8NA70 645 aa19.62■□□□□ 0.73
NEDD8-201ENST00000250495 TMEM52Q8NDY8 209 aa19.62■□□□□ 0.73
NEDD8-201ENST00000250495 SRFBP1Q8NEF9 429 aaKnown RBP19.62■□□□□ 0.73
NEDD8-201ENST00000250495 C16orf52Q8NHV5 167 aa19.62■□□□□ 0.73
NEDD8-201ENST00000250495 ROGDIQ9GZN7 287 aa19.62■□□□□ 0.73
NEDD8-201ENST00000250495 DPH5Q9H2P9 285 aa19.62■□□□□ 0.73
NEDD8-201ENST00000250495 TIMMDC1Q9NPL8 285 aa19.62■□□□□ 0.73
NEDD8-201ENST00000250495 ZNF223Q9UK11 482 aaPredicted RBP19.62■□□□□ 0.73
NEDD8-201ENST00000250495 PTBP2Q9UKA9 531 aaKnown RBP19.62■□□□□ 0.73
NEDD8-201ENST00000250495 CLCA3PQ9Y6N3 262 aa19.62■□□□□ 0.73
NEDD8-201ENST00000250495 CYR61O00622 381 aa19.61■□□□□ 0.73
NEDD8-201ENST00000250495 ZNHIT1O43257 154 aa19.61■□□□□ 0.73
NEDD8-201ENST00000250495 S100BP04271 92 aaPredicted RBP19.61■□□□□ 0.73
NEDD8-201ENST00000250495 IFNA16P05015 189 aa19.61■□□□□ 0.73
NEDD8-201ENST00000250495 GSTA2P09210 222 aa19.61■□□□□ 0.73
NEDD8-201ENST00000250495 PPP2R1BP30154 601 aa19.61■□□□□ 0.73
NEDD8-201ENST00000250495 PTGS2P35354 604 aa19.61■□□□□ 0.73
NEDD8-201ENST00000250495 MRPS25P82663 173 aaKnown RBP19.61■□□□□ 0.73
NEDD8-201ENST00000250495 OR4D1Q15615 310 aa19.61■□□□□ 0.73
NEDD8-201ENST00000250495 FBXO48Q5FWF7 155 aa19.61■□□□□ 0.73
NEDD8-201ENST00000250495 GPALPP1Q8IXQ4 340 aa19.61■□□□□ 0.73
NEDD8-201ENST00000250495 PDPRQ8NCN5 879 aa19.61■□□□□ 0.73
NEDD8-201ENST00000250495 DAZLQ92904 295 aaKnown RBP19.61■□□□□ 0.73
NEDD8-201ENST00000250495 KIAA1191Q96A73 305 aa19.61■□□□□ 0.73
NEDD8-201ENST00000250495 ESAMQ96AP7 390 aa19.61■□□□□ 0.73
NEDD8-201ENST00000250495 UBXN10Q96LJ8 280 aa19.61■□□□□ 0.73
NEDD8-201ENST00000250495 PRDM7Q9NQW5 492 aa19.61■□□□□ 0.73
NEDD8-201ENST00000250495 ERVK-11Q9UQG0 969 aa19.61■□□□□ 0.73
NEDD8-201ENST00000250495 APCP25054 2843 aa19.61■□□□□ 0.73
NEDD8-201ENST00000250495 TCRBV9S1A1TA0A576 114 aa19.6■□□□□ 0.73
NEDD8-201ENST00000250495 FAM159BA6NKW6 160 aa19.6■□□□□ 0.73
NEDD8-201ENST00000250495 TGFBR3LH3BV60 316 aa19.6■□□□□ 0.73
NEDD8-201ENST00000250495 KIF2AO00139 706 aaPredicted RBP19.6■□□□□ 0.73
NEDD8-201ENST00000250495 PRAMEF4O60810 478 aa19.6■□□□□ 0.73
NEDD8-201ENST00000250495 CERS1P27544 350 aa19.6■□□□□ 0.73
NEDD8-201ENST00000250495 PTGER1P34995 402 aa19.6■□□□□ 0.73
NEDD8-201ENST00000250495 SPRP35270 261 aaPredicted RBP19.6■□□□□ 0.73
NEDD8-201ENST00000250495 KCNC1P48547 511 aa19.6■□□□□ 0.73
NEDD8-201ENST00000250495 RAB10P61026 200 aa19.6■□□□□ 0.73
NEDD8-201ENST00000250495 IRF8Q02556 426 aa19.6■□□□□ 0.73
NEDD8-201ENST00000250495 STX4Q12846 297 aa19.6■□□□□ 0.73
NEDD8-201ENST00000250495 TBCCQ15814 346 aa19.6■□□□□ 0.73
NEDD8-201ENST00000250495 GRTP1Q5TC63 336 aa19.6■□□□□ 0.73
NEDD8-201ENST00000250495 PRAMEF9Q5VWM5 478 aa19.6■□□□□ 0.73
NEDD8-201ENST00000250495 MDGA2Q7Z553 956 aa19.6■□□□□ 0.73
NEDD8-201ENST00000250495 FGD2Q7Z6J4 655 aa19.6■□□□□ 0.73
NEDD8-201ENST00000250495 CLNKQ7Z7G1 428 aa19.6■□□□□ 0.73
NEDD8-201ENST00000250495 ZFP62Q8NB50 900 aaPredicted RBP19.6■□□□□ 0.73
NEDD8-201ENST00000250495 C7orf57Q8NEG2 295 aa19.6■□□□□ 0.73
NEDD8-201ENST00000250495 STAG3L4Q8TBR4 150 aa19.6■□□□□ 0.73
NEDD8-201ENST00000250495 UBE2E3Q969T4 207 aa19.6■□□□□ 0.73
NEDD8-201ENST00000250495 KCNC2Q96PR1 638 aa19.6■□□□□ 0.73
NEDD8-201ENST00000250495 F2RL3Q96RI0 385 aa19.6■□□□□ 0.73
NEDD8-201ENST00000250495 ALOXE3Q9BYJ1 711 aa19.6■□□□□ 0.73
NEDD8-201ENST00000250495 CD244Q9BZW8 370 aa19.6■□□□□ 0.73
NEDD8-201ENST00000250495 PRM3Q9NNZ6 103 aa19.6■□□□□ 0.73
NEDD8-201ENST00000250495 VTI1BQ9UEU0 232 aa19.6■□□□□ 0.73
NEDD8-201ENST00000250495 RNF112Q9ULX5 631 aa19.6■□□□□ 0.73
NEDD8-201ENST00000250495 CACNA1CQ13936 2221 aa19.6■□□□□ 0.73
NEDD8-201ENST00000250495 A0A1B0GTH9 108 aa19.59■□□□□ 0.73
NEDD8-201ENST00000250495 A8MVJ9 347 aa19.59■□□□□ 0.73
NEDD8-201ENST00000250495 HS6ST1O60243 411 aa19.59■□□□□ 0.73
NEDD8-201ENST00000250495 CCNT2O60583 730 aaKnown RBP19.59■□□□□ 0.73
NEDD8-201ENST00000250495 TUBB4AP04350 444 aa19.59■□□□□ 0.73
NEDD8-201ENST00000250495 RFC3P40938 356 aa19.59■□□□□ 0.73
NEDD8-201ENST00000250495 CASP2P42575 452 aa19.59■□□□□ 0.73
NEDD8-201ENST00000250495 CHIT1Q13231 466 aa19.59■□□□□ 0.73
NEDD8-201ENST00000250495 ZKSCAN8Q15776 578 aaPredicted RBP19.59■□□□□ 0.73
NEDD8-201ENST00000250495 HSDL2Q6YN16 418 aa19.59■□□□□ 0.73
NEDD8-201ENST00000250495 CTAGE3PQ8IX95 158 aa19.59■□□□□ 0.73
NEDD8-201ENST00000250495 MORN4Q8NDC4 146 aa19.59■□□□□ 0.73
NEDD8-201ENST00000250495 FAM57AQ8TBR7 257 aa19.59■□□□□ 0.73
NEDD8-201ENST00000250495 ASB15Q8WXK1 588 aa19.59■□□□□ 0.73
NEDD8-201ENST00000250495 DMRTA2Q96SC8 542 aa19.59■□□□□ 0.73
NEDD8-201ENST00000250495 CSF3RQ99062 836 aa19.59■□□□□ 0.73
NEDD8-201ENST00000250495 TBCDQ9BTW9 1192 aa19.59■□□□□ 0.73
NEDD8-201ENST00000250495 LYRM4Q9HD34 91 aa19.59■□□□□ 0.73
NEDD8-201ENST00000250495 HPF1Q9NWY4 346 aa19.59■□□□□ 0.73
NEDD8-201ENST00000250495 COQ3Q9NZJ6 369 aa19.59■□□□□ 0.73
NEDD8-201ENST00000250495 KCMF1Q9P0J7 381 aa19.59■□□□□ 0.73
NEDD8-201ENST00000250495 MYOTQ9UBF9 498 aa19.59■□□□□ 0.73
NEDD8-201ENST00000250495 PPT2Q9UMR5 302 aa19.59■□□□□ 0.73
NEDD8-201ENST00000250495 SPACA6W5XKT8 324 aa19.59■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms