RNA–Protein interactions for RNA: ENST00000248139.7

RAB40C-201, Transcript of RAB40C, member RAS oncogene family, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RAB40C, Length 2,699 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-201ENST00000248139 PSD4Q8NDX1 1056 aa24.39■■□□□ 1.5
RAB40C-201ENST00000248139 ARRDC3Q96B67 414 aa24.39■■□□□ 1.5
RAB40C-201ENST00000248139 REPS1Q96D71 796 aa24.39■■□□□ 1.5
RAB40C-201ENST00000248139 METTL2AQ96IZ6 378 aaKnown RBP24.39■■□□□ 1.5
RAB40C-201ENST00000248139 WFDC6Q9BQY6 131 aa24.39■■□□□ 1.5
RAB40C-201ENST00000248139 EFCAB11Q9BUY7 163 aa24.39■■□□□ 1.5
RAB40C-201ENST00000248139 TM7SF3Q9NS93 570 aa24.39■■□□□ 1.5
RAB40C-201ENST00000248139 QPCTLQ9NXS2 382 aa24.39■■□□□ 1.5
RAB40C-201ENST00000248139 CAB39Q9Y376 341 aaPredicted RBP24.39■■□□□ 1.5
RAB40C-201ENST00000248139 SZT2Q5T011 3432 aa24.39■■□□□ 1.49
RAB40C-201ENST00000248139 A0A0G2JN53 185 aa24.39■■□□□ 1.49
RAB40C-201ENST00000248139 CXorf51AA0A1B0GTR3 108 aa24.39■■□□□ 1.49
RAB40C-201ENST00000248139 DSCR3O14972 297 aa24.39■■□□□ 1.49
RAB40C-201ENST00000248139 CD40LGP29965 261 aa24.39■■□□□ 1.49
RAB40C-201ENST00000248139 SLC6A11P48066 632 aa24.39■■□□□ 1.49
RAB40C-201ENST00000248139 PNLIPRP1P54315 467 aa24.39■■□□□ 1.49
RAB40C-201ENST00000248139 FADDQ13158 208 aa24.39■■□□□ 1.49
RAB40C-201ENST00000248139 DMC1Q14565 340 aa24.39■■□□□ 1.49
RAB40C-201ENST00000248139 PUM1Q14671 1186 aaKnown RBP eCLIP24.39■■□□□ 1.49
RAB40C-201ENST00000248139 ARMCX4Q5H9R4 360 aa24.39■■□□□ 1.49
RAB40C-201ENST00000248139 TRIM40Q6P9F5 258 aa24.39■■□□□ 1.49
RAB40C-201ENST00000248139 KLHDC8AQ8IYD2 350 aa24.39■■□□□ 1.49
RAB40C-201ENST00000248139 COQ10AQ96MF6 247 aa24.39■■□□□ 1.49
RAB40C-201ENST00000248139 IL4I1Q96RQ9 567 aa24.39■■□□□ 1.49
RAB40C-201ENST00000248139 CCDC177Q9NQR7 707 aaPredicted RBP24.39■■□□□ 1.49
RAB40C-201ENST00000248139 ITM2CQ9NQX7 267 aa24.39■■□□□ 1.49
RAB40C-201ENST00000248139 POFUT2Q9Y2G5 429 aa24.39■■□□□ 1.49
RAB40C-201ENST00000248139 FEZF1A0PJY2 475 aa24.38■■□□□ 1.49
RAB40C-201ENST00000248139 SOX14O95416 240 aa24.38■■□□□ 1.49
RAB40C-201ENST00000248139 GABRB1P18505 474 aa24.38■■□□□ 1.49
RAB40C-201ENST00000248139 GTF2E2P29084 291 aaKnown RBP24.38■■□□□ 1.49
RAB40C-201ENST00000248139 PDE7AQ13946 482 aa24.38■■□□□ 1.49
RAB40C-201ENST00000248139 ARHGAP15Q53QZ3 475 aa24.38■■□□□ 1.49
RAB40C-201ENST00000248139 KIAA0907Q7Z7F0 614 aaPredicted RBP24.38■■□□□ 1.49
RAB40C-201ENST00000248139 RBM45Q8IUH3 476 aaKnown RBP24.38■■□□□ 1.49
RAB40C-201ENST00000248139 FAM83FQ8NEG4 500 aaPredicted RBP24.38■■□□□ 1.49
RAB40C-201ENST00000248139 MYDGFQ969H8 173 aa24.38■■□□□ 1.49
RAB40C-201ENST00000248139 F2RL3Q96RI0 385 aa24.38■■□□□ 1.49
RAB40C-201ENST00000248139 WASHC1A8K0Z3 465 aa24.38■■□□□ 1.49
RAB40C-201ENST00000248139 LZTS3O60299 673 aaPredicted RBP24.38■■□□□ 1.49
RAB40C-201ENST00000248139 DPM1O60762 260 aa24.38■■□□□ 1.49
RAB40C-201ENST00000248139 STATHP02808 62 aa24.38■■□□□ 1.49
RAB40C-201ENST00000248139 C6P13671 934 aa24.38■■□□□ 1.49
RAB40C-201ENST00000248139 ANXA8P13928 327 aa24.38■■□□□ 1.49
RAB40C-201ENST00000248139 CEBPBP17676 345 aa24.38■■□□□ 1.49
RAB40C-201ENST00000248139 PSMB5P28074 263 aa24.38■■□□□ 1.49
RAB40C-201ENST00000248139 VIPR2P41587 438 aa24.38■■□□□ 1.49
RAB40C-201ENST00000248139 XCR1P46094 333 aa24.38■■□□□ 1.49
RAB40C-201ENST00000248139 PCDH1Q08174 1060 aa24.38■■□□□ 1.49
RAB40C-201ENST00000248139 E2F2Q14209 437 aa24.38■■□□□ 1.49
RAB40C-201ENST00000248139 CEACAM20Q6UY09 585 aa24.38■■□□□ 1.49
RAB40C-201ENST00000248139 WASH2PQ6VEQ5 465 aa24.38■■□□□ 1.49
RAB40C-201ENST00000248139 PLA2G15Q8NCC3 412 aa24.38■■□□□ 1.49
RAB40C-201ENST00000248139 OTUB1Q96FW1 271 aaPredicted RBP24.38■■□□□ 1.49
RAB40C-201ENST00000248139 ZDHHC5Q9C0B5 715 aa24.38■■□□□ 1.49
RAB40C-201ENST00000248139 ZNF556Q9HAH1 456 aa24.38■■□□□ 1.49
RAB40C-201ENST00000248139 FAM32AQ9Y421 112 aaKnown RBP24.38■■□□□ 1.49
RAB40C-201ENST00000248139 FOXE1O00358 373 aaPredicted RBP24.38■■□□□ 1.49
RAB40C-201ENST00000248139 FFAR1O14842 300 aa24.38■■□□□ 1.49
RAB40C-201ENST00000248139 TBX6O95947 436 aaPredicted RBP24.38■■□□□ 1.49
RAB40C-201ENST00000248139 BCHEP06276 602 aa24.38■■□□□ 1.49
RAB40C-201ENST00000248139 GRK3P35626 688 aa24.38■■□□□ 1.49
RAB40C-201ENST00000248139 LIM2P55344 173 aa24.38■■□□□ 1.49
RAB40C-201ENST00000248139 FCHO2Q0JRZ9 810 aa24.38■■□□□ 1.49
RAB40C-201ENST00000248139 CNTN1Q12860 1018 aa24.38■■□□□ 1.49
RAB40C-201ENST00000248139 ZNF404Q494X3 552 aa24.38■■□□□ 1.49
RAB40C-201ENST00000248139 TMIGD1Q6UXZ0 262 aa24.38■■□□□ 1.49
RAB40C-201ENST00000248139 PLEKHG7Q6ZR37 379 aa24.38■■□□□ 1.49
RAB40C-201ENST00000248139 SLC46A3Q7Z3Q1 461 aa24.38■■□□□ 1.49
RAB40C-201ENST00000248139 WDR53Q7Z5U6 358 aaPredicted RBP24.38■■□□□ 1.49
RAB40C-201ENST00000248139 ADGRF3Q8IZF5 1079 aa24.38■■□□□ 1.49
RAB40C-201ENST00000248139 METTL4Q8N3J2 472 aa24.38■■□□□ 1.49
RAB40C-201ENST00000248139 OXR1Q8N573 874 aa24.38■■□□□ 1.49
RAB40C-201ENST00000248139 NUS1Q96E22 293 aa24.38■■□□□ 1.49
RAB40C-201ENST00000248139 PIP5K1AQ99755 562 aa24.38■■□□□ 1.49
RAB40C-201ENST00000248139 C11orf16Q9NQ32 467 aa24.38■■□□□ 1.49
RAB40C-201ENST00000248139 CUEDC1Q9NWM3 386 aaPredicted RBP24.38■■□□□ 1.49
RAB40C-201ENST00000248139 ZNF229Q9UJW7 825 aa24.38■■□□□ 1.49
RAB40C-201ENST00000248139 ALPK3Q96L96 1907 aa24.37■■□□□ 1.49
RAB40C-201ENST00000248139 TRBV4-1A0A0J9YWV2 114 aa24.37■■□□□ 1.49
RAB40C-201ENST00000248139 ANKDD1BA6NHY2 528 aa24.37■■□□□ 1.49
RAB40C-201ENST00000248139 VEGFBP49765 207 aa24.37■■□□□ 1.49
RAB40C-201ENST00000248139 COL9A2Q14055 689 aaPredicted RBP24.37■■□□□ 1.49
RAB40C-201ENST00000248139 MED22Q15528 200 aa24.37■■□□□ 1.49
RAB40C-201ENST00000248139 TBCEQ15813 527 aaPredicted RBP24.37■■□□□ 1.49
RAB40C-201ENST00000248139 HORMAD2Q8N7B1 307 aa24.37■■□□□ 1.49
RAB40C-201ENST00000248139 HPS1Q92902 700 aa24.37■■□□□ 1.49
RAB40C-201ENST00000248139 NFKBIL1Q9UBC1 381 aaPredicted RBP24.37■■□□□ 1.49
RAB40C-201ENST00000248139 OTOL1A6NHN0 477 aaPredicted RBP24.37■■□□□ 1.49
RAB40C-201ENST00000248139 CYP17A1P05093 508 aa24.37■■□□□ 1.49
RAB40C-201ENST00000248139 ST8SIA6P61647 398 aa24.37■■□□□ 1.49
RAB40C-201ENST00000248139 HSPB3Q12988 150 aa24.37■■□□□ 1.49
RAB40C-201ENST00000248139 C10orf62Q5T681 223 aaPredicted RBP24.37■■□□□ 1.49
RAB40C-201ENST00000248139 BCDIN3DQ7Z5W3 292 aaKnown RBP24.37■■□□□ 1.49
RAB40C-201ENST00000248139 VANGL1Q8TAA9 524 aaPredicted RBP24.37■■□□□ 1.49
RAB40C-201ENST00000248139 MYNNQ9NPC7 610 aa24.37■■□□□ 1.49
RAB40C-201ENST00000248139 SLC23A2Q9UGH3 650 aa24.37■■□□□ 1.49
RAB40C-201ENST00000248139 MTCL1Q9Y4B5 1905 aaKnown RBP24.36■■□□□ 1.49
RAB40C-201ENST00000248139 SEMA7AO75326 666 aa24.36■■□□□ 1.49
RAB40C-201ENST00000248139 CISD3P0C7P0 127 aa24.36■■□□□ 1.49
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms