RNA–Protein interactions for RNA: ENST00000243082.4

HOXC11-201, Transcript of homeobox C11, humanhuman

TSL 3 BASIC

Gene HOXC11, Length 2,039 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC11-201ENST00000243082 SCARB2Q14108 478 aa17.59■□□□□ 0.41
HOXC11-201ENST00000243082 ZNF425Q6IV72 752 aa17.59■□□□□ 0.41
HOXC11-201ENST00000243082 CEP68Q76N32 757 aa17.59■□□□□ 0.41
HOXC11-201ENST00000243082 ARL10Q8N8L6 244 aa17.59■□□□□ 0.41
HOXC11-201ENST00000243082 FLCNQ8NFG4 579 aa17.59■□□□□ 0.41
HOXC11-201ENST00000243082 NFKBIDQ8NI38 313 aa17.59■□□□□ 0.41
HOXC11-201ENST00000243082 DOHHQ9BU89 302 aa17.59■□□□□ 0.41
HOXC11-201ENST00000243082 RAD21L1Q9H4I0 556 aa17.59■□□□□ 0.41
HOXC11-201ENST00000243082 LTB4R2Q9NPC1 389 aa17.59■□□□□ 0.41
HOXC11-201ENST00000243082 KLF15Q9UIH9 416 aa17.59■□□□□ 0.41
HOXC11-201ENST00000243082 KLHL20Q9Y2M5 609 aa17.59■□□□□ 0.41
HOXC11-201ENST00000243082 SNRNP200O75643 2136 aaKnown RBP17.58■□□□□ 0.41
HOXC11-201ENST00000243082 HS6ST1O60243 411 aa17.58■□□□□ 0.4
HOXC11-201ENST00000243082 RASGRP1O95267 797 aa17.58■□□□□ 0.4
HOXC11-201ENST00000243082 SEMA4FO95754 770 aa17.58■□□□□ 0.4
HOXC11-201ENST00000243082 AKT2P31751 481 aa17.58■□□□□ 0.4
HOXC11-201ENST00000243082 SLC19A1P41440 591 aa17.58■□□□□ 0.4
HOXC11-201ENST00000243082 SSR2P43308 183 aa17.58■□□□□ 0.4
HOXC11-201ENST00000243082 PRIM2P49643 509 aa17.58■□□□□ 0.4
HOXC11-201ENST00000243082 MANFP55145 182 aaKnown RBP17.58■□□□□ 0.4
HOXC11-201ENST00000243082 YPEL5P62699 121 aa17.58■□□□□ 0.4
HOXC11-201ENST00000243082 SELENOWP63302 87 aa17.58■□□□□ 0.4
HOXC11-201ENST00000243082 EPS8Q12929 822 aa17.58■□□□□ 0.4
HOXC11-201ENST00000243082 ALG11Q2TAA5 492 aa17.58■□□□□ 0.4
HOXC11-201ENST00000243082 NRROSQ86YC3 692 aa17.58■□□□□ 0.4
HOXC11-201ENST00000243082 DCP2Q8IU60 420 aaKnown RBP17.58■□□□□ 0.4
HOXC11-201ENST00000243082 ZFP28Q8NHY6 868 aa17.58■□□□□ 0.4
HOXC11-201ENST00000243082 MS4A6EQ96DS6 147 aa17.58■□□□□ 0.4
HOXC11-201ENST00000243082 TSC22D3Q99576 134 aa17.58■□□□□ 0.4
HOXC11-201ENST00000243082 GABARAPL1Q9H0R8 117 aa17.58■□□□□ 0.4
HOXC11-201ENST00000243082 RBM38Q9H0Z9 239 aaKnown RBP17.58■□□□□ 0.4
HOXC11-201ENST00000243082 SNX8Q9Y5X2 465 aa17.58■□□□□ 0.4
HOXC11-201ENST00000243082 HS3ST3A1Q9Y663 406 aa17.58■□□□□ 0.4
HOXC11-201ENST00000243082 DGKBQ9Y6T7 804 aa17.58■□□□□ 0.4
HOXC11-201ENST00000243082 TRBV23OR9-2A0A075B6M9 112 aa17.57■□□□□ 0.4
HOXC11-201ENST00000243082 ISM1B1AKI9 464 aa17.57■□□□□ 0.4
HOXC11-201ENST00000243082 AXIN1O15169 862 aa17.57■□□□□ 0.4
HOXC11-201ENST00000243082 GSTM2P28161 218 aa17.57■□□□□ 0.4
HOXC11-201ENST00000243082 PIGAP37287 484 aa17.57■□□□□ 0.4
HOXC11-201ENST00000243082 ALDH3B2P48448 385 aa17.57■□□□□ 0.4
HOXC11-201ENST00000243082 KCNAB2Q13303 367 aa17.57■□□□□ 0.4
HOXC11-201ENST00000243082 TTC23Q5W5X9 447 aa17.57■□□□□ 0.4
HOXC11-201ENST00000243082 RBM44Q6ZP01 1051 aaKnown RBP17.57■□□□□ 0.4
HOXC11-201ENST00000243082 Q6ZSR6 202 aa17.57■□□□□ 0.4
HOXC11-201ENST00000243082 TMEM26Q6ZUK4 368 aa17.57■□□□□ 0.4
HOXC11-201ENST00000243082 CCDC80Q76M96 950 aa17.57■□□□□ 0.4
HOXC11-201ENST00000243082 EXOSC8Q96B26 276 aaKnown RBP17.57■□□□□ 0.4
HOXC11-201ENST00000243082 DGCR14Q96DF8 476 aaKnown RBP17.57■□□□□ 0.4
HOXC11-201ENST00000243082 NLNQ9BYT8 704 aa17.57■□□□□ 0.4
HOXC11-201ENST00000243082 C6orf106Q9H6K1 298 aaPredicted RBP17.57■□□□□ 0.4
HOXC11-201ENST00000243082 PRDM7Q9NQW5 492 aa17.57■□□□□ 0.4
HOXC11-201ENST00000243082 TUBA8Q9NY65 449 aaPredicted RBP17.57■□□□□ 0.4
HOXC11-201ENST00000243082 TAS2R7Q9NYW3 318 aa17.57■□□□□ 0.4
HOXC11-201ENST00000243082 BAG5Q9UL15 447 aa17.57■□□□□ 0.4
HOXC11-201ENST00000243082 PCDHGA4Q9Y5G9 962 aa17.57■□□□□ 0.4
HOXC11-201ENST00000243082 SNX11Q9Y5W9 270 aa17.57■□□□□ 0.4
HOXC11-201ENST00000243082 BTN3A3O00478 584 aa17.57■□□□□ 0.4
HOXC11-201ENST00000243082 VILLO15195 856 aa17.57■□□□□ 0.4
HOXC11-201ENST00000243082 MBTPS2O43462 519 aa17.57■□□□□ 0.4
HOXC11-201ENST00000243082 BMP10O95393 424 aa17.57■□□□□ 0.4
HOXC11-201ENST00000243082 ARAFP10398 606 aa17.57■□□□□ 0.4
HOXC11-201ENST00000243082 DNAJA1P31689 397 aaKnown RBP17.57■□□□□ 0.4
HOXC11-201ENST00000243082 ITGA1P56199 1179 aa17.57■□□□□ 0.4
HOXC11-201ENST00000243082 CDK6Q00534 326 aa17.57■□□□□ 0.4
HOXC11-201ENST00000243082 LAPTM4AQ15012 233 aa17.57■□□□□ 0.4
HOXC11-201ENST00000243082 ZNF630Q2M218 657 aaPredicted RBP17.57■□□□□ 0.4
HOXC11-201ENST00000243082 SAXO2Q658L1 398 aa17.57■□□□□ 0.4
HOXC11-201ENST00000243082 ABHD17CQ6PCB6 329 aa17.57■□□□□ 0.4
HOXC11-201ENST00000243082 Q6ZS52 159 aa17.57■□□□□ 0.4
HOXC11-201ENST00000243082 TSEN54Q7Z6J9 526 aaKnown RBP17.57■□□□□ 0.4
HOXC11-201ENST00000243082 NEURL3Q96EH8 262 aa17.57■□□□□ 0.4
HOXC11-201ENST00000243082 YTHDF1Q9BYJ9 559 aaKnown RBP17.57■□□□□ 0.4
HOXC11-201ENST00000243082 SIRT3Q9NTG7 399 aaPredicted RBP17.57■□□□□ 0.4
HOXC11-201ENST00000243082 NDRG2Q9UN36 371 aaKnown RBP17.57■□□□□ 0.4
HOXC11-201ENST00000243082 SNX7Q9UNH6 387 aa17.57■□□□□ 0.4
HOXC11-201ENST00000243082 A0A087WXM4 84 aa17.56■□□□□ 0.4
HOXC11-201ENST00000243082 MYO1GB0I1T2 1018 aa17.56■□□□□ 0.4
HOXC11-201ENST00000243082 DPM1O60762 260 aa17.56■□□□□ 0.4
HOXC11-201ENST00000243082 OPN1SWP03999 348 aa17.56■□□□□ 0.4
HOXC11-201ENST00000243082 IGHV4-34P06331 123 aa17.56■□□□□ 0.4
HOXC11-201ENST00000243082 F3P13726 295 aa17.56■□□□□ 0.4
HOXC11-201ENST00000243082 DDX5P17844 614 aaKnown RBP17.56■□□□□ 0.4
HOXC11-201ENST00000243082 FPR1P21462 350 aa17.56■□□□□ 0.4
HOXC11-201ENST00000243082 NDUFAF5Q5TEU4 345 aa17.56■□□□□ 0.4
HOXC11-201ENST00000243082 CYP4Z1Q86W10 505 aa17.56■□□□□ 0.4
HOXC11-201ENST00000243082 ZC3H7AQ8IWR0 971 aaKnown RBP17.56■□□□□ 0.4
HOXC11-201ENST00000243082 MFSD9Q8NBP5 474 aa17.56■□□□□ 0.4
HOXC11-201ENST00000243082 TAMM41Q96BW9 452 aa17.56■□□□□ 0.4
HOXC11-201ENST00000243082 TRNAU1APQ9NX07 287 aaKnown RBP17.56■□□□□ 0.4
HOXC11-201ENST00000243082 C3orf18Q9UK00 162 aa17.56■□□□□ 0.4
HOXC11-201ENST00000243082 PADI2Q9Y2J8 665 aa17.56■□□□□ 0.4
HOXC11-201ENST00000243082 M0QX08 132 aa17.55■□□□□ 0.4
HOXC11-201ENST00000243082 ERI3O43414 337 aaKnown RBP17.55■□□□□ 0.4
HOXC11-201ENST00000243082 B4GALT2O60909 372 aa17.55■□□□□ 0.4
HOXC11-201ENST00000243082 DRD2P14416 443 aa17.55■□□□□ 0.4
HOXC11-201ENST00000243082 PCBP3P57721 371 aaKnown RBP17.55■□□□□ 0.4
HOXC11-201ENST00000243082 ELOAQ14241 798 aaKnown RBP17.55■□□□□ 0.4
HOXC11-201ENST00000243082 ZC3H12BQ5HYM0 836 aaKnown RBP17.55■□□□□ 0.4
HOXC11-201ENST00000243082 CRB2Q5IJ48 1285 aa17.55■□□□□ 0.4
HOXC11-201ENST00000243082 PAQR7Q86WK9 346 aa17.55■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 145.2 ms