RNA–Protein interactions for RNA: ENST00000233146.6

MSH2-201, Transcript of mutS homolog 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MSH2, Length 3,307 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH2-201ENST00000233146 MMP12P39900 470 aa12.49□□□□□ -0.41
MSH2-201ENST00000233146 PIK3CGP48736 1102 aa12.49□□□□□ -0.41
MSH2-201ENST00000233146 PSMD4P55036 377 aaKnown RBP12.49□□□□□ -0.41
MSH2-201ENST00000233146 SPHARQ15513 63 aa12.49□□□□□ -0.41
MSH2-201ENST00000233146 MAPKAPK3Q16644 382 aa12.49□□□□□ -0.41
MSH2-201ENST00000233146 OR7E24Q6IFN5 339 aa12.49□□□□□ -0.41
MSH2-201ENST00000233146 TMEM143Q96AN5 459 aa12.49□□□□□ -0.41
MSH2-201ENST00000233146 DDX31Q9H8H2 851 aaKnown RBP12.49□□□□□ -0.41
MSH2-201ENST00000233146 NUDT15Q9NV35 164 aa12.49□□□□□ -0.41
MSH2-201ENST00000233146 SIX4Q9UIU6 781 aa12.49□□□□□ -0.41
MSH2-201ENST00000233146 HCN2Q9UL51 889 aa12.49□□□□□ -0.41
MSH2-201ENST00000233146 PCDHA10Q9Y5I2 948 aa12.49□□□□□ -0.41
MSH2-201ENST00000233146 ZNF729A6NN14 1252 aaPredicted RBP12.48□□□□□ -0.41
MSH2-201ENST00000233146 SULT1C2O00338 296 aa12.48□□□□□ -0.41
MSH2-201ENST00000233146 OGNP20774 298 aaKnown RBP12.48□□□□□ -0.41
MSH2-201ENST00000233146 ACLYP53396 1101 aa12.48□□□□□ -0.41
MSH2-201ENST00000233146 DHODHQ02127 395 aa12.48□□□□□ -0.41
MSH2-201ENST00000233146 CCDC85BQ15834 202 aaPredicted RBP12.48□□□□□ -0.41
MSH2-201ENST00000233146 UGT8Q16880 541 aa12.48□□□□□ -0.41
MSH2-201ENST00000233146 SPIN4Q56A73 249 aa12.48□□□□□ -0.41
MSH2-201ENST00000233146 RBMS3Q6XE24 437 aaKnown RBP12.48□□□□□ -0.41
MSH2-201ENST00000233146 PIM3Q86V86 326 aa12.48□□□□□ -0.41
MSH2-201ENST00000233146 FAM131BQ86XD5 332 aa12.48□□□□□ -0.41
MSH2-201ENST00000233146 MICALL2Q8IY33 904 aa12.48□□□□□ -0.41
MSH2-201ENST00000233146 GPR150Q8NGU9 434 aa12.48□□□□□ -0.41
MSH2-201ENST00000233146 ZDHHC1Q8WTX9 485 aa12.48□□□□□ -0.41
MSH2-201ENST00000233146 BBS4Q96RK4 519 aa12.48□□□□□ -0.41
MSH2-201ENST00000233146 ATOH8Q96SQ7 321 aa12.48□□□□□ -0.41
MSH2-201ENST00000233146 PARK7Q99497 189 aaKnown RBP12.48□□□□□ -0.41
MSH2-201ENST00000233146 EPYCQ99645 322 aa12.48□□□□□ -0.41
MSH2-201ENST00000233146 SPOCK3Q9BQ16 436 aa12.48□□□□□ -0.41
MSH2-201ENST00000233146 RNF19AQ9NV58 838 aa12.48□□□□□ -0.41
MSH2-201ENST00000233146 IMPAD1Q9NX62 359 aa12.48□□□□□ -0.41
MSH2-201ENST00000233146 LOC105369274A0A096LPK9 316 aa12.48□□□□□ -0.41
MSH2-201ENST00000233146 A0A0U1RQF3 1178 aa12.48□□□□□ -0.41
MSH2-201ENST00000233146 PSMD3O43242 534 aa12.48□□□□□ -0.41
MSH2-201ENST00000233146 DPM1O60762 260 aa12.48□□□□□ -0.41
MSH2-201ENST00000233146 TOXO94900 526 aa12.48□□□□□ -0.41
MSH2-201ENST00000233146 CKMT1AP12532 417 aa12.48□□□□□ -0.41
MSH2-201ENST00000233146 CXCL2P19875 107 aa12.48□□□□□ -0.41
MSH2-201ENST00000233146 AKT1P31749 480 aa12.48□□□□□ -0.41
MSH2-201ENST00000233146 GPR143P51810 404 aa12.48□□□□□ -0.41
MSH2-201ENST00000233146 EXOC3L2Q2M3D2 409 aa12.48□□□□□ -0.41
MSH2-201ENST00000233146 MSANTD2Q6P1R3 559 aa12.48□□□□□ -0.41
MSH2-201ENST00000233146 TMEM91Q6ZNR0 172 aa12.48□□□□□ -0.41
MSH2-201ENST00000233146 OR4N4Q8N0Y3 316 aa12.48□□□□□ -0.41
MSH2-201ENST00000233146 PLA2G15Q8NCC3 412 aa12.48□□□□□ -0.41
MSH2-201ENST00000233146 CRB3Q9BUF7 120 aa12.48□□□□□ -0.41
MSH2-201ENST00000233146 DUSP12Q9UNI6 340 aa12.48□□□□□ -0.41
MSH2-201ENST00000233146 TEX13CA0A0J9YWL9 993 aa12.47□□□□□ -0.41
MSH2-201ENST00000233146 M0R129 80 aa12.47□□□□□ -0.41
MSH2-201ENST00000233146 FFAR3O14843 346 aa12.47□□□□□ -0.41
MSH2-201ENST00000233146 GPR42O15529 346 aa12.47□□□□□ -0.41
MSH2-201ENST00000233146 OR1I1O60431 355 aa12.47□□□□□ -0.41
MSH2-201ENST00000233146 CXCL14O95715 111 aa12.47□□□□□ -0.41
MSH2-201ENST00000233146 SPI1P17947 270 aa12.47□□□□□ -0.41
MSH2-201ENST00000233146 STK19P49842 368 aaPredicted RBP12.47□□□□□ -0.41
MSH2-201ENST00000233146 TSPAN5P62079 268 aa12.47□□□□□ -0.41
MSH2-201ENST00000233146 SOX4Q06945 474 aaPredicted RBP12.47□□□□□ -0.41
MSH2-201ENST00000233146 ITPK1Q13572 414 aa12.47□□□□□ -0.41
MSH2-201ENST00000233146 GOLGA7BQ2TAP0 167 aa12.47□□□□□ -0.41
MSH2-201ENST00000233146 PKDCCQ504Y2 493 aa12.47□□□□□ -0.41
MSH2-201ENST00000233146 C22orf42Q6IC83 251 aa12.47□□□□□ -0.41
MSH2-201ENST00000233146 AFTPHQ6ULP2 937 aa12.47□□□□□ -0.41
MSH2-201ENST00000233146 RYBPQ8N488 228 aaPredicted RBP12.47□□□□□ -0.41
MSH2-201ENST00000233146 BMPERQ8N8U9 685 aa12.47□□□□□ -0.41
MSH2-201ENST00000233146 ADAMTS19Q8TE59 1207 aa12.47□□□□□ -0.41
MSH2-201ENST00000233146 RAB7BQ96AH8 199 aa12.47□□□□□ -0.41
MSH2-201ENST00000233146 FAM167AQ96KS9 214 aa12.47□□□□□ -0.41
MSH2-201ENST00000233146 TBL1YQ9BQ87 522 aa12.47□□□□□ -0.41
MSH2-201ENST00000233146 TMPRSS4Q9NRS4 437 aa12.47□□□□□ -0.41
MSH2-201ENST00000233146 HAS3O00219 553 aa12.47□□□□□ -0.41
MSH2-201ENST00000233146 SDC3O75056 442 aa12.47□□□□□ -0.41
MSH2-201ENST00000233146 KLK3P07288 261 aaPredicted RBP12.47□□□□□ -0.41
MSH2-201ENST00000233146 PIPP12273 146 aaPredicted RBP12.47□□□□□ -0.41
MSH2-201ENST00000233146 HPGDP15428 266 aa12.47□□□□□ -0.41
MSH2-201ENST00000233146 SMPD1P17405 629 aa12.47□□□□□ -0.41
MSH2-201ENST00000233146 HOXA6P31267 233 aa12.47□□□□□ -0.41
MSH2-201ENST00000233146 BDKRB1P46663 353 aa12.47□□□□□ -0.41
MSH2-201ENST00000233146 ZP1P60852 638 aa12.47□□□□□ -0.41
MSH2-201ENST00000233146 PURAQ00577 322 aaKnown RBP12.47□□□□□ -0.41
MSH2-201ENST00000233146 NRG1Q02297 640 aaPredicted RBP12.47□□□□□ -0.41
MSH2-201ENST00000233146 STX4Q12846 297 aa12.47□□□□□ -0.41
MSH2-201ENST00000233146 MAP4K2Q12851 820 aa12.47□□□□□ -0.41
MSH2-201ENST00000233146 SOWAHAQ2M3V2 549 aa12.47□□□□□ -0.41
MSH2-201ENST00000233146 SLC39A12Q504Y0 691 aa12.47□□□□□ -0.41
MSH2-201ENST00000233146 USP39Q53GS9 565 aaKnown RBP12.47□□□□□ -0.41
MSH2-201ENST00000233146 B3GNTL1Q67FW5 361 aaPredicted RBP12.47□□□□□ -0.41
MSH2-201ENST00000233146 ALKAL2Q6UX46 152 aa12.47□□□□□ -0.41
MSH2-201ENST00000233146 GPR142Q7Z601 462 aa12.47□□□□□ -0.41
MSH2-201ENST00000233146 PNPLA1Q8N8W4 532 aa12.47□□□□□ -0.41
MSH2-201ENST00000233146 RHEBL1Q8TAI7 183 aa12.47□□□□□ -0.41
MSH2-201ENST00000233146 CLEC4CQ8WTT0 213 aa12.47□□□□□ -0.41
MSH2-201ENST00000233146 MASTLQ96GX5 879 aa12.47□□□□□ -0.41
MSH2-201ENST00000233146 TCF25Q9BQ70 676 aa12.47□□□□□ -0.41
MSH2-201ENST00000233146 CPPED1Q9BRF8 314 aaPredicted RBP12.47□□□□□ -0.41
MSH2-201ENST00000233146 SEBOXQ9HB31 216 aaPredicted RBP12.47□□□□□ -0.41
MSH2-201ENST00000233146 STARD7Q9NQZ5 370 aa12.47□□□□□ -0.41
MSH2-201ENST00000233146 SLC6A13Q9NSD5 602 aa12.47□□□□□ -0.41
MSH2-201ENST00000233146 CLEC2DQ9UHP7 191 aa12.47□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms