RNA–Protein interactions for RNA: ENST00000228827.7

GPN3-201, Transcript of GPN-loop GTPase 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GPN3, Length 1,468 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPN3-201ENST00000228827 KCNC2Q96PR1 638 aa13.29□□□□□ -0.28
GPN3-201ENST00000228827 MAPKAP1Q9BPZ7 522 aa13.29□□□□□ -0.28
GPN3-201ENST00000228827 SORBS1Q9BX66 1292 aaKnown RBP13.29□□□□□ -0.28
GPN3-201ENST00000228827 FUT8Q9BYC5 575 aa13.29□□□□□ -0.28
GPN3-201ENST00000228827 TSPYL1Q9H0U9 437 aa13.29□□□□□ -0.28
GPN3-201ENST00000228827 ACTR8Q9H981 624 aa13.29□□□□□ -0.28
GPN3-201ENST00000228827 LRFN1Q9P244 771 aa13.29□□□□□ -0.28
GPN3-201ENST00000228827 FBXW2Q9UKT8 454 aa13.29□□□□□ -0.28
GPN3-201ENST00000228827 CLDN16Q9Y5I7 305 aa13.29□□□□□ -0.28
GPN3-201ENST00000228827 IKBKGQ9Y6K9 419 aa13.29□□□□□ -0.28
GPN3-201ENST00000228827 DOCK10Q96BY6 2186 aa13.29□□□□□ -0.28
GPN3-201ENST00000228827 UTP20O75691 2785 aaKnown RBP13.29□□□□□ -0.28
GPN3-201ENST00000228827 LRRK2Q5S007 2527 aa13.29□□□□□ -0.28
GPN3-201ENST00000228827 WISP2O76076 250 aa13.29□□□□□ -0.28
GPN3-201ENST00000228827 UNC5CO95185 931 aa13.29□□□□□ -0.28
GPN3-201ENST00000228827 SIX3O95343 332 aaPredicted RBP13.29□□□□□ -0.28
GPN3-201ENST00000228827 CLDN1O95832 211 aa13.29□□□□□ -0.28
GPN3-201ENST00000228827 IFNA16P05015 189 aa13.29□□□□□ -0.28
GPN3-201ENST00000228827 ATP5A1P25705 553 aaKnown RBP13.29□□□□□ -0.28
GPN3-201ENST00000228827 SSR2P43308 183 aa13.29□□□□□ -0.28
GPN3-201ENST00000228827 CLCN2P51788 898 aa13.29□□□□□ -0.28
GPN3-201ENST00000228827 ALDH18A1P54886 795 aaKnown RBP13.29□□□□□ -0.28
GPN3-201ENST00000228827 MLF1P58340 268 aa13.29□□□□□ -0.28
GPN3-201ENST00000228827 E2F2Q14209 437 aa13.29□□□□□ -0.28
GPN3-201ENST00000228827 RCN2Q14257 317 aa13.29□□□□□ -0.28
GPN3-201ENST00000228827 AP5B1Q2VPB7 878 aa13.29□□□□□ -0.28
GPN3-201ENST00000228827 C1QL3Q5VWW1 255 aa13.29□□□□□ -0.28
GPN3-201ENST00000228827 GRHL2Q6ISB3 625 aa13.29□□□□□ -0.28
GPN3-201ENST00000228827 CHSY3Q70JA7 882 aa13.29□□□□□ -0.28
GPN3-201ENST00000228827 GOLGA7Q7Z5G4 137 aa13.29□□□□□ -0.28
GPN3-201ENST00000228827 ZNF595Q8IYB9 648 aa13.29□□□□□ -0.28
GPN3-201ENST00000228827 LGI4Q8N135 537 aa13.29□□□□□ -0.28
GPN3-201ENST00000228827 APCDD1LQ8NCL9 501 aa13.29□□□□□ -0.28
GPN3-201ENST00000228827 SRFBP1Q8NEF9 429 aaKnown RBP13.29□□□□□ -0.28
GPN3-201ENST00000228827 B3GNT7Q8NFL0 401 aa13.29□□□□□ -0.28
GPN3-201ENST00000228827 DNAJB8Q8NHS0 232 aa13.29□□□□□ -0.28
GPN3-201ENST00000228827 SCYL1Q96KG9 808 aa13.29□□□□□ -0.28
GPN3-201ENST00000228827 MTERF1Q99551 399 aaKnown RBP13.29□□□□□ -0.28
GPN3-201ENST00000228827 TBCDQ9BTW9 1192 aa13.29□□□□□ -0.28
GPN3-201ENST00000228827 ROGDIQ9GZN7 287 aa13.29□□□□□ -0.28
GPN3-201ENST00000228827 SEC14L3Q9UDX4 400 aa13.29□□□□□ -0.28
GPN3-201ENST00000228827 USP9XQ93008 2570 aaPredicted RBP13.29□□□□□ -0.28
GPN3-201ENST00000228827 WIPF3A6NGB9 483 aa13.28□□□□□ -0.28
GPN3-201ENST00000228827 KIF2AO00139 706 aaPredicted RBP13.28□□□□□ -0.28
GPN3-201ENST00000228827 KLK8O60259 260 aa13.28□□□□□ -0.28
GPN3-201ENST00000228827 LDB3O75112 727 aa13.28□□□□□ -0.28
GPN3-201ENST00000228827 NEURL1O76050 574 aa13.28□□□□□ -0.28
GPN3-201ENST00000228827 SP1P08047 785 aa13.28□□□□□ -0.28
GPN3-201ENST00000228827 HIST1H1TP22492 207 aaPredicted RBP13.28□□□□□ -0.28
GPN3-201ENST00000228827 EEF1DP29692 281 aaKnown RBP13.28□□□□□ -0.28
GPN3-201ENST00000228827 RAP1GDS1P52306 607 aa13.28□□□□□ -0.28
GPN3-201ENST00000228827 ID2Q02363 134 aa13.28□□□□□ -0.28
GPN3-201ENST00000228827 STX4Q12846 297 aa13.28□□□□□ -0.28
GPN3-201ENST00000228827 GTF2H2Q13888 395 aa13.28□□□□□ -0.28
GPN3-201ENST00000228827 MAPKAPK3Q16644 382 aa13.28□□□□□ -0.28
GPN3-201ENST00000228827 TMEM35AQ53FP2 167 aa13.28□□□□□ -0.28
GPN3-201ENST00000228827 TECRLQ5HYJ1 363 aa13.28□□□□□ -0.28
GPN3-201ENST00000228827 KHDRBS2Q5VWX1 349 aaKnown RBP13.28□□□□□ -0.28
GPN3-201ENST00000228827 SLC25A25Q6KCM7 469 aa13.28□□□□□ -0.28
GPN3-201ENST00000228827 GTF2H2CQ6P1K8 395 aa13.28□□□□□ -0.28
GPN3-201ENST00000228827 TAOK1Q7L7X3 1001 aa13.28□□□□□ -0.28
GPN3-201ENST00000228827 GALNTL5Q7Z4T8 443 aa13.28□□□□□ -0.28
GPN3-201ENST00000228827 FJX1Q86VR8 437 aa13.28□□□□□ -0.28
GPN3-201ENST00000228827 HORMAD2Q8N7B1 307 aa13.28□□□□□ -0.28
GPN3-201ENST00000228827 PTGR2Q8N8N7 351 aaPredicted RBP13.28□□□□□ -0.28
GPN3-201ENST00000228827 ACOT4Q8N9L9 421 aa13.28□□□□□ -0.28
GPN3-201ENST00000228827 HUS1BQ8NHY5 278 aa13.28□□□□□ -0.28
GPN3-201ENST00000228827 KIF18AQ8NI77 898 aa13.28□□□□□ -0.28
GPN3-201ENST00000228827 PHF21BQ96EK2 531 aa13.28□□□□□ -0.28
GPN3-201ENST00000228827 CMTM7Q96FZ5 175 aa13.28□□□□□ -0.28
GPN3-201ENST00000228827 SCMH1Q96GD3 660 aa13.28□□□□□ -0.28
GPN3-201ENST00000228827 ALOXE3Q9BYJ1 711 aa13.28□□□□□ -0.28
GPN3-201ENST00000228827 TSPAN10Q9H1Z9 355 aaPredicted RBP13.28□□□□□ -0.28
GPN3-201ENST00000228827 IPPKQ9H8X2 491 aa13.28□□□□□ -0.28
GPN3-201ENST00000228827 DMRT3Q9NQL9 472 aa13.28□□□□□ -0.28
GPN3-201ENST00000228827 KCMF1Q9P0J7 381 aa13.28□□□□□ -0.28
GPN3-201ENST00000228827 ZNF223Q9UK11 482 aaPredicted RBP13.28□□□□□ -0.28
GPN3-201ENST00000228827 NFU1Q9UMS0 254 aa13.28□□□□□ -0.28
GPN3-201ENST00000228827 PTPN13Q12923 2485 aa13.27□□□□□ -0.28
GPN3-201ENST00000228827 A0A087WUV0 522 aaPredicted RBP13.27□□□□□ -0.29
GPN3-201ENST00000228827 CCDC189A1A4V9 331 aa13.27□□□□□ -0.29
GPN3-201ENST00000228827 TRIM49D1C9J1S8 452 aa13.27□□□□□ -0.29
GPN3-201ENST00000228827 FCHO1O14526 889 aa13.27□□□□□ -0.29
GPN3-201ENST00000228827 CTNSO60931 367 aa13.27□□□□□ -0.29
GPN3-201ENST00000228827 SLC25A12O75746 678 aa13.27□□□□□ -0.29
GPN3-201ENST00000228827 KRT38O76015 456 aa13.27□□□□□ -0.29
GPN3-201ENST00000228827 TUBB4AP04350 444 aa13.27□□□□□ -0.29
GPN3-201ENST00000228827 STSP08842 583 aa13.27□□□□□ -0.29
GPN3-201ENST00000228827 CPN2P22792 545 aa13.27□□□□□ -0.29
GPN3-201ENST00000228827 COL8A1P27658 744 aa13.27□□□□□ -0.29
GPN3-201ENST00000228827 SERPINB1P30740 379 aa13.27□□□□□ -0.29
GPN3-201ENST00000228827 ARL1P40616 181 aaPredicted RBP13.27□□□□□ -0.29
GPN3-201ENST00000228827 MAGEA12P43365 314 aa13.27□□□□□ -0.29
GPN3-201ENST00000228827 PIK3CGP48736 1102 aa13.27□□□□□ -0.29
GPN3-201ENST00000228827 CYB561P49447 251 aa13.27□□□□□ -0.29
GPN3-201ENST00000228827 SERPINB9P50453 376 aa13.27□□□□□ -0.29
GPN3-201ENST00000228827 RPS13P62277 151 aaKnown RBP13.27□□□□□ -0.29
GPN3-201ENST00000228827 PCDH1Q08174 1060 aa13.27□□□□□ -0.29
GPN3-201ENST00000228827 PCBP2Q15366 365 aaKnown RBP eCLIP13.27□□□□□ -0.29
GPN3-201ENST00000228827 CPSF6Q16630 551 aaKnown RBP eCLIP13.27□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms