RNA–Protein interactions for RNA: ENST00000216513.4

SIX4-201, Transcript of SIX homeobox 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SIX4, Length 6,285 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIX4-201ENST00000216513 GALK2Q01415 458 aa13.2□□□□□ -0.3
SIX4-201ENST00000216513 MRPL49Q13405 166 aaKnown RBP13.2□□□□□ -0.3
SIX4-201ENST00000216513 SF3B4Q15427 424 aaKnown RBP eCLIP13.2□□□□□ -0.3
SIX4-201ENST00000216513 ALKAL1Q6UXT8 129 aa13.2□□□□□ -0.3
SIX4-201ENST00000216513 Q6ZS52 159 aa13.2□□□□□ -0.3
SIX4-201ENST00000216513 ZDHHC14Q8IZN3 488 aa13.2□□□□□ -0.3
SIX4-201ENST00000216513 GSTK1Q9Y2Q3 226 aa13.2□□□□□ -0.3
SIX4-201ENST00000216513 C11orf98E9PRG8 122 aa13.2□□□□□ -0.3
SIX4-201ENST00000216513 CD63P08962 238 aa13.2□□□□□ -0.3
SIX4-201ENST00000216513 HMGCLP35914 325 aa13.2□□□□□ -0.3
SIX4-201ENST00000216513 SLC26A3P40879 764 aa13.2□□□□□ -0.3
SIX4-201ENST00000216513 UBE2NP61088 152 aaKnown RBP13.2□□□□□ -0.3
SIX4-201ENST00000216513 MINDY1Q8N5J2 469 aa13.2□□□□□ -0.3
SIX4-201ENST00000216513 NECAB3Q96P71 396 aaPredicted RBP13.2□□□□□ -0.3
SIX4-201ENST00000216513 EBF2Q9HAK2 575 aa13.2□□□□□ -0.3
SIX4-201ENST00000216513 DIABLOQ9NR28 239 aa13.2□□□□□ -0.3
SIX4-201ENST00000216513 ANKMY1Q9P2S6 941 aa13.2□□□□□ -0.3
SIX4-201ENST00000216513 A0A087WXM4 84 aa13.19□□□□□ -0.3
SIX4-201ENST00000216513 RDH16O75452 317 aa13.19□□□□□ -0.3
SIX4-201ENST00000216513 LYNP07948 512 aa13.19□□□□□ -0.3
SIX4-201ENST00000216513 ACSL1P33121 698 aa13.19□□□□□ -0.3
SIX4-201ENST00000216513 YPEL5P62699 121 aa13.19□□□□□ -0.3
SIX4-201ENST00000216513 SLC10A2Q12908 348 aaPredicted RBP13.19□□□□□ -0.3
SIX4-201ENST00000216513 KCNJ11Q14654 390 aa13.19□□□□□ -0.3
SIX4-201ENST00000216513 ISG20Q96AZ6 181 aaKnown RBP13.19□□□□□ -0.3
SIX4-201ENST00000216513 FIZ1Q96SL8 496 aa13.19□□□□□ -0.3
SIX4-201ENST00000216513 PKP4Q99569 1192 aa13.19□□□□□ -0.3
SIX4-201ENST00000216513 KCND1Q9NSA2 647 aa13.19□□□□□ -0.3
SIX4-201ENST00000216513 ERGIC3Q9Y282 383 aa13.19□□□□□ -0.3
SIX4-201ENST00000216513 NPHS1O60500 1241 aa13.19□□□□□ -0.3
SIX4-201ENST00000216513 CD9P21926 228 aa13.19□□□□□ -0.3
SIX4-201ENST00000216513 SGSHP51688 502 aa13.19□□□□□ -0.3
SIX4-201ENST00000216513 ABRAXAS2Q15018 415 aa13.19□□□□□ -0.3
SIX4-201ENST00000216513 UNC5DQ6UXZ4 953 aa13.19□□□□□ -0.3
SIX4-201ENST00000216513 PRR22Q8IZ63 422 aa13.19□□□□□ -0.3
SIX4-201ENST00000216513 MFRPQ9BY79 579 aa13.19□□□□□ -0.3
SIX4-201ENST00000216513 MRM3Q9HC36 420 aaKnown RBP13.19□□□□□ -0.3
SIX4-201ENST00000216513 TNRC6CQ9HCJ0 1690 aaKnown RBP13.19□□□□□ -0.3
SIX4-201ENST00000216513 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP13.19□□□□□ -0.3
SIX4-201ENST00000216513 CACNG3O60359 315 aa13.19□□□□□ -0.3
SIX4-201ENST00000216513 CH25HO95992 272 aa13.19□□□□□ -0.3
SIX4-201ENST00000216513 SERPINA3P01011 423 aa13.19□□□□□ -0.3
SIX4-201ENST00000216513 CEBPGP53567 150 aa13.19□□□□□ -0.3
SIX4-201ENST00000216513 GPR153Q6NV75 609 aa13.19□□□□□ -0.3
SIX4-201ENST00000216513 TMEM107Q6UX40 140 aa13.19□□□□□ -0.3
SIX4-201ENST00000216513 ZDHHC24Q6UX98 284 aa13.19□□□□□ -0.3
SIX4-201ENST00000216513 IQCKQ8N0W5 287 aa13.19□□□□□ -0.3
SIX4-201ENST00000216513 SFXN2Q96NB2 322 aa13.19□□□□□ -0.3
SIX4-201ENST00000216513 PELOQ9BRX2 385 aaKnown RBP13.19□□□□□ -0.3
SIX4-201ENST00000216513 ENTPD2Q9Y5L3 495 aa13.19□□□□□ -0.3
SIX4-201ENST00000216513 FADS2P1A8MWK0 482 aa13.19□□□□□ -0.3
SIX4-201ENST00000216513 CSN2P05814 226 aa13.19□□□□□ -0.3
SIX4-201ENST00000216513 OR1D4P47884 311 aa13.19□□□□□ -0.3
SIX4-201ENST00000216513 ADAM15Q13444 863 aa13.19□□□□□ -0.3
SIX4-201ENST00000216513 IL18R1Q13478 541 aa13.19□□□□□ -0.3
SIX4-201ENST00000216513 NXPE4Q6UWF7 544 aa13.19□□□□□ -0.3
SIX4-201ENST00000216513 B3GNT6Q6ZMB0 384 aa13.19□□□□□ -0.3
SIX4-201ENST00000216513 SLCO6A1Q86UG4 719 aa13.19□□□□□ -0.3
SIX4-201ENST00000216513 ZADH2Q8N4Q0 377 aa13.19□□□□□ -0.3
SIX4-201ENST00000216513 OR52B2Q96RD2 323 aa13.19□□□□□ -0.3
SIX4-201ENST00000216513 HOPXQ9BPY8 73 aaPredicted RBP13.19□□□□□ -0.3
SIX4-201ENST00000216513 CHCHD6Q9BRQ6 235 aa13.19□□□□□ -0.3
SIX4-201ENST00000216513 G6PC3Q9BUM1 346 aa13.19□□□□□ -0.3
SIX4-201ENST00000216513 GPC6Q9Y625 555 aaPredicted RBP13.19□□□□□ -0.3
SIX4-201ENST00000216513 PEX14O75381 377 aa13.18□□□□□ -0.3
SIX4-201ENST00000216513 TNFSF15O95150 251 aa13.18□□□□□ -0.3
SIX4-201ENST00000216513 PAPSS2O95340 614 aaPredicted RBP13.18□□□□□ -0.3
SIX4-201ENST00000216513 IGFBP5P24593 272 aa13.18□□□□□ -0.3
SIX4-201ENST00000216513 NR0B1P51843 470 aaKnown RBP13.18□□□□□ -0.3
SIX4-201ENST00000216513 SCAPQ12770 1279 aa13.18□□□□□ -0.3
SIX4-201ENST00000216513 CBX3Q13185 183 aa13.18□□□□□ -0.3
SIX4-201ENST00000216513 FAM131AQ6UXB0 335 aa13.18□□□□□ -0.3
SIX4-201ENST00000216513 ST6GALNAC1Q9NSC7 600 aaPredicted RBP13.18□□□□□ -0.3
SIX4-201ENST00000216513 KCND3Q9UK17 655 aa13.18□□□□□ -0.3
SIX4-201ENST00000216513 WDR45Q9Y484 360 aa13.18□□□□□ -0.3
SIX4-201ENST00000216513 LRP5O75197 1615 aa13.18□□□□□ -0.3
SIX4-201ENST00000216513 ZNF888P0CJ79 500 aaPredicted RBP13.18□□□□□ -0.3
SIX4-201ENST00000216513 F3P13726 295 aa13.18□□□□□ -0.3
SIX4-201ENST00000216513 CDH24Q86UP0 819 aa13.18□□□□□ -0.3
SIX4-201ENST00000216513 C2CD4AQ8NCU7 369 aaPredicted RBP13.18□□□□□ -0.3
SIX4-201ENST00000216513 OR4K1Q8NGD4 311 aa13.18□□□□□ -0.3
SIX4-201ENST00000216513 BORCS6Q96GS4 357 aa13.18□□□□□ -0.3
SIX4-201ENST00000216513 SLC29A3Q9BZD2 475 aa13.18□□□□□ -0.3
SIX4-201ENST00000216513 ZDHHC2Q9UIJ5 367 aa13.18□□□□□ -0.3
SIX4-201ENST00000216513 ENGP17813 658 aa13.18□□□□□ -0.3
SIX4-201ENST00000216513 MYL9P24844 172 aa13.18□□□□□ -0.3
SIX4-201ENST00000216513 ARMC3Q5W041 872 aa13.18□□□□□ -0.3
SIX4-201ENST00000216513 LMO3Q8TAP4 145 aa13.18□□□□□ -0.3
SIX4-201ENST00000216513 TMEM184CQ9NVA4 438 aa13.18□□□□□ -0.3
SIX4-201ENST00000216513 SCN7AQ01118 1682 aa13.18□□□□□ -0.3
SIX4-201ENST00000216513 TRBV11-1A0A0K0K1C0 115 aa13.18□□□□□ -0.3
SIX4-201ENST00000216513 GSTM4Q03013 218 aa13.18□□□□□ -0.3
SIX4-201ENST00000216513 KLHL26Q53HC5 615 aa13.18□□□□□ -0.3
SIX4-201ENST00000216513 OR4C11Q6IEV9 310 aa13.18□□□□□ -0.3
SIX4-201ENST00000216513 KLHDC8AQ8IYD2 350 aa13.18□□□□□ -0.3
SIX4-201ENST00000216513 TMEM203Q969S6 136 aa13.18□□□□□ -0.3
SIX4-201ENST00000216513 MACROD1Q9BQ69 325 aa13.18□□□□□ -0.3
SIX4-201ENST00000216513 CSTAP01040 98 aa13.18□□□□□ -0.3
SIX4-201ENST00000216513 NDUFV2P19404 249 aa13.18□□□□□ -0.3
SIX4-201ENST00000216513 RAB25P57735 213 aa13.18□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms