RNA–Protein interactions for RNA: ENST00000216038.5

RTCB-201, Transcript of RNA 2',3'-cyclic phosphate and 5'-OH ligase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RTCB, Length 2,027 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTCB-201ENST00000216038 STARD8Q92502 1023 aa9.48□□□□□ -0.89
RTCB-201ENST00000216038 RERGQ96A58 199 aaPredicted RBP9.48□□□□□ -0.89
RTCB-201ENST00000216038 APIPQ96GX9 242 aa9.48□□□□□ -0.89
RTCB-201ENST00000216038 MAELQ96JY0 434 aaKnown RBP9.48□□□□□ -0.89
RTCB-201ENST00000216038 CD180Q99467 661 aa9.48□□□□□ -0.89
RTCB-201ENST00000216038 CDC6Q99741 560 aa9.48□□□□□ -0.89
RTCB-201ENST00000216038 AICDAQ9GZX7 198 aa9.48□□□□□ -0.89
RTCB-201ENST00000216038 RHBGQ9H310 441 aa9.48□□□□□ -0.89
RTCB-201ENST00000216038 GIN1Q9NXP7 522 aa9.48□□□□□ -0.89
RTCB-201ENST00000216038 VPS29Q9UBQ0 182 aa9.48□□□□□ -0.89
RTCB-201ENST00000216038 APOBEC2Q9Y235 224 aaKnown RBP9.48□□□□□ -0.89
RTCB-201ENST00000216038 KLK4Q9Y5K2 254 aa9.48□□□□□ -0.89
RTCB-201ENST00000216038 AKAP13Q12802 2813 aa9.47□□□□□ -0.89
RTCB-201ENST00000216038 C4orf51C9J302 202 aa9.47□□□□□ -0.89
RTCB-201ENST00000216038 SLC28A1O00337 649 aa9.47□□□□□ -0.89
RTCB-201ENST00000216038 FOXE1O00358 373 aaPredicted RBP9.47□□□□□ -0.89
RTCB-201ENST00000216038 FOXD2O60548 495 aaPredicted RBP9.47□□□□□ -0.89
RTCB-201ENST00000216038 CNOT3O75175 753 aaKnown RBP9.47□□□□□ -0.89
RTCB-201ENST00000216038 FKBP9O95302 570 aa9.47□□□□□ -0.89
RTCB-201ENST00000216038 CAPNS1P04632 268 aa9.47□□□□□ -0.89
RTCB-201ENST00000216038 PIK3CBP42338 1070 aa9.47□□□□□ -0.89
RTCB-201ENST00000216038 PDX1P52945 283 aa9.47□□□□□ -0.89
RTCB-201ENST00000216038 DIO3P55073 304 aa9.47□□□□□ -0.89
RTCB-201ENST00000216038 RAB8AP61006 207 aa9.47□□□□□ -0.89
RTCB-201ENST00000216038 MYBPC1Q00872 1141 aa9.47□□□□□ -0.89
RTCB-201ENST00000216038 HYAL2Q12891 473 aa9.47□□□□□ -0.89
RTCB-201ENST00000216038 SQSTM1Q13501 440 aa9.47□□□□□ -0.89
RTCB-201ENST00000216038 CCNIQ14094 377 aa9.47□□□□□ -0.89
RTCB-201ENST00000216038 C6orf136Q5SQH8 315 aa9.47□□□□□ -0.89
RTCB-201ENST00000216038 ZNF362Q5T0B9 420 aaPredicted RBP9.47□□□□□ -0.89
RTCB-201ENST00000216038 IL23RQ5VWK5 629 aa9.47□□□□□ -0.89
RTCB-201ENST00000216038 DHRS13Q6UX07 377 aa9.47□□□□□ -0.89
RTCB-201ENST00000216038 RNF44Q7L0R7 432 aa9.47□□□□□ -0.89
RTCB-201ENST00000216038 ASPGQ86U10 573 aa9.47□□□□□ -0.89
RTCB-201ENST00000216038 SLITRK4Q8IW52 837 aa9.47□□□□□ -0.89
RTCB-201ENST00000216038 PQLC1Q8N2U9 271 aa9.47□□□□□ -0.89
RTCB-201ENST00000216038 DNAJC22Q8N4W6 341 aa9.47□□□□□ -0.89
RTCB-201ENST00000216038 DTWD1Q8N5C7 304 aa9.47□□□□□ -0.89
RTCB-201ENST00000216038 ZCCHC10Q8TBK6 192 aa9.47□□□□□ -0.89
RTCB-201ENST00000216038 PRPF18Q99633 342 aaKnown RBP9.47□□□□□ -0.89
RTCB-201ENST00000216038 C17orf62Q9BQA9 187 aa9.47□□□□□ -0.89
RTCB-201ENST00000216038 SARGQ9BW04 601 aa9.47□□□□□ -0.89
RTCB-201ENST00000216038 EBPLQ9BY08 206 aa9.47□□□□□ -0.89
RTCB-201ENST00000216038 MS4A8Q9BY19 250 aa9.47□□□□□ -0.89
RTCB-201ENST00000216038 PITHD1Q9GZP4 211 aaPredicted RBP9.47□□□□□ -0.89
RTCB-201ENST00000216038 REXO4Q9GZR2 422 aaKnown RBP9.47□□□□□ -0.89
RTCB-201ENST00000216038 NT5DC2Q9H857 520 aa9.47□□□□□ -0.89
RTCB-201ENST00000216038 RIC8BQ9NVN3 520 aa9.47□□□□□ -0.89
RTCB-201ENST00000216038 ARMCX1Q9P291 453 aa9.47□□□□□ -0.89
RTCB-201ENST00000216038 ANKMY1Q9P2S6 941 aa9.47□□□□□ -0.89
RTCB-201ENST00000216038 B3GNT3Q9Y2A9 372 aa9.47□□□□□ -0.89
RTCB-201ENST00000216038 POLR3HQ9Y535 204 aaPredicted RBP9.47□□□□□ -0.89
RTCB-201ENST00000216038 COL27A1Q8IZC6 1860 aaPredicted RBP9.47□□□□□ -0.89
RTCB-201ENST00000216038 LRIT2A6NDA9 550 aa9.46□□□□□ -0.89
RTCB-201ENST00000216038 TMEM150CB9EJG8 249 aa9.46□□□□□ -0.89
RTCB-201ENST00000216038 HYAL3O43820 417 aaPredicted RBP9.46□□□□□ -0.89
RTCB-201ENST00000216038 RFPL3O75679 317 aa9.46□□□□□ -0.89
RTCB-201ENST00000216038 ALDOCP09972 364 aaKnown RBP9.46□□□□□ -0.89
RTCB-201ENST00000216038 SLC35G6P0C7Q6 338 aa9.46□□□□□ -0.89
RTCB-201ENST00000216038 ATP6V1B1P15313 513 aa9.46□□□□□ -0.89
RTCB-201ENST00000216038 NAT1P18440 290 aa9.46□□□□□ -0.89
RTCB-201ENST00000216038 NELFEP18615 380 aaKnown RBP9.46□□□□□ -0.89
RTCB-201ENST00000216038 PTX3P26022 381 aaPredicted RBP9.46□□□□□ -0.89
RTCB-201ENST00000216038 AHRP35869 848 aa9.46□□□□□ -0.89
RTCB-201ENST00000216038 CPA2P48052 419 aa9.46□□□□□ -0.89
RTCB-201ENST00000216038 NME5P56597 212 aa9.46□□□□□ -0.89
RTCB-201ENST00000216038 CSTF3Q12996 717 aaKnown RBP9.46□□□□□ -0.89
RTCB-201ENST00000216038 TOR1AIP1Q5JTV8 583 aa9.46□□□□□ -0.89
RTCB-201ENST00000216038 PRAMEF17Q5VTA0 474 aa9.46□□□□□ -0.89
RTCB-201ENST00000216038 KHDRBS2Q5VWX1 349 aaKnown RBP9.46□□□□□ -0.89
RTCB-201ENST00000216038 PRSS42Q7Z5A4 293 aa9.46□□□□□ -0.89
RTCB-201ENST00000216038 SLCO6A1Q86UG4 719 aa9.46□□□□□ -0.89
RTCB-201ENST00000216038 IQCF2Q8IXL9 164 aa9.46□□□□□ -0.89
RTCB-201ENST00000216038 C1orf52Q8N6N3 182 aaKnown RBP9.46□□□□□ -0.89
RTCB-201ENST00000216038 CSNK1A1LQ8N752 337 aa9.46□□□□□ -0.89
RTCB-201ENST00000216038 TRIML2Q8N7C3 387 aa9.46□□□□□ -0.89
RTCB-201ENST00000216038 TRPV3Q8NET8 790 aa9.46□□□□□ -0.89
RTCB-201ENST00000216038 TTLQ8NG68 377 aa9.46□□□□□ -0.89
RTCB-201ENST00000216038 WDR48Q8TAF3 677 aa9.46□□□□□ -0.89
RTCB-201ENST00000216038 CMTM7Q96FZ5 175 aa9.46□□□□□ -0.89
RTCB-201ENST00000216038 SLC41A2Q96JW4 573 aa9.46□□□□□ -0.89
RTCB-201ENST00000216038 CLPTM1LQ96KA5 538 aa9.46□□□□□ -0.89
RTCB-201ENST00000216038 GPATCH1Q9BRR8 931 aaKnown RBP9.46□□□□□ -0.89
RTCB-201ENST00000216038 ZNF768Q9H5H4 540 aaKnown RBP9.46□□□□□ -0.89
RTCB-201ENST00000216038 BRF2Q9HAW0 419 aa9.46□□□□□ -0.89
RTCB-201ENST00000216038 LRTM1Q9HBL6 345 aa9.46□□□□□ -0.89
RTCB-201ENST00000216038 ATAD3AQ9NVI7 634 aa9.46□□□□□ -0.89
RTCB-201ENST00000216038 C1orf109Q9NX04 203 aa9.46□□□□□ -0.89
RTCB-201ENST00000216038 MRPS2Q9Y399 296 aaKnown RBP9.46□□□□□ -0.89
RTCB-201ENST00000216038 AP4B1Q9Y6B7 739 aa9.46□□□□□ -0.89
RTCB-201ENST00000216038 PLPP1O14494 284 aa9.46□□□□□ -0.9
RTCB-201ENST00000216038 ERI3O43414 337 aaKnown RBP9.46□□□□□ -0.9
RTCB-201ENST00000216038 CLEC3AO75596 197 aa9.46□□□□□ -0.9
RTCB-201ENST00000216038 OXSR1O95747 527 aaPredicted RBP9.46□□□□□ -0.9
RTCB-201ENST00000216038 LBPP18428 481 aa9.46□□□□□ -0.9
RTCB-201ENST00000216038 TTKP33981 857 aa9.46□□□□□ -0.9
RTCB-201ENST00000216038 GABRA4P48169 554 aa9.46□□□□□ -0.9
RTCB-201ENST00000216038 ENTPD1P49961 510 aa9.46□□□□□ -0.9
RTCB-201ENST00000216038 INSM1Q01101 510 aaPredicted RBP9.46□□□□□ -0.9
RTCB-201ENST00000216038 FOXM1Q08050 763 aa9.46□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms