RNA–Protein interactions for RNA: ENSMUST00000030992.12

Rnf4-201, Transcript of E3 ubiquitin-protein ligase RNF4, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Rnf4, Length 2,895 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf4-201ENSMUST00000030992 Vmn1r30Q8R2D2 302 aa12.18□□□□□ -0.46
Rnf4-201ENSMUST00000030992 Cdt1Q8R4E9 557 aa12.18□□□□□ -0.46
Rnf4-201ENSMUST00000030992 Olfr315Q8VFG7 309 aa12.18□□□□□ -0.46
Rnf4-201ENSMUST00000030992 Olfr1033Q8VFK5 310 aa12.18□□□□□ -0.46
Rnf4-201ENSMUST00000030992 FopnlQ9CZS3 174 aa12.18□□□□□ -0.46
Rnf4-201ENSMUST00000030992 Adam25Q9R159 760 aa12.18□□□□□ -0.46
Rnf4-201ENSMUST00000030992 Dyrk1bQ9Z188 629 aa12.18□□□□□ -0.46
Rnf4-201ENSMUST00000030992 Chd3B1AR17 2055 aa12.18□□□□□ -0.46
Rnf4-201ENSMUST00000030992 Trpm6Q8CIR4 2028 aa12.17□□□□□ -0.46
Rnf4-201ENSMUST00000030992 Zfp811A0A0J9YU71 552 aa12.17□□□□□ -0.46
Rnf4-201ENSMUST00000030992 Itga10E9Q6R1 1167 aa12.17□□□□□ -0.46
Rnf4-201ENSMUST00000030992 Klk1b16P04071 261 aa12.17□□□□□ -0.46
Rnf4-201ENSMUST00000030992 C1qbP14106 253 aa12.17□□□□□ -0.46
Rnf4-201ENSMUST00000030992 Hnrnpa1P49312 320 aaKnown RBP12.17□□□□□ -0.46
Rnf4-201ENSMUST00000030992 Satb1Q60611 764 aa12.17□□□□□ -0.46
Rnf4-201ENSMUST00000030992 Fstl1Q62356 306 aa12.17□□□□□ -0.46
Rnf4-201ENSMUST00000030992 Egfl8Q6GUQ1 293 aa12.17□□□□□ -0.46
Rnf4-201ENSMUST00000030992 Q6P2K3 674 aa12.17□□□□□ -0.46
Rnf4-201ENSMUST00000030992 Galnt2Q6PB93 570 aa12.17□□□□□ -0.46
Rnf4-201ENSMUST00000030992 Peli2Q8BST6 419 aa12.17□□□□□ -0.46
Rnf4-201ENSMUST00000030992 RorbQ8R1B8 470 aa12.17□□□□□ -0.46
Rnf4-201ENSMUST00000030992 Vmn1r206Q8R277 312 aa12.17□□□□□ -0.46
Rnf4-201ENSMUST00000030992 Defb35Q8R2I3 63 aa12.17□□□□□ -0.46
Rnf4-201ENSMUST00000030992 Cd207Q8VBX4 331 aa12.17□□□□□ -0.46
Rnf4-201ENSMUST00000030992 Zfyve21Q8VCM3 234 aa12.17□□□□□ -0.46
Rnf4-201ENSMUST00000030992 Yif1bQ9CX30 311 aa12.17□□□□□ -0.46
Rnf4-201ENSMUST00000030992 Twist2Q9D030 160 aa12.17□□□□□ -0.46
Rnf4-201ENSMUST00000030992 Dnase1l2Q9D1G0 278 aa12.17□□□□□ -0.46
Rnf4-201ENSMUST00000030992 Grb14Q9JLM9 538 aa12.17□□□□□ -0.46
Rnf4-201ENSMUST00000030992 Arpc3Q9JM76 178 aaKnown RBP12.17□□□□□ -0.46
Rnf4-201ENSMUST00000030992 Gm15013V9GWY0 266 aa12.17□□□□□ -0.46
Rnf4-201ENSMUST00000030992 PtprsB0V2N1 1907 aa12.17□□□□□ -0.46
Rnf4-201ENSMUST00000030992 Fam136b-psA0A140T8T1 138 aa12.17□□□□□ -0.46
Rnf4-201ENSMUST00000030992 Acnat1A2AKK5 416 aa12.17□□□□□ -0.46
Rnf4-201ENSMUST00000030992 Pou1f1Q00286 291 aa12.17□□□□□ -0.46
Rnf4-201ENSMUST00000030992 Rbbp4Q60972 425 aa12.17□□□□□ -0.46
Rnf4-201ENSMUST00000030992 Ppp1r14bQ62084 147 aa12.17□□□□□ -0.46
Rnf4-201ENSMUST00000030992 Sec24dQ6NXL1 1032 aa12.17□□□□□ -0.46
Rnf4-201ENSMUST00000030992 PianpQ6P1B3 278 aa12.17□□□□□ -0.46
Rnf4-201ENSMUST00000030992 Olfr1307Q7TQX1 312 aa12.17□□□□□ -0.46
Rnf4-201ENSMUST00000030992 Olfr384Q7TRX8 312 aa12.17□□□□□ -0.46
Rnf4-201ENSMUST00000030992 Prr5Q812A5 387 aa12.17□□□□□ -0.46
Rnf4-201ENSMUST00000030992 Eme1Q8BJW7 570 aa12.17□□□□□ -0.46
Rnf4-201ENSMUST00000030992 Spon2Q8BMS2 330 aa12.17□□□□□ -0.46
Rnf4-201ENSMUST00000030992 Phf11aQ8BVM9 293 aa12.17□□□□□ -0.46
Rnf4-201ENSMUST00000030992 Slc8a2Q8K596 921 aa12.17□□□□□ -0.46
Rnf4-201ENSMUST00000030992 Olfr1302Q8VGE9 315 aa12.17□□□□□ -0.46
Rnf4-201ENSMUST00000030992 Vmn1r69Q8VIC1 319 aa12.17□□□□□ -0.46
Rnf4-201ENSMUST00000030992 Upk3bl1Q9D701 249 aa12.17□□□□□ -0.46
Rnf4-201ENSMUST00000030992 Timm50Q9D880 353 aa12.17□□□□□ -0.46
Rnf4-201ENSMUST00000030992 Mcemp1Q9D8U6 183 aa12.17□□□□□ -0.46
Rnf4-201ENSMUST00000030992 Aph1cQ9DCZ9 258 aa12.17□□□□□ -0.46
Rnf4-201ENSMUST00000030992 AgtrapQ9WVK0 161 aa12.17□□□□□ -0.46
Rnf4-201ENSMUST00000030992 Trav1A0A075B5Z4 110 aa12.16□□□□□ -0.46
Rnf4-201ENSMUST00000030992 Olfr1215A3KGY3 312 aa12.16□□□□□ -0.46
Rnf4-201ENSMUST00000030992 HpnO35453 436 aa12.16□□□□□ -0.46
Rnf4-201ENSMUST00000030992 Stk16O88697 305 aa12.16□□□□□ -0.46
Rnf4-201ENSMUST00000030992 Akap3O88987 864 aa12.16□□□□□ -0.46
Rnf4-201ENSMUST00000030992 Dbx1P52950 335 aa12.16□□□□□ -0.46
Rnf4-201ENSMUST00000030992 Pcbp3P57722 371 aaKnown RBP12.16□□□□□ -0.46
Rnf4-201ENSMUST00000030992 Vipr1P97751 459 aa12.16□□□□□ -0.46
Rnf4-201ENSMUST00000030992 Cd80Q00609 306 aa12.16□□□□□ -0.46
Rnf4-201ENSMUST00000030992 Col19a1Q0VF58 1136 aa12.16□□□□□ -0.46
Rnf4-201ENSMUST00000030992 Fam109bQ14B98 259 aa12.16□□□□□ -0.46
Rnf4-201ENSMUST00000030992 Olfr681Q3SXH8 315 aa12.16□□□□□ -0.46
Rnf4-201ENSMUST00000030992 Tmem199Q5SYH2 208 aa12.16□□□□□ -0.46
Rnf4-201ENSMUST00000030992 Ugt2b34Q8K154 532 aa12.16□□□□□ -0.46
Rnf4-201ENSMUST00000030992 Olfr353Q8VGK0 311 aa12.16□□□□□ -0.46
Rnf4-201ENSMUST00000030992 Olfr679Q8VGV0 315 aa12.16□□□□□ -0.46
Rnf4-201ENSMUST00000030992 Acsl6Q91WC3 697 aa12.16□□□□□ -0.46
Rnf4-201ENSMUST00000030992 GrifinQ9D1U0 144 aa12.16□□□□□ -0.46
Rnf4-201ENSMUST00000030992 Atp5oQ9DB20 213 aaKnown RBP12.16□□□□□ -0.46
Rnf4-201ENSMUST00000030992 Hapln1Q9QUP5 356 aaKnown RBP12.16□□□□□ -0.46
Rnf4-201ENSMUST00000030992 Fads2Q9Z0R9 444 aaKnown RBP12.16□□□□□ -0.46
Rnf4-201ENSMUST00000030992 Anapc1P53995 1944 aaKnown RBP12.16□□□□□ -0.46
Rnf4-201ENSMUST00000030992 Btbd35f16A0A087WSN2 498 aa12.16□□□□□ -0.46
Rnf4-201ENSMUST00000030992 Mup18A2BIM8 181 aa12.16□□□□□ -0.46
Rnf4-201ENSMUST00000030992 Zfp808B8JJZ4 753 aa12.16□□□□□ -0.46
Rnf4-201ENSMUST00000030992 Gm10608E9PZ13 166 aa12.16□□□□□ -0.46
Rnf4-201ENSMUST00000030992 Gm14139F6ZS36 494 aa12.16□□□□□ -0.46
Rnf4-201ENSMUST00000030992 Serpinb9eO08806 377 aa12.16□□□□□ -0.46
Rnf4-201ENSMUST00000030992 NsmafO35242 920 aa12.16□□□□□ -0.46
Rnf4-201ENSMUST00000030992 Pld3O35405 488 aa12.16□□□□□ -0.46
Rnf4-201ENSMUST00000030992 H2-AaP01910 256 aa12.16□□□□□ -0.46
Rnf4-201ENSMUST00000030992 Mup11P04938 181 aa12.16□□□□□ -0.46
Rnf4-201ENSMUST00000030992 Ca8P28651 291 aa12.16□□□□□ -0.46
Rnf4-201ENSMUST00000030992 Hsf2P38533 535 aa12.16□□□□□ -0.46
Rnf4-201ENSMUST00000030992 Acod1P54987 488 aa12.16□□□□□ -0.46
Rnf4-201ENSMUST00000030992 NcanP55066 1268 aa12.16□□□□□ -0.46
Rnf4-201ENSMUST00000030992 Rab8bP61028 207 aa12.16□□□□□ -0.46
Rnf4-201ENSMUST00000030992 Defb23Q30KP0 166 aa12.16□□□□□ -0.46
Rnf4-201ENSMUST00000030992 Gpr165Q3V3A3 455 aa12.16□□□□□ -0.46
Rnf4-201ENSMUST00000030992 C1orf109Q499E6 217 aa12.16□□□□□ -0.46
Rnf4-201ENSMUST00000030992 Gm21320Q4FZE8 181 aa12.16□□□□□ -0.46
Rnf4-201ENSMUST00000030992 Glt8d2Q640P4 349 aa12.16□□□□□ -0.46
Rnf4-201ENSMUST00000030992 Elfn2Q68FM6 823 aa12.16□□□□□ -0.46
Rnf4-201ENSMUST00000030992 PapolgQ6PCL9 739 aa12.16□□□□□ -0.46
Rnf4-201ENSMUST00000030992 SynpoQ8CC35 929 aaKnown RBP12.16□□□□□ -0.46
Rnf4-201ENSMUST00000030992 Ccm2Q8K2Y9 453 aa12.16□□□□□ -0.46
Rnf4-201ENSMUST00000030992 Trim31Q8R0K2 507 aa12.16□□□□□ -0.46
Retrieved 100 of 22,080 RNA–protein pairs in 25.2 ms